Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0239 ATGTATTCATCGACGCAGTCGGGTCATATAATAAATAGTAAGAACATGGCGAAAAGTCCTGATTATTCAGATCCACTCAGATGGGGGGAGGCAGCAGACTCACTCAAGAGAAGCCACTTGGATGAAGTGAGAGCCATGGCGGCTGATTACCGGAGGGCCGTCGTCCATCTGGGCAGCACGTGGCTGTCGATTTCACAGGTGGCGGCGGTGGCTAACCTCAGCGCCGACGTGAAGGTGGTGCTATCGGAGTCAGCGAGGGCCGGCGTGAAGGCGAGCACTGATTGGATAATGGAAGGCGCCAAGAATGGGACTCCCATTTACGGTGTCACCACTGGCTTTGGTGCTAATTCTCACAAGCGAACCGATCAAGTCGCTGCTCTTCAAAAGGAGCTTGTGAGATTCTTAAACTGTGCAATATTCGACAAGGGAAAAGACATGAGACACACTCTGTCTCAGGCTGCAAGCAGAGCAGCAATGCTAGTGAGGGTGAACACTCTTCTTCAAGGCTACTCAGGCATTCGTTTTGAGATGTTAGAAGCAATCACCAAACTGCTCAACCACAACGTCACTCCTTGCTTGCCCCTCCGCGGCACCGTCACCGCTTCCGGCGACCTCATCCCTCTTTCCTACATTCTTGCTTTGCTTGTTGGTCGCCCTAACTCACAGGCCATTGGACCTTCTGGGGAGTTCCTTACTCCTAATCAAGCTTTCCTCCTCGCCGGCATCAATGCCCACCATACCACTACAGATGATGAGGTAGACACGGACAGCGGTGGGTCCCACGAGGAGAAGGTCAAGTTCTTTGAATTGCAGCCAAAGGAAGGCCTTGCTATTGTAAACGGCACAGCCGTTGGATCTGGATTGGCTTCGGTGGTGCTTTTTGAAGCAAACGTCTTAGCTTTACTGTCACAAGTTACATCTGCCATTTTTGCTGAAGTAATGCATGCCAAACCAGAATTCACCCGCCACATGATTCACAACCTTAAGCACCATCCTGGTCAGATAGAAGCAGCTGCAATTATGGAACACATTCTAGAAGGTAGCTCTTATGTGAAGCAATATCCTCAGAAATCACTAAAGTTCAAGAAAGAACGATACGCTCTTATAACTTCCCCTCAATGGCTTGGACCACAGATTGAAGTCATCAGATATTCCACAAAGTCCATTGAGAGGGAGATTAACTCTGTGAATGACAATCCTTTAATTGACGTTTCAAGTAACAAGGCTTTAAATGGTGGTAACTTCCAAGGCACACCCATTGGAGTTTCAATGGACAACACGCGTTTAGCTGTGGCTTCCATAGGAAAACTTGTGTTTGCACAGTTCACTGAGCTAGTAATCGACATGTACAACAATGGGTTGCCTTCTAATCTTTCTGCTTCTAGAAACCCAAGCTTGGATTATGGCTTTAAGGCTTGTGAAGTTGCTATGGCCTCTTACTGTTCTGAGCTTCAGTTTTTGGCAAATCCGGTGACCAATCACGTGCAAAGTGCAGAACATCACAACCAAGATGTGAACTCTTTGGGTCTAATTTCTGCCAGAAAAACCAGTGAGGCTATTGAGATCTTGAAGCTAATGTGCTCAACTTATTTGGCTGCACTATGCCAAGCTATTGACCTTAGGCACCTGGAAGAAATCTTCATTATCACTGTGAAAGACACTATAAGCCAAGTTACCAAAAAGATATTCCCATCCACAGATCAAAACCCATTTCCACACTGTGAAGAGGATTTACTTAAAGTGGTCGATAACGAGTATGTGTTTTCCTACATTGATAATCCCTTCAATGCTTCATACCCATTCATGCCAAAATTGAAACAGGTTCTTTATGAGAAGGCACACAAGAATGCTGTGAAAGAGAGGAATAATAATAATAATGTGAACAGTAGTGGTGCTTCAGCTTTTGAGAAGATTGAGGACTTTGAGGAAGAACTTAAGCTTGTTTTGCCAAAGGAAGTTGAAAGGGCAAGGTTGGATTATGAGAATGGCAAGCCAGCAATTCCAAATAGGATTAAGGAGTGTAGGTCATACCCATTATACAAGTTTGTGAGGGAAGAGTTGAACACTGGGTTGCTTAGTGGGGAGAAGATCAAGTCACCTGATGAGGACTTTGATAAAGTGTTTAGAGCAATTTGTGAAGCAAGGATTGTTGATCCACTTTTGGAGTGCCTTGCAGATTGGAAAGGAGTTCCAATTTCAATGTAA 