Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0243 ATGGGCAACGAACCGAACAAAGGCAAGAAGCCCCTCCTAGCCATGGAGATGCAGCAGCTTCTGAGTATGGGGTTCCCGGATGAGCTAGCAGCCGAAGCCCTAGCTGCAACTGGCGGCAAATCCACCACTAAAGCCACCGAATGGATCTTAAACCACAAAGCCACTTCTTCTAACCATGTCTCTAATTCAAACCCTTCTCCAGTTCAGCCTAGACTCGATCGCTTTTTTCCGTTTCAATCCAAACCCTCTTCTACAGTCACAGCTTCATCACAAGGAATTCAACAAGAGCAAGAAGATGCAGATTTAGATTTAGAAGAATTAACCCCAAACGTTAATCCGCCATCCAAACGTCTCAAACTTTCACCGTCTAACACCAAACCCGCCTCTCCTGTCTTTCTGAATCATTTTCGTAGTCACAAGAGTGCTGATAATGCTTCTAAATCCAAAGCCCACGAGCCCTTATATGAGCGAATGCGTCCCAGAAACATTGATGATGTTATCGGTCAGGACCATTTGGTTGCTTCTAATTCGCTCCTTCGCTCCGCAATTGAACGCGGCCGTCTCCCTTCCATCATATTCTGGGGTCCTCCTGGTACAGGTAAGACCTCTATTGCTAAAGCCATTGTTAAGTCAGCAAGTTCTTATGAGAAACAACAATGCCCCTCTTATCGCTTTGTTTCGTTATCTGCTGTGACTAGTGGTGTTAAAGATGTGAGGGATGCGGTTGATGAGGCTAGGAAATTGAGAGCTAAGTGTAATCAAAGAACTGTTCTTTTTGTGGATGAGGTTCACAGGTTTAACAAGTCTCAACAGGACTCTTTTTTGCCTGTTATTGAAGATGGAAGTATTGTCTTCGTTGGAGCCACTACTGAAAACCCTTCCTTCCATTTGATTACACCATTGCTATCTCGGTGCCTTGTACTTACCCTAAACCCCTTGAAACCCCACCATGTTGAGATGATTCTAAAGAGAGCTTTGAATAATCTGGACAAAGGATTGGGGCAAAGCATTGGTTTACAAGTTGATGTACCTGAAGATGTAATTAGTTTTATAGCTAACAATTGTGATGGTGATGCTCGGGTGGCATTGAATGCATTGGAAATTTCAGCTGTTACAGCAGCTGCTCGGTTACAAGATGATAAGAAATCTGAGGATGTCAAAGAAACAGAAGGCGTGGATGGTCAAATAAACCAAGAAAATAGAGCTGGTTCATCTCTTAATATTGTTACCCTGGATGATGCAAAAGAGGCGCTTCAGTGCAAGCACCTTGCTTATGATAAAGCTGGGGAAGAGCACTATAATCTAATTAGTGCATTGCACAAATCAATGAGGGGAAATGATGCTAATGCGGCAATTTATTGGTTGGCAAGAATGTTGGAAGGAGGAGAAGAGCCTCTTTACATTGCGCGGAGATTGATAAGGTTTGCAAGTGAGGACATTGGGTTGGCTAATCCGGCTGCTCTCAATCAGGCTGTTTCATGTTACCAGGCCTGCCACTTCTTGGGTATGCCTGAGTGCAATGTAATTCTTGCACAGTGTGTTGCTTATTTGGCCTTAGCTCCTAAATCAATTGCTGTATATCGAGCAATGCAAGCTGCTCAGAAGGTCATCAAGGAATCAGTTGGACAGAATGAGGGAGTGCCTCTTCATCTAAGAAATGCACCGACTAAACTAATGAAGGAACTTGGCTACGGGAAGGGATACATATACACTCCTGATAATCCTTCTTTGACCCAGGACTACTTACCACCCTCACTAAATGGGTACAAGTTCCTTGATTGGCCTGACAGGAATACCTCTAACTGA 1806 0.4413 MGNEPNKGKKPLLAMEMQQLLSMGFPDELAAEALAATGGKSTTKATEWILNHKATSSNHVSNSNPSPVQPRLDRFFPFQSKPSSTVTASSQGIQQEQEDADLDLEELTPNVNPPSKRLKLSPSNTKPASPVFLNHFRSHKSADNASKSKAHEPLYERMRPRNIDDVIGQDHLVASNSLLRSAIERGRLPSIIFWGPPGTGKTSIAKAIVKSASSYEKQQCPSYRFVSLSAVTSGVKDVRDAVDEARKLRAKCNQRTVLFVDEVHRFNKSQQDSFLPVIEDGSIVFVGATTENPSFHLITPLLSRCLVLTLNPLKPHHVEMILKRALNNLDKGLGQSIGLQVDVPEDVISFIANNCDGDARVALNALEISAVTAAARLQDDKKSEDVKETEGVDGQINQENRAGSSLNIVTLDDAKEALQCKHLAYDKAGEEHYNLISALHKSMRGNDANAAIYWLARMLEGGEEPLYIARRLIRFASEDIGLANPAALNQAVSCYQACHFLGMPECNVILAQCVAYLALAPKSIAVYRAMQAAQKVIKESVGQNEGVPLHLRNAPTKLMKELGYGKGYIYTPDNPSLTQDYLPPSLNGYKFLDWPDRNTSN 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0243 601 MobiDBLite consensus disorder prediction 56 96 - -
Acco10g0243 601 SMART uba_6 13 51 IPR015940 -
Acco10g0243 601 Pfam ATPase family associated with various cellular activities (AAA) 191 307 IPR003959 GO:0005524|GO:0016887
Acco10g0243 601 FunFam Replication-associated recombination protein A 145 312 - -
Acco10g0243 601 FunFam AAA-type ATPase family protein 313 389 - -
Acco10g0243 601 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 6 52 IPR015940 -
Acco10g0243 601 Gene3D - 313 388 - -
Acco10g0243 601 FunFam Putative AAA family ATPase 419 522 - -
Acco10g0243 601 MobiDBLite consensus disorder prediction 78 96 - -
Acco10g0243 601 Gene3D - 419 522 - -
Acco10g0243 601 SUPERFAMILY post-AAA+ oligomerization domain-like 429 598 IPR008921 GO:0003677|GO:0006260
Acco10g0243 601 PANTHER WERNER HELICASE-INTERACTING PROTEIN 1 FAMILY MEMBER 15 599 - -
Acco10g0243 601 Pfam MgsA AAA+ ATPase C terminal 445 594 IPR021886 -
Acco10g0243 601 Gene3D - 13 65 - -
Acco10g0243 601 CDD HLD_clamp_RarA 313 374 - -
Acco10g0243 601 Gene3D - 523 601 - -
Acco10g0243 601 Pfam UBA/TS-N domain 18 49 IPR015940 -
Acco10g0243 601 SMART AAA_5 187 313 IPR003593 GO:0016887
Acco10g0243 601 SUPERFAMILY UBA-like 17 53 IPR009060 GO:0005515
Acco10g0243 601 Coils Coil 235 255 - -
Acco10g0243 601 MobiDBLite consensus disorder prediction 106 125 - -
Acco10g0243 601 Pfam AAA C-terminal domain 340 444 IPR032423 -
Acco10g0243 601 CDD AAA 167 305 - -
Acco10g0243 601 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 385 IPR027417 -
Acco10g0243 601 Gene3D - 140 311 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0243 Acco-ChrAcco10 5894769 5897489 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0243 149 367 Core DNA Replication Machinery Family AT1G21690 24.887 3.40e-10 60.1