Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco10g0215 | ATGTTCACAACAGTGGGAGAGGAAAGTTCGGGTAATTTTCAAATCATTCTCGGTCAGACTTCTAGTTTAGAGCTCAATGGATTCTCTCTCATCTTCATTGATTGTTTGCCATTTTTGCATATTGGGTTATTTGGTGTTGTGAACGATGAGTCTTCTTTCAGCGTTCTGAAGTTCTTCGGCCAAATTCTTCCTTCTCTGTTCTGTGTGAGGTGCTGGTGTATGTGCAGTATTCTCCATATTATCCTTAGCTATATTTTCAATATGGAAACTGACAGTTCTGACGTCTCAAAGGCTGAAGAATTCAAAGTTCTTGCAAACGAAGCATTCAATGCTCGCAAATATGCCCAAGCTATTGATTTATATAGTCAAGCAATTGAAATGAACAGTCGAAATGCTGTTTACTGGGCCAATCGTGCCTTTGCACATCTTAAGCTTGAGGAATATGGTAGTGCAATACAAGATGCTGCAAAGGCGATTGAAGTTGATCCTAAATATTCAAAGGGTTACTACAGACGAGGCGCTGCCCATCTTGCCATGGGGAAATTCAAGGAAGCTCTGAAGGATTTTCAACAGGTCAAGAAAATGTGCCCAAATGATCCTGATGCAGGAAAGAAATTAAAGGAATGTGAAAAGGCAGTTATGAAGCTCAAATTTGAAGAAGCAATTTCTGCACCAGATGCTGAAAGGCGTTCAGTAGCTGAATCCATAGATTTCCGTTCTATAGGAAAGGGTCACAATTCTTTGATGCCCACCGAATTGGCCATAGCAGCAGTGACAGTAGCAGTTATGGCAGCAGTTGTCATGTTGTTCAGGACGTCGGAGGCCACAATAGTAGCTGCAGTTGTGGTTGGTCTGCTGTTGCTTTTTGGGGCATATTGGTGGAGTAGCTACAGTGCTGGTATAATTAGCAGGAGTGATTTGCATGACCTAGATGTGGAGCCACAATACTCAGGAGCAAGAATAGAGGGGGATGTTGTTACTTTGGATTTTGTGAAAAAAATGATGGATGATTTTAAGAATCAAAAGTGCCTACATAAAAGGTACGCCTACCAAATTGTATTGCAAACAAGAGAGATGTTGTTGGCCTTGCCTCCTCTTGTTGATGTAAATGTTCCTGATGGCAATCATTTCACTGTTTGTGGTGATGTGCATGGTCAGTACTACGATCTCTTAAATATCTTTGAGCTTAATGGGCTTCCTTCAGAAGAGAATCCATACCTTTTTAATGGTGACTTTGTGGATAGAGGATCTTTTTCACTGGAAGTCATCTTTACTTTGTTTGCATTCAAGTGCATGTCTCCTTCAGCCATATATCTAGCTAGAGGGAATCATGAGAGCAAGAGCATGAACAAGATATATGGTTTTGAGGGTGAGGTCCGCTCAAAGTTAAGCGACACATTTGTGGAACTATTTGCAGAAGTTTTCTGCTGTTTACCTTTGGCTCATGTGATAAACGGGAAGGTTTTTGTGGTTCATGGAGGTCTTTTTAGTGTTGATGGGGTCAAACTCTCTGACATTAGAGCAATTAACAGATTTTGTGAGCCTCCGGAAGAAGGATTGATGTGTGAATTACTATGGAGTGATCCACAACCTCTTCCTGGAAGGGGCCCAAGCAAGCGTGGTGTGGGTCTTTCTTTCGGCCCAGATGTGACAAAAAGTTTCTTGCAGGAAAATAATTTAGAGTTAATTGTCAGATCTCATGAAGTAAAGGATGAGGGTTATGAGATTGAGCATGATGGTAAACTCATAACTGTATTCTCTGCTCCAAATTACTGTGACCAGATGGGTAACAAAGGTGCATTTATTCGGTTTGAAGCACCAGATTTGAAGCCAAACATTGTTACCTACTCCGCAGTGCCACACCCGGATGTGAAGCCAATGGCTTATGCAAACAACTTTCTTCGGATGTTCTCATAA | 1917 | 0.4142 | MFTTVGEESSGNFQIILGQTSSLELNGFSLIFIDCLPFLHIGLFGVVNDESSFSVLKFFGQILPSLFCVRCWCMCSILHIILSYIFNMETDSSDVSKAEEFKVLANEAFNARKYAQAIDLYSQAIEMNSRNAVYWANRAFAHLKLEEYGSAIQDAAKAIEVDPKYSKGYYRRGAAHLAMGKFKEALKDFQQVKKMCPNDPDAGKKLKECEKAVMKLKFEEAISAPDAERRSVAESIDFRSIGKGHNSLMPTELAIAAVTVAVMAAVVMLFRTSEATIVAAVVVGLLLLFGAYWWSSYSAGIISRSDLHDLDVEPQYSGARIEGDVVTLDFVKKMMDDFKNQKCLHKRYAYQIVLQTREMLLALPPLVDVNVPDGNHFTVCGDVHGQYYDLLNIFELNGLPSEENPYLFNGDFVDRGSFSLEVIFTLFAFKCMSPSAIYLARGNHESKSMNKIYGFEGEVRSKLSDTFVELFAEVFCCLPLAHVINGKVFVVHGGLFSVDGVKLSDIRAINRFCEPPEEGLMCELLWSDPQPLPGRGPSKRGVGLSFGPDVTKSFLQENNLELIVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPDLKPNIVTYSAVPHPDVKPMAYANNFLRMFS | 638 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco10g0215 | 638 | Pfam | Tetratricopeptide repeat | 167 | 199 | IPR001440 | GO:0005515 | |
| Acco10g0215 | 638 | PRINTS | Serine/threonine phosphatase family signature | 503 | 530 | IPR006186 | GO:0016787 | |
| Acco10g0215 | 638 | PRINTS | Serine/threonine phosphatase family signature | 559 | 579 | IPR006186 | GO:0016787 | |
| Acco10g0215 | 638 | PRINTS | Serine/threonine phosphatase family signature | 581 | 597 | IPR006186 | GO:0016787 | |
| Acco10g0215 | 638 | PRINTS | Serine/threonine phosphatase family signature | 439 | 463 | IPR006186 | GO:0016787 | |
| Acco10g0215 | 638 | PRINTS | Serine/threonine phosphatase family signature | 473 | 499 | IPR006186 | GO:0016787 | |
| Acco10g0215 | 638 | PRINTS | Serine/threonine phosphatase family signature | 376 | 403 | IPR006186 | GO:0016787 | |
| Acco10g0215 | 638 | PRINTS | Serine/threonine phosphatase family signature | 406 | 433 | IPR006186 | GO:0016787 | |
| Acco10g0215 | 638 | Pfam | Calcineurin-like phosphoesterase | 377 | 570 | IPR004843 | GO:0016787 | |
| Acco10g0215 | 638 | Pfam | Tetratricopeptide repeat | 104 | 165 | - | - | |
| Acco10g0215 | 638 | SMART | tpr_5 | 98 | 131 | IPR019734 | GO:0005515 | |
| Acco10g0215 | 638 | SMART | tpr_5 | 166 | 199 | IPR019734 | GO:0005515 | |
| Acco10g0215 | 638 | SMART | tpr_5 | 132 | 165 | IPR019734 | GO:0005515 | |
| Acco10g0215 | 638 | ProSiteProfiles | TPR repeat profile. | 132 | 165 | IPR019734 | GO:0005515 | |
| Acco10g0215 | 638 | PIRSF | PPPtase_5 | 85 | 638 | - | - | |
| Acco10g0215 | 638 | Pfam | PPP5 TPR repeat region | 302 | 368 | IPR013235 | - | |
| Acco10g0215 | 638 | SUPERFAMILY | Metallo-dependent phosphatases | 325 | 632 | IPR029052 | - | |
| Acco10g0215 | 638 | ProSiteProfiles | TPR repeat profile. | 166 | 199 | IPR019734 | GO:0005515 | |
| Acco10g0215 | 638 | ProSiteProfiles | TPR repeat profile. | 98 | 131 | IPR019734 | GO:0005515 | |
| Acco10g0215 | 638 | PANTHER | SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED | 130 | 631 | - | - | |
| Acco10g0215 | 638 | FunFam | Serine/threonine-protein phosphatase 5 | 88 | 225 | - | - | |
| Acco10g0215 | 638 | FunFam | Serine/threonine-protein phosphatase 5 | 296 | 637 | - | - | |
| Acco10g0215 | 638 | SUPERFAMILY | TPR-like | 96 | 223 | IPR011990 | GO:0005515 | |
| Acco10g0215 | 638 | Gene3D | Tetratricopeptide repeat domain | 88 | 243 | IPR011990 | GO:0005515 | |
| Acco10g0215 | 638 | SMART | pp2a_7 | 344 | 620 | IPR006186 | GO:0016787 | |
| Acco10g0215 | 638 | CDD | MPP_PP5_C | 316 | 631 | IPR041753 | - | |
| Acco10g0215 | 638 | Gene3D | - | 295 | 637 | IPR029052 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco10g0215 | Acco-ChrAcco10 | 5286013 | 5295628 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Acco10g0215 | 375 | 565 | Calmodulin-binding Proteins | AT5G63870 | 36.000 | 1.00e-39 | 145 |