Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco1000636g0001 ATGTATTGCTTTCACTACTTCACTAGACATACGAGGCGAAGGTCATTAGAACCTGAGCTTAAAGAAGAATTGAAGTCCCAAAACTCTGAGGTCAATAGAATCACCAAATCTTTGTCCGCATCAATCTCACCGCGTGGGATTCCAGAATTGTATCAAGAGAAGGCTCACAATTTGCGTGATTTCTCCTTCGCTGAACTCCAGCGAGCCACGAATAATTTCAGTAGGCTTTTGAAGATTGGTGAAGGTGGGTTTGGGAGTGTCTATAAAGGTTCAATCCAGGCCAATAAAAAGGAGTTTATTTCGGTTGCCATCAAGAGGCTTGACCCTGATGGATTCCAGGGTCATAAGCAATGGTTAGCTGAAGTTCAGTTTCTTGGTGTTGTGGCGCACCCAAATCTTGTGAAACTCATCGGATATTGCGCTGTGGATACTGAAAGAGGGATCCAGAGACTTCTTGTATATGAATACATGCCAAATAAAAGTTTGGAAGATCATCTTTTTAACAAGGCATACGATCCTCTTCCTTGGAAAACAAGACTTGAAATAGCCCTTGGAGCAGGTCGAGGGTTAGCCTATCTCCATGAAGAATTAGAAGTTCAGGTGATATATAGAGATTTTAAAACCTCAAATGTATTAATGGACGAAAATTTTAGGCCAAAACTTTCTGATTTTGGACTTGCTAGGGAGGGACCAATAGCTGGGCATACCCATGTTTCAACTGCAGTGATGGGAACGTATGGTTATGCTGCTCCAGATTACATTGAGACAGGCCATCTCACTACAAAGAGTGATGTATGGAGCTTTGGAGTGGTTCTCTATGAAATTCTTACCGGGAGGCGATCGCTGGATCGAAACCGGCCAAAGACAGAGCAGAAACTCTTGGAGTGGGTGAAAACTAATAGAAGAAATTTCAGCTTGATAATTGATCCAAGGCTTGAAGGTCAGTATTCCATAAACGTAGCACGAAATGTCACCAAGCTCGCAGATGATTGTCTGAGTAAAAGTGCGAAAGACCGACCGAGGATGAGTCAGGTGGTGGAGAGACTGAAGCAGATAATCATAAATGCAGATGAATCTGATCCTGATGAGAAAAATATTAACCTGTTTGAAAATGGTGATTTGCTTGATCAAGAAGAAAAGTCAAATCAACCAAACCCTCCAATGTTGTGGCAAAGGAGGATGGCCCATCTTGCAAAACTTGGTGAGCATGTGGGGACTGCTATAGGAAGAAGATTTATGATCCTACAAAAGACCAAATCTGATTCTTAG 1269 0.4216 MYCFHYFTRHTRRRSLEPELKEELKSQNSEVNRITKSLSASISPRGIPELYQEKAHNLRDFSFAELQRATNNFSRLLKIGEGGFGSVYKGSIQANKKEFISVAIKRLDPDGFQGHKQWLAEVQFLGVVAHPNLVKLIGYCAVDTERGIQRLLVYEYMPNKSLEDHLFNKAYDPLPWKTRLEIALGAGRGLAYLHEELEVQVIYRDFKTSNVLMDENFRPKLSDFGLAREGPIAGHTHVSTAVMGTYGYAAPDYIETGHLTTKSDVWSFGVVLYEILTGRRSLDRNRPKTEQKLLEWVKTNRRNFSLIIDPRLEGQYSINVARNVTKLADDCLSKSAKDRPRMSQVVERLKQIIINADESDPDEKNINLFENGDLLDQEEKSNQPNPPMLWQRRMAHLAKLGEHVGTAIGRRFMILQKTKSDS 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco1000636g0001 422 SUPERFAMILY Protein kinase-like (PK-like) 56 350 IPR011009 -
Acco1000636g0001 422 Pfam Protein kinase domain 75 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco1000636g0001 422 ProSitePatterns Protein kinases ATP-binding region signature. 79 105 IPR017441 GO:0005524
Acco1000636g0001 422 CDD STKc_IRAK 79 352 - -
Acco1000636g0001 422 PANTHER OS01G0588500 PROTEIN-RELATED 33 352 - -
Acco1000636g0001 422 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 48 156 - -
Acco1000636g0001 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Acco1000636g0001 422 FunFam PTI1-like tyrosine-protein kinase 3 157 363 - -
Acco1000636g0001 422 Gene3D Transferase(Phosphotransferase) domain 1 157 373 - -
Acco1000636g0001 422 Gene3D Phosphorylase Kinase; domain 1 47 156 - -
Acco1000636g0001 422 ProSiteProfiles Protein kinase domain profile. 73 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco1000636g0001 1 349 Glycoside Hydrolase AT3G07070 45.580 5.89e-95 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Acco1000636g0001 Pkinase 6.3e-46 CL0016