2205 0.4535 MYSSTQSGHIINSKNMAKSPDYSDPLRWGEAADSLKRSHLDEVRAMAADYRRAVVHLGSTWLSISQVAAVANLSADVKVVLSESARAGVKASTDWIMEGAKNGTPIYGVTTGFGANSHKRTDQVAALQKELVRFLNCAIFDKGKDMRHTLSQAASRAAMLVRVNTLLQGYSGIRFEMLEAITKLLNHNVTPCLPLRGTVTASGDLIPLSYILALLVGRPNSQAIGPSGEFLTPNQAFLLAGINAHHTTTDDEVDTDSGGSHEEKVKFFELQPKEGLAIVNGTAVGSGLASVVLFEANVLALLSQVTSAIFAEVMHAKPEFTRHMIHNLKHHPGQIEAAAIMEHILEGSSYVKQYPQKSLKFKKERYALITSPQWLGPQIEVIRYSTKSIEREINSVNDNPLIDVSSNKALNGGNFQGTPIGVSMDNTRLAVASIGKLVFAQFTELVIDMYNNGLPSNLSASRNPSLDYGFKACEVAMASYCSELQFLANPVTNHVQSAEHHNQDVNSLGLISARKTSEAIEILKLMCSTYLAALCQAIDLRHLEEIFIITVKDTISQVTKKIFPSTDQNPFPHCEEDLLKVVDNEYVFSYIDNPFNASYPFMPKLKQVLYEKAHKNAVKERNNNNNVNSSGASAFEKIEDFEEELKLVLPKEVERARLDYENGKPAIPNRIKECRSYPLYKFVREELNTGLLSGEKIKSPDEDFDKVFRAICEARIVDPLLECLADWKGVPISM 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0239 734 Pfam Aromatic amino acid lyase 62 543 IPR001106 -
Acco10g0239 734 MobiDBLite consensus disorder prediction 1 22 - -
Acco10g0239 734 NCBIfam phenylalanine ammonia-lyase 24 724 IPR005922 GO:0005737|GO:0006559|GO:0016841
Acco10g0239 734 Gene3D Fumarase/aspartase (Central domain) 283 729 - -
Acco10g0239 734 MobiDBLite consensus disorder prediction 1 19 - -
Acco10g0239 734 SUPERFAMILY L-aspartase-like 24 732 IPR008948 GO:0003824
Acco10g0239 734 FunFam Phenylalanine ammonia-lyase 15 282 - -
Acco10g0239 734 Gene3D - 15 282 IPR024083 -
Acco10g0239 734 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 197 213 IPR022313 GO:0016841
Acco10g0239 734 Gene3D - 544 669 IPR023144 -
Acco10g0239 734 PANTHER HISTIDINE AMMONIA-LYASE 264 733 IPR001106 -
Acco10g0239 734 CDD PAL-HAL 60 541 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0239 Acco-ChrAcco10 5819616 5824308 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0239 8 732 Monolignol Biosynthesis Gene Families AT2G37040 64.986 0.0 970