Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco1000577g0019 ATGTCCGCCGCCAGTCTTTCTGTCCTTGACCTGCACAAGCGCTATGGCGACCGGGAGGTGCTCAAGGGGGTCTCGCTGTCGGCCAAGCCCGGCGATGTGATCACCCTGATCGGCTCCAGCGGCTCCGGCAAAAGCACCTTCCTGCGCTGCCTGAACCTGCTGGAGCAGCCCTACCAGGGCCAGCTGCGCCTGGGCGATGAAGAACTCAAGCTCGTCAAGGACCGCGACGGCAGCCTGCGCGCGGCGGACGCCGCGCAACTGCAGCGCTGGCGTGCCCGTCTTGCGATGGTGTTCCAGAACTTCAATCTGTGGGGCCACCGCACGGTGCTGGAGAACGTGATCGAGGCGCCGGTGCATGTGCTGAAGCAGCCCCGCGCCCAGGCGATCGAGAAAGCGGAAGCGCTGCTGGCCCGTGTGGGGGