Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0214 ATGGCTTCAGAGAAGAAGCTGTTGAACCCTATGAGGGAAATCAAAGTCCAGAAGCTCGTTCTCAATATCTCAGTGGGCGAGAGTGGAGATCGTCTCACCAGAGCTGCTAAGGTGTTGGAGCAGCTTAGTGGCCAGACCCCAGTTTTCTCTAAAGCAAGATATACTGTTCGTTCCTTTGGGATCAGAAGGAATGAAAAGATTGCATGCTATGTCACAGTTAGAGGTGAAAAGGCAATGCAGCTTTTAGAGAGTGGTCTCAAGGTGAAGGAATATGAACTACTGAGAAGAAACTTCAGTGATACTGGATGCTTTGGCTTTGGCATCCAGGAGCATATTGATTTAGGAATTAAGTATGATCCGTCTACTGGCATTTATGGAATGGACTTCTATGTTGTTTTGGAACGCCCTGGTTACCGTGTGGGACGTCGCCGCCGGTGCAAGTCACATGTTGGGATCCAGCACCGCCTATCGAAGGAAGATGCCATGAAGTGGTTCCAAGTGAAATACGAAGGAGTGATCCTGAACAAGGCCCAGGCAATCTTTAGTTAG 549 0.4627 MASEKKLLNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVGRRRRCKSHVGIQHRLSKEDAMKWFQVKYEGVILNKAQAIFS 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0214 182 Pfam ribosomal L5P family C-terminus 66 164 IPR031309 -
Acco10g0214 182 SUPERFAMILY RL5-like 9 173 IPR022803 -
Acco10g0214 182 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 2 176 IPR002132 GO:0003735|GO:0005840|GO:0006412
Acco10g0214 182 Gene3D - 2 177 IPR022803 -
Acco10g0214 182 FunFam 60S ribosomal protein L11 2 174 - -
Acco10g0214 182 PIRSF RPL5p_RPL5a_RPL11e_RPL5o 1 172 IPR002132 GO:0003735|GO:0005840|GO:0006412
Acco10g0214 182 Pfam Ribosomal protein L5 9 62 IPR031310 -
Acco10g0214 182 ProSitePatterns Ribosomal protein L5 signature. 39 55 IPR020929 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0214 Acco-ChrAcco10 5274543 5276125 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0214 1 180 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 93.889 3.49e-127 353