Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0177 ATGGTCACCCTGAGTTTCACTGTTGAGGTAAGTGAATCCAGGGCCAAAACTGCAGCAGCCGCCATGGTTCTGAAGACGGAGCTCTGTCGTTTTAGTGGGGGCAAGATCTACCCTGGGAAGGGCATCAGATTTGTTCGTGGTGATTCTCAGGTGTTTTTGTTTGCCAACTCAAAATGCAAGAGGTACTTTCACAACAGATTGAAGCCGTCAAAGCTCACCTGGACTGCCATGTACAGGAAGCAACACAAGAAGGACATTGCCCGAGAGGTTGTGAAGAAGAGGCGTCGCACCACCAAAAAGCCTCACTCTAGGTCTATTGTTGGTGCTACTTTGGAAGTTATCCAGAAGAAAAGAACTGAGAAACCAGAGGTCCGAGACGCTGCTAGAGAAGCTGCTCTTCGTGAGATTAAGGAGAGGATCAAGAAAACAAAGGATGAGAAGAAGGCAAAGAAGGCAGAAGTGATGGCCAAGACACAAAAAGCGCAAGGAAAAGGAAATGTTCCCAAGGGCGCTGCCCCTAAAGGTCCTAAGCTTGGTGGAGGCGGTGGGAAGCGCTGA 558 0.4928 MVTLSFTVEVSESRAKTAAAAMVLKTELCRFSGGKIYPGKGIRFVRGDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAREVVKKRRRTTKKPHSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVMAKTQKAQGKGNVPKGAAPKGPKLGGGGGKR 185
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0177 185 SMART 4TRASH 29 67 IPR011017 -
Acco10g0177 185 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 27 79 - -
Acco10g0177 185 ProSitePatterns Ribosomal protein L24e signature. 31 48 IPR023442 -
Acco10g0177 185 MobiDBLite consensus disorder prediction 139 157 - -
Acco10g0177 185 CDD Ribosomal_L24e_L24 24 77 IPR000988 -
Acco10g0177 185 PANTHER 60S RIBOSOMAL PROTEIN L24 25 176 IPR000988 -
Acco10g0177 185 MobiDBLite consensus disorder prediction 139 185 - -
Acco10g0177 185 Gene3D - 90 162 - -
Acco10g0177 185 Pfam Ribosomal protein L24e 25 87 IPR000988 -
Acco10g0177 185 Gene3D Ribosomal protein L24e 24 85 IPR038630 -
Acco10g0177 185 Coils Coil 133 160 - -
Acco10g0177 185 FunFam 60S ribosomal protein L24 24 85 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Acco10g0177 Acco-ChrAcco10 4040156 4041999 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0177 22 178 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 83.439 8.02e-87 250