Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0098 ATGCCTCGCTGCAACAACTTCAAAGGAAAAGATTTGCCTTACGTCCACCTTCGGATATGGTGGCAGGATCTCGCTCTTTTTTTGCAAATCAAAATAAACGAGGGAAATGATGGCGTAGTTGGACAAAATTCCTTTATTTACCCATCAATAAATACCCTGGATCGCTCTGCAGCATCCCCACTAGCTGCTTTTCACTTCGAGAACGTGAAATCATCGTGGCCGCCCTTGAGGGCCGAAGAGAACGACGAAACAGTGATGCAGGGAGCCGCAGCCGAAGGAGAGGCGGTGGACTTCGAGCCGGAGGATGATGACTTGATGGACGAAGATGGCGGTGCTGAAGCCGACGCTTCTGCATCTCCCCATGCTCCTCCTCTCCCGAAGCTCAAATCCGCCATTACTGGTGGCGCTTCTTCCTCCCTCTCTGGCCCTAAAAAAACCAAAGGGAGAGGCTTTCTTCAGGAAACCGATGCCAATCGTAACACCGGTCTTTCTGGGTCCGATTTCGAGTCCCTCGCCACTGAGGGTGGGCCCGGTCCTCAACGATCAATTGAAGGATGGATTATTCTGGTAACGGGAGTGCATGAGGAAGCACAGGAGGATGATCTACAAAATGCATTTGGTGAATATGGAGAGATTAAAAATCTACATTTAAATCTTGACCGTCGCACTGGTTTTGTCAAAGGTTATGCATTGATTGAATATGAGCATGCTGAAGAAGCCCGAAATGCCATAGAGAATTTGAATGGATCTGAACTTCTTACTCAAACCCTTTTTGTGGACTGGGCTTTTAGCAGTGGACCTATTAATGGGCCGATGAGAAGAAAGAATGCTAGACCAACAAGGGAACGACGCTCGAGGAGTCCTCGGAGGAGATATTGA 879 0.4858 MPRCNNFKGKDLPYVHLRIWWQDLALFLQIKINEGNDGVVGQNSFIYPSINTLDRSAASPLAAFHFENVKSSWPPLRAEENDETVMQGAAAEGEAVDFEPEDDDLMDEDGGAEADASASPHAPPLPKLKSAITGGASSSLSGPKKTKGRGFLQETDANRNTGLSGSDFESLATEGGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEYGEIKNLHLNLDRRTGFVKGYALIEYEHAEEARNAIENLNGSELLTQTLFVDWAFSSGPINGPMRRKNARPTRERRSRSPRRRY 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0098 292 SUPERFAMILY RNA-binding domain, RBD 179 290 IPR035979 GO:0003676
Acco10g0098 292 MobiDBLite consensus disorder prediction 269 292 - -
Acco10g0098 292 Gene3D - 134 287 IPR012677 -
Acco10g0098 292 CDD RRM_RBM8 180 267 IPR033744 GO:0003729
Acco10g0098 292 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 188 255 IPR000504 GO:0003723
Acco10g0098 292 PANTHER RNA-BINDING PROTEIN 8A 92 291 IPR008111 GO:0003723|GO:0005634|GO:0005737|GO:0006396
Acco10g0098 292 MobiDBLite consensus disorder prediction 95 111 - -
Acco10g0098 292 PRINTS RNA binding motif protein 8 family signature 233 249 IPR008111 GO:0003723|GO:0005634|GO:0005737|GO:0006396
Acco10g0098 292 PRINTS RNA binding motif protein 8 family signature 140 152 IPR008111 GO:0003723|GO:0005634|GO:0005737|GO:0006396
Acco10g0098 292 PRINTS RNA binding motif protein 8 family signature 251 263 IPR008111 GO:0003723|GO:0005634|GO:0005737|GO:0006396
Acco10g0098 292 PRINTS RNA binding motif protein 8 family signature 177 191 IPR008111 GO:0003723|GO:0005634|GO:0005737|GO:0006396
Acco10g0098 292 SMART rrm1_1 187 260 IPR000504 GO:0003723
Acco10g0098 292 MobiDBLite consensus disorder prediction 277 292 - -
Acco10g0098 292 FunFam RNA-binding protein 8A-like 117 283 - -
Acco10g0098 292 MobiDBLite consensus disorder prediction 153 168 - -
Acco10g0098 292 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 186 264 IPR000504 GO:0003723
Acco10g0098 292 MobiDBLite consensus disorder prediction 93 179 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0098 188 262 Eukaryotic Initiation Factors Gene Family AT3G11400 30.667 2.26e-08 52.8