Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g0017 ATGTCCTCGCAGCCAAACGATTTTGCCGGAGCTGATCGCAATACTGCACTGCATGCTTCCTTGCTCGTCACTAGCAACAAATACGGTCGGCTATGGCGCCGAACGTTATACGTTCGAATCTTCATCTCTCTCACGCGAACAGCAAGAACTCCTACTGCCACGCGCGAATCTGAGCAATTATCTCATTACACCCCATTACCCACGAGAACTTCCTCTACTAAATCTTCTTGTGCGATTGATGTTGCCTCTGATAACGAAGAGGAGGATACTTTGCGTTCAGAACAGCGCATCAAGAACGATATTGCTCGTATTGTTAAGGACAAGGACTTGGAATCGCTTCGCGAGCTCGGGGGAGTCGACCGTGTTCGCTCTGTTCTTTGTCATCTTGCATCAGAGGAAGGCAATATTGATAATGGGAACCATCAAGTGTTGGAGACCACTAACCAAGTTCAGGGGCGGAGCCTCTCCTACTGTTTTGTGAATAGTTGCAAACGCAATAGTTATACAATCTCTTTACTCATGACCTCAGCTCTGTTGTCCTTGGCCACAGAGATGAAGCAGGAAGGACCTAAATATGGTTGGCATGATAGTGCTGCCATACTTGTTGCCATAATTGTGATTATCTCTTTCTCCTCTATGGCAAACTTTTGGCGTGAAAAAAAGATGCTAAAATTATCAGAGAAGAAAAGTGATTTGAAGTTTAATGTTGTTAGATGTGAAACCCCCCAAATGGTTGCCATATCTGATATTGTGGTTGGTGATATAGTGCGTCTTAAGATGGGTGACGAGTTTCCAGCTGATGGTTTGCTTCTAAATAATAGAAATGAGACACAGGATATATTTCTCTTGTTTGGTTCAAAAGTATTGTTTGAGGGTCAAACTTCGATGCTTGTGACATCAGTTAGAAACAAAAAATCAGTAGACATGCAGAATTCAGCGGCAAATAATCCTGAAAAGAAGAAGTCGTTGGAAAGTCGAATTGAGAGGTTGATTTCCTTCTTCGACAACATTACCCTTCTTATGGCTGTGTTGGTTATGCTTGTGGTGCTCATTCGTCTAATTTGCAAGAAAAATGGGGACAACAGTGGGTTGCCAGAAATTAAGGGCAAGGTTTCAGTTGACTTCCTGTTGAAATTGATGGAGAGAATTTTCTTGAAACCCGAAGGAAAAGTTTCCATTTTAACCAGCCTTGTAACTGTTGCAATAATAAGCATGCAACATGGGGTACCACTTATGATTACAATTTCTCTCAAATACCAAATGGACAAGGCGGTAAAGAACCAAGTTGCTGATCTTCATGATTTATCGTCTTGTGCAACAATGGGACTGGTTACAGTCATATGTGTTGATGCATCTGGAGGGCTAATGTCTAAACTGATGGAGGTTAGTAGAATTCAGATTGGGGAGAGAGATATCAGCAATATTGATGATGTGACATCAGAAATTAATCAAGCTGTGCTTGACAAACTTCAGCAAGGAATCAGCGTGTCTGTTCTTGCCCCGGAACTTATTCTTTCTCCAGTGTCCAATTCACTTATTTCTTGGGCAGAAACCACTTGGGGCGTGAACAGAGAATCTTTAGGTGAGAACTTTACCATTCTTCAGCATAGCAGACAAAACTCGAGGGGAAATGGAAATGGAGTTTTAGTGAGAAAAGTTGGAGACCATGAAAAAGATCTGCACTCGCACTGGAGTGGGGCAGCATCTACAATACTGGAAATGTGTTCACACTATTATGATAGTGATGGGGATTACCATGGCATAACAAATCAGAAAATGAAATTTGGGGAGGTCATTAAAGAAATGGAGGATAGCGGCCTGGAGCCTATTGCACTTGCTTATCAAAACACCCAGGCTCAGGAACTTCAGCAGGATGGACTAATCTTGCTAGCTCTGATAGGTCTCAAACACTTTCACCTTGAAGAGACAAAGAAAGCCTTGGAACACCTCAGAAACGATGGAATCAAGATCAAATTGGTGGCAGGGCAAGACATCGCAGCAGTGAGAGCCCTAGCTTGTGAAATAGGAATACAAGTTCCCCATGAAGATGGTGTTATTCTTGAAGGAAAAGAAATTCAAGATTTGAACAGCACAGCCAGGTCAAAGAAGTTCGATGAAGCACTGGTAATGGGAGGTTTCCTTCCTGATGACAAGGTTCTCATGATTAGGTGTTTGCAAGATGAAGGTCATGTGGTTGCATTCTTTGGGGCCTTGACAGTAAGTGATGCTGCAGTCCGAGAGGCGGCTGATATAGTGATAGATGCAAAGTCTCAGAACCCAAGATATGATATGGAGAGTTCGAATATATCTGTTGAAGGTTTCAGTGCAATAACTACAATTGTGAGGGCTGGTAGATGTCAATATCGTAATATTCAAAAGTTCATTCAACTTCAGCTCACTGCTAGCTCATCTGGGTTATTCATAACCTTGATTACAACAATATGCACCGGGCAGTCTCCCCTGACGGCCATTGAATTGATTTGGGTGAACACAATAATGTGCCTTTTGGGAGGCCTAATTATGTCAATGAATTTAGACATCGAGGAGGATCAGCATGCCAACCAACCAAATGATCCGAAGCAGTCACTTATATCCCAAGAAATCTGGAAAGACATAGCTATCGATGTCTTGTATCAGGCTTCTGTTTCCTTGATATTTCTTTTTGGAGGAGAAGTTACAGACAGAACAAACCAAGTTAGGAAGACTATGATCTTCAACATATTCATGCTATGCCAGTTCTTCAATCAGCTATACATCTTCGGCCTAGTGAAAAGGGGAATTTTCAAGATGGTTCTCCTGAGATTCTTCTTCTTGGTTGCATTGGGGGTTTGCCTGATCATGCAGGTTCTGGTGATTCAATATGCAAATAGCCTAGCAGATTGCACGAGGCTGAATGGAACTCAATGGGTTATCTGTATCGTGGTTGGTGCGCTTTCATGGTTAATTGAGTGGCCATTGAAGAAGTTTCTTACTTGGATATTTAATCATTTTCATCCCTGTACCATTTAA 3009 0.4217 MSSQPNDFAGADRNTALHASLLVTSNKYGRLWRRTLYVRIFISLTRTARTPTATRESEQLSHYTPLPTRTSSTKSSCAIDVASDNEEEDTLRSEQRIKNDIARIVKDKDLESLRELGGVDRVRSVLCHLASEEGNIDNGNHQVLETTNQVQGRSLSYCFVNSCKRNSYTISLLMTSALLSLATEMKQEGPKYGWHDSAAILVAIIVIISFSSMANFWREKKMLKLSEKKSDLKFNVVRCETPQMVAISDIVVGDIVRLKMGDEFPADGLLLNNRNETQDIFLLFGSKVLFEGQTSMLVTSVRNKKSVDMQNSAANNPEKKKSLESRIERLISFFDNITLLMAVLVMLVVLIRLICKKNGDNSGLPEIKGKVSVDFLLKLMERIFLKPEGKVSILTSLVTVAIISMQHGVPLMITISLKYQMDKAVKNQVADLHDLSSCATMGLVTVICVDASGGLMSKLMEVSRIQIGERDISNIDDVTSEINQAVLDKLQQGISVSVLAPELILSPVSNSLISWAETTWGVNRESLGENFTILQHSRQNSRGNGNGVLVRKVGDHEKDLHSHWSGAASTILEMCSHYYDSDGDYHGITNQKMKFGEVIKEMEDSGLEPIALAYQNTQAQELQQDGLILLALIGLKHFHLEETKKALEHLRNDGIKIKLVAGQDIAAVRALACEIGIQVPHEDGVILEGKEIQDLNSTARSKKFDEALVMGGFLPDDKVLMIRCLQDEGHVVAFFGALTVSDAAVREAADIVIDAKSQNPRYDMESSNISVEGFSAITTIVRAGRCQYRNIQKFIQLQLTASSSGLFITLITTICTGQSPLTAIELIWVNTIMCLLGGLIMSMNLDIEEDQHANQPNDPKQSLISQEIWKDIAIDVLYQASVSLIFLFGGEVTDRTNQVRKTMIFNIFMLCQFFNQLYIFGLVKRGIFKMVLLRFFFLVALGVCLIMQVLVIQYANSLADCTRLNGTQWVICIVVGALSWLIEWPLKKFLTWIFNHFHPCTI 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g0017 1002 MobiDBLite consensus disorder prediction 51 93 - -
Acco10g0017 1002 SUPERFAMILY Calcium ATPase, transduction domain A 233 276 IPR008250 -
Acco10g0017 1002 SUPERFAMILY Calcium ATPase, transmembrane domain M 167 995 IPR023298 -
Acco10g0017 1002 Gene3D - 632 770 IPR023214 -
Acco10g0017 1002 Pfam E1-E2 ATPase 233 422 - -
Acco10g0017 1002 MobiDBLite consensus disorder prediction 51 80 - -
Acco10g0017 1002 PANTHER CATION TRANSPORTING ATPASE 97 987 - -
Acco10g0017 1002 SUPERFAMILY HAD-like 628 757 IPR036412 -
Acco10g0017 1002 Pfam Cation transporting ATPase, C-terminus 819 988 IPR006068 -
Acco10g0017 1002 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 503 635 IPR023299 GO:0000166
Acco10g0017 1002 Gene3D - 219 272 - -
Acco10g0017 1002 Gene3D - 505 631 IPR023299 GO:0000166
Acco10g0017 1002 Gene3D - 771 992 - -
Acco10g0017 1002 Gene3D - 168 218 - -
Acco10g0017 1002 Gene3D - 288 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g0017 Acco-ChrAcco10 230932 235293 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g0017 27 990 Primary Pumps ATPases AT3G63380 31.631 1.71e-130 419