Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0094 ATGACATTCCTCTTCAGAAAACCTCAATTTTCTGAGAAGCTTGCACTTTGGTGGGTACTGTTAGTTGTCTATTTAATCTTGTCCCCATCTCATGTTTCCTCTTCCATTATTTCACCAAATAGTGAAGCCAACACTTTGCTAAAGTGGAAGGCCAGCCTTGACAACCAAAGCCAAACTCTGTTGTCAACATGGAGAGATAATATCAGTCATTCCTGCAATTGGGTTGGAATTGAATGCAATGTGTTCAACTCCATTTTCAACATATCTCTTGGAGATCTTGGGTTAAGAGGTACGCTTGATAGTCTCAATTTCTCATCTTTTCCCAATCTCCAATTCATATATATGCGAAATAACTCATTTCATGGGATTATCCCTACCCATATTGGTGAACTCTCCAAACTTAGTTTTATAGATTTCTCTTTTAATGAGTTATCTGGTGGCATTCCAACAAGTATTGGCAACTTGTCCACACTCTCATTTGTTTCTTTCCAACACAATTATCTTTCTGGAGCAATTCCAGATGGGATCACACAATTGACCGGGCTTAAATCTCTATTCTTAAATTCTAACAATTGGACCTCATTTGCTGGTACCTTTGGCTATGTTGCTCCAGAACTTGCGTATACAATGGAAGTGACTGAGAAATGCGACGTTTATAGTTTTGGAGTGATGGCTTTGGAAATAATTATGGGAAAACATCCGACAGATCTCATAATGTCTTCTATTGATGTACCAACAATAGTTGCTCATGATTTGGATTTGAAGGAGGAAATAGACCAAAGGCTACCTTATCCTCGAGGTTCTATGGCTGAGAAGGTGATGTTGATTGCAAGAGTAGCTTTTACTTGTTTGAATAAAAATCCACGTACTCGCCCATCCATGGAGCAAGTATGCAATGAGCTCTTGGTGCCAAGATCACATGTTTTTGGTCCCATTCCATAG 942 0.3907 MTFLFRKPQFSEKLALWWVLLVVYLILSPSHVSSSIISPNSEANTLLKWKASLDNQSQTLLSTWRDNISHSCNWVGIECNVFNSIFNISLGDLGLRGTLDSLNFSSFPNLQFIYMRNNSFHGIIPTHIGELSKLSFIDFSFNELSGGIPTSIGNLSTLSFVSFQHNYLSGAIPDGITQLTGLKSLFLNSNNWTSFAGTFGYVAPELAYTMEVTEKCDVYSFGVMALEIIMGKHPTDLIMSSIDVPTIVAHDLDLKEEIDQRLPYPRGSMAEKVMLIARVAFTCLNKNPRTRPSMEQVCNELLVPRSHVFGPIP 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0094 313 PANTHER LEUCINE RICH REPEAT KINASE 2 48 190 - -
Acco10g0094 313 FunFam Nuclear pore complex protein NUP107 39 197 - -
Acco10g0094 313 Pfam Leucine rich repeat N-terminal domain 39 80 IPR013210 -
Acco10g0094 313 SUPERFAMILY L domain-like 42 195 - -
Acco10g0094 313 Gene3D Transferase(Phosphotransferase) domain 1 175 307 - -
Acco10g0094 313 Gene3D Ribonuclease Inhibitor 41 155 IPR032675 -
Acco10g0094 313 ProSiteProfiles Protein kinase domain profile. 1 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g0094 313 Pfam Protein kinase domain 185 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g0094 313 SUPERFAMILY Protein kinase-like (PK-like) 181 303 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0094 Acco-ChrAcco10 2221136 2224495 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0094 104 213 Receptor kinase-like Gene Family AT4G08850 26.866 1.69e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco10g0094 Pkinase 1.3e-11 CL0016