Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco1000751g0001 ATGGGATCAACAGAGGTACCGATCAAGGGAAATCGCGTCGATGGGACGGAGGGCAGCCACTCCTCTGTTTACAACAACCATAACGATGCTTGGAAACCTGCAGAGTGTCAGAATGCTCACTCATCGTCAACTGTGAGAGACCCGGAAGAAGCGCTCTACCGGGAGCTTTGGCATGCTTGTGCTGGTCCCCTCGTTGCAGTGCCCCGTAAAGGGGAGCGGGTCTTCTATTTTCCTCAGGGACACATTGAGCAAGTGGAGGCGTCCACAAATCAAGTGGCGGACCAGCATATGCCTGTGTACGATCTCCCATCGAAAATCCTTTGTCGAGTGATCAACGTGTTGTTGAAGGCTGAGCCGGACACCGACGAGGTGTTTGCCCAGGTGACCTTGCTTCCGGAGTCAAATCAAGATGAAAACGCCGTTGAGAAAGAGGCTCTGCCTTCTCCACCGCCACGATTTCAGGTGCATTCGTTCTGTAAAACTCTGACGGCCTCTGATACAAGCACTCATGGTGGATTTTCAGTACTGAGACGTCATGCCGATGAATGCCTTCCTCCTCTGGATATGTCGAAGCAGCCACCTAACCAGGAGTTGGTGGCGAAGGATCTACTCGGTAACGAGTGGAGATTCAGGCATATCTTTAGAGGTCAACCACGCAGACATTTACTACAAAGCGGTTGGAGTGTTTTTGTCGGCTCTAAGAGGCTTGTTGCTGGTGATGCATTTATATTTTTGAGGGGTGAGAATGGGGAACTTCGTGTTGGAGTGAGACGTGCAATGAGACATCAGGGTAATGTTCCGTCCTCAGTGATCTCTTGTCACAGCATGCATCTTGGTGTCCTTGCAACTGCGTGGCATGCGGTTTCGACTGGAACCATGTTCACTGTGTATTACAAGCCCAGAACTAGTCCTGCCGAATTCATTGTTCCTTACGAACAATATATGGAGTCTCTTAAAAATAATTATACAATAGGAATGCGGTTCAAAATGAGGTTTGAAGGTGAAGAGGCTCCAGAGCAGAGGTTTACTGGTACTGTTATTGGACTTGAAGATGCTGATCCACAAAGGTGGCCAAAATCCAAATGGAGATGTCTCAAGGTGAGATGGGATGAAACATCTAGCATTCCTCGTCCTGAGAGAGTTTCCCCTTGGAAAATCGAACCTTCTCACGCTCCTCCAGTTCTAAATCCTCTTACACTGGCCAGGCCTAAAAGGCCTCGGCCTAATGCGATTCCATCATCACCTGATTCGTCTGTTCTCACTCGTGAAGTGTCATCTAAGGTAACTATTGACCCTTTGTCGGCAAGTGGATTTCCAAGGGTATTGCGAGGTCCAGAATTCTCAACCTTGAGAGGCAATTTGGCAGAAAGCTATGAATCTGATACTGCCGAAAAGCTTGATGAAAAAAATGCAGTGTCTACTTCAAGTACGTTTGCTCCGGAGAGCTGGACACCAACAGGGAGGCATGAGCCTTCATGTTCAGACTTGCTTTCAGGCTTTGGGATAAATGGAGATCGAAACCATCTATCCTTGGTAGATCAAACTAGCCCTATGCCTAGTCCTGGAAGGAAACATTTGTTAGGTCATGAAGGCAAGTTTAATGTGGTAGCCTGCCCAAGGCATGTAATGCCTTCTAGTCTATCATTGAATCTCTTGGACCCTAACATGAAAGGTTCACAAGACAGTGATGTAACTTACCATGGTAGGTGGAATGTGAGGTATGGCGCATTTGGTGATTACCTTGTGCTTCCTGCTCAGAAAGAAGAGCATAAGAGGCATGGAAGCCTGTTGATGCCACCGCCTCCACCCCCAACTCAACATGATAGCCCTGGATCAAGAGACCCGATGCAACAACCAACACAGGCAAGATCATGCGAGACTGTTAAAGCGAAAGAAGGGGACTGTAAGCTATTTGGCATCTCACTTATCAGTGGCCCAAGTACACCAGAGCCTTCCACATCAAAAATAAATATGGCATGTAAGCCAGCTGGTCACAAGCATCTTAAATCACAACAGCCTGATACCAATGAAAGTGATTTGAAATCAGAACAATCAAGCGGATCAAAGCTGCTGGATGCTGTAGTTGCTACCGATGACCATGAAAAGCCACCACAAGCATTTCAGCCACATATGAAAGGTGTTCAAGCCATACCACGCAGTGATTCTGCTAGGAGTTGCACTAAAGTTCACAAGAAGGGGATCGCTCTTGGTAGGTCAGTTGACCTTACAAAGTTCAGCAACTATGATGAATTAGTTGCTGAATTAGATGACTTGTTTGAATTTGGAGGGGAATTAAGGTCTTTGAAAAAGGATTGGCTAATTGTCTATACTGATAATGAGGGTGACATGATGCTTGTTGGGGATGATCCGTGGCAGGAGTTCTGTGCCATGTGA 2394 0.4703 MGSTEVPIKGNRVDGTEGSHSSVYNNHNDAWKPAECQNAHSSSTVRDPEEALYRELWHACAGPLVAVPRKGERVFYFPQGHIEQVEASTNQVADQHMPVYDLPSKILCRVINVLLKAEPDTDEVFAQVTLLPESNQDENAVEKEALPSPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPNQELVAKDLLGNEWRFRHIFRGQPRRHLLQSGWSVFVGSKRLVAGDAFIFLRGENGELRVGVRRAMRHQGNVPSSVISCHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPAEFIVPYEQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTVIGLEDADPQRWPKSKWRCLKVRWDETSSIPRPERVSPWKIEPSHAPPVLNPLTLARPKRPRPNAIPSSPDSSVLTREVSSKVTIDPLSASGFPRVLRGPEFSTLRGNLAESYESDTAEKLDEKNAVSTSSTFAPESWTPTGRHEPSCSDLLSGFGINGDRNHLSLVDQTSPMPSPGRKHLLGHEGKFNVVACPRHVMPSSLSLNLLDPNMKGSQDSDVTYHGRWNVRYGAFGDYLVLPAQKEEHKRHGSLLMPPPPPPTQHDSPGSRDPMQQPTQARSCETVKAKEGDCKLFGISLISGPSTPEPSTSKINMACKPAGHKHLKSQQPDTNESDLKSEQSSGSKLLDAVVATDDHEKPPQAFQPHMKGVQAIPRSDSARSCTKVHKKGIALGRSVDLTKFSNYDELVAELDDLFEFGGELRSLKKDWLIVYTDNEGDMMLVGDDPWQEFCAM 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco1000751g0001 797 Gene3D - 719 797 - -
Acco1000751g0001 797 MobiDBLite consensus disorder prediction 610 625 - -
Acco1000751g0001 797 MobiDBLite consensus disorder prediction 469 489 - -
Acco1000751g0001 797 FunFam Auxin response factor 321 393 - -
Acco1000751g0001 797 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 50 797 IPR044835 GO:0003677|GO:0006355|GO:0009725
Acco1000751g0001 797 Pfam AUX/IAA family 722 795 IPR033389 -
Acco1000751g0001 797 SUPERFAMILY DNA-binding pseudobarrel domain 154 287 IPR015300 -
Acco1000751g0001 797 Gene3D - 155 260 IPR015300 -
Acco1000751g0001 797 ProSiteProfiles B3 DNA-binding domain profile. 158 260 IPR003340 GO:0003677
Acco1000751g0001 797 MobiDBLite consensus disorder prediction 383 423 - -
Acco1000751g0001 797 ProSiteProfiles PB1 domain profile. 724 797 IPR000270 GO:0005515
Acco1000751g0001 797 FunFam Auxin response factor 156 260 - -
Acco1000751g0001 797 MobiDBLite consensus disorder prediction 1 26 - -
Acco1000751g0001 797 Pfam B3 DNA binding domain 158 259 IPR003340 GO:0003677
Acco1000751g0001 797 SMART B3_2 158 260 IPR003340 GO:0003677
Acco1000751g0001 797 Gene3D - 321 392 - -
Acco1000751g0001 797 MobiDBLite consensus disorder prediction 664 688 - -
Acco1000751g0001 797 MobiDBLite consensus disorder prediction 462 489 - -
Acco1000751g0001 797 CDD B3_DNA 156 258 IPR003340 GO:0003677
Acco1000751g0001 797 SUPERFAMILY CAD & PB1 domains 726 795 - -
Acco1000751g0001 797 MobiDBLite consensus disorder prediction 588 628 - -
Acco1000751g0001 797 Pfam Auxin response factor 284 366 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco1000751g0001 1 797 B3 DNA Binding Superfamily AT5G62000 61.017 0.0 956
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Acco1000751g0001 AUX_IAA 1.7e-08 CL0072