Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0153 ATGGGTTATCTATGTGATTTCTGTGGAGAACAGAGGTCCATGGTGTATTGCCGTTCTGATGCTGCATGCTTGTGTTTGTCGTGCGATCGAAATGTTCATTCTGCTAATGCCCTTTCAAGACGTCATTCGAGGAATCTAGTATGTGAGAGATGCAATTCACAACCTGCTATTGTAAGGTGTACCGAAGAGAGGATTTCACTATGTCAGAATTGTGATTGGGTGGGCCACAGTACTTCCACATCTTTGTCAACACATAAGAGGCAAGCAATCAATTGCTATTCTGGATGCCCTTCAGCAACAGAACTTTCTTCAATATGGTCATTCATCTTGGACATTCCAACTATTGGTGAGTCTTCATGTGAGCAAGAACTAGGAATGATGAGTATTAATGAGAACAGCAACAGGAGTGATTGGGTTCCCCCTGAAAGTCAGAATGCGTCTGGTTCAGCTCAAGTAATTGATGTACACAGCATGGATAAGTCTTTTGTTGGGCCATCTTCAATGCCTGAGTCGAGCTCAGAGCCTCGTACTCTAGACCACCCAACTGGACCTGCCAATCAAAATCTATCCAAGCTATACTGCCCTGGTACAAAAGGTTCTGAGCTATATGAAGATGATGACCTGTATGGTGACTTTGACATGGATGAAATGGATCTGAATCTTGAGAACTACGAAGAACTTTTTGGTATGGCTCTTAGTCATTCTGAAGAGCTTTTTGAAAATGGCGGGATTGATAGTTTGTTTGGGACAAAGGAAACATCTGCCGGTGATTCCAATCATCAGGCTGCTGATGAGGGATCGTCAGTTGGACTGGTCAAGACACCACATCCAGCATGCAGCAATGCAGCATCTGCAGATTCCATGCTAAGTACGAAAACCGAACCGATTCTCTGTTTCACTGGAAAGCAAGCGCAATCAAATCTTTCATTTTCTGGTGTTGCCGGAGAGAATAGTGGTGCTGAATATCAAGATTGTGGTGCTTCTTCGATGCTTCTCACGGGGGAGCCTCCATGGTGTCCTCCATGCCCTGAGAGTTCCCTGAAGACTTCCAACCGCAGTGATGCCGTCATGCGTTACAAAGAAAAGAAGAAGACACGCATGTTTGAAAAAAGAGTGAGGTATGCCTCTCGCAAGGCAAGGGCTGATGTTCGAAAGCGTGTGAAGGGCCGGTTTATTAAAGCCGGTGAAGCCTATGATTACGATCCTTTGAGTCAAACCAGAAGCTACTGA 1230 0.4496 MGYLCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRNLVCERCNSQPAIVRCTEERISLCQNCDWVGHSTSTSLSTHKRQAINCYSGCPSATELSSIWSFILDIPTIGESSCEQELGMMSINENSNRSDWVPPESQNASGSAQVIDVHSMDKSFVGPSSMPESSSEPRTLDHPTGPANQNLSKLYCPGTKGSELYEDDDLYGDFDMDEMDLNLENYEELFGMALSHSEELFENGGIDSLFGTKETSAGDSNHQAADEGSSVGLVKTPHPACSNAASADSMLSTKTEPILCFTGKQAQSNLSFSGVAGENSGAEYQDCGASSMLLTGEPPWCPPCPESSLKTSNRSDAVMRYKEKKKTRMFEKRVRYASRKARADVRKRVKGRFIKAGEAYDYDPLSQTRSY 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0153 409 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Acco10g0153 409 Pfam B-box zinc finger 44 89 IPR000315 GO:0008270
Acco10g0153 409 SMART bboxneu5 4 47 IPR000315 GO:0008270
Acco10g0153 409 SMART bboxneu5 48 90 IPR000315 GO:0008270
Acco10g0153 409 CDD Bbox1_BBX-like 4 44 - -
Acco10g0153 409 CDD Bbox1_BBX-like 47 90 - -
Acco10g0153 409 MobiDBLite consensus disorder prediction 131 150 - -
Acco10g0153 409 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 397 - -
Acco10g0153 409 MobiDBLite consensus disorder prediction 164 191 - -
Acco10g0153 409 ProSiteProfiles Zinc finger B-box type profile. 43 90 IPR000315 GO:0008270
Acco10g0153 409 MobiDBLite consensus disorder prediction 161 191 - -
Acco10g0153 409 Pfam CCT motif 352 394 IPR010402 GO:0005515
Acco10g0153 409 ProSiteProfiles CCT domain profile. 352 394 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0153 Acco-ChrAcco10 3422312 3425991 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0153 1 409 C2C2-CO-like Transcription Factor Family AT3G07650 56.872 3.07e-155 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Acco10g0153 zf-B_box 1.2e-05 No_clan