Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0193 ATGTCTTCTTCTTCTTCTTTCTCACCACGACCTTCATCTTCCCCAGATGACACCACCGCCGCCAACAATGGCGGTGGCTCTGATCCTGCGGGCCCTAGCACCAGCCGGCGAAGAAGACGACGTCGTCCTATGAACGATGTTTTGCCTGAGCCTTTTCTTGAAGCTTTAGCCATTCAAATCGCCACTGAAGCTTCTCACTCTCATGGACGTCTTGCTACTGCTCCTTCTATTGCCAATCTCTTTCAGGTTTGTTCTACATGGCGAGCCATTTCGCGCTCGGATCACCTGTGGCAGCGGCTCGTCAGGTGCATCTGGCGTCGAGCCCACAGAATACGCGACACATGGCATCAGGAGTTCATCTTCTTGCATCGAACGGCTAGAAATTTTGTCGCGGGCAGATACTTCTACTCCTTCTTACACTATAACCCCGCCCCGTTTGACTTAGACCCACCCAATCTTTGCCGTTGTCTCACCCTCTCCGACAACCACCTCGCTTGTGGCTTCGCCGACGGCACCGTCCGTCTCTTCGACCTCCAAACACGCGCCCACGTCATCACCTTCCGGTCCCACCACGATGACGTGTTGGGTATTTTCTCGAGATCCGTGTCGGGGATTATCATCACAGATTCTACGCTGGTCTTTGCCACACTGGACGGAAACATCTACATCGCAGACATCAACGGGCCACCCGATACCCGCATAACCCGACCCGGTGTCGTTCTGAACAACGGCGTCTTGGTGGAGTTCGCTGGAAGCGAAAGGTGGTGGGTGGGCCTCTTCGCCGGCGTCCCGCATCAATCATTCCGTGTCTGGGACGCGCGCGGCGAGCAACCGGATTACATTGGCGGATCCTTAACCAACGCGGATTCCGTCCAGGGCTGGCACATGCTGACGGATATAACCGACCCGGTTGGCCGGTTGCGGGTCACCACTCGCGAGCTTGCCGTGGCATGCACGCGCTCGAGGCTCGTAGTCTTCGATCTGAGGAACCCAGGGGTTTATTTGCGTGAGCTCGCGTCCAGAATCGGTTTCATTGTGACCTCGCTGGACGTGAGCCATGAGACTTTGGTTATAGTGGAGAGGAGGGGCCGTGCTAGGGTGCGCAGGGCAAGCACGTTAGAGCCTCAATGTGAAGAATTTACGGTGGCGGGACCGTCCCTGAGGGGGATGATCGGGTGCATGAACTCGGTCTATGTGCTAATATGCGCCGGTGGTTATGTGAGATTGTGGAACGTAGAACTTGGAGAGGCGCATCTGCGTTTGACCATGAACGAAAGGATAGGGTTGGGTATGGCAATGGCTGCGAACGACAGACACGTGGCTGTATCATGTAGAGACGCGTCAATCCACCTCTGGGATTTTGGTATATTGTAG 1374 0.5553 MSSSSSFSPRPSSSPDDTTAANNGGGSDPAGPSTSRRRRRRRPMNDVLPEPFLEALAIQIATEASHSHGRLATAPSIANLFQVCSTWRAISRSDHLWQRLVRCIWRRAHRIRDTWHQEFIFLHRTARNFVAGRYFYSFLHYNPAPFDLDPPNLCRCLTLSDNHLACGFADGTVRLFDLQTRAHVITFRSHHDDVLGIFSRSVSGIIITDSTLVFATLDGNIYIADINGPPDTRITRPGVVLNNGVLVEFAGSERWWVGLFAGVPHQSFRVWDARGEQPDYIGGSLTNADSVQGWHMLTDITDPVGRLRVTTRELAVACTRSRLVVFDLRNPGVYLRELASRIGFIVTSLDVSHETLVIVERRGRARVRRASTLEPQCEEFTVAGPSLRGMIGCMNSVYVLICAGGYVRLWNVELGEAHLRLTMNERIGLGMAMAANDRHVAVSCRDASIHLWDFGIL 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0193 457 Gene3D - 247 455 IPR015943 GO:0005515
Acco10g0193 457 PANTHER WD40 REPEAT PROTEIN 12, 37 27 377 - -
Acco10g0193 457 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 151 454 IPR011047 -
Acco10g0193 457 MobiDBLite consensus disorder prediction 1 44 - -
Acco10g0193 457 MobiDBLite consensus disorder prediction 1 30 - -
Acco10g0193 457 SUPERFAMILY F-box domain 73 126 IPR036047 GO:0005515
Acco10g0193 457 Gene3D - 137 242 IPR015943 GO:0005515
Acco10g0193 457 Gene3D - 41 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0193 Acco-ChrAcco10 4494613 4505448 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Acco10g0193 None None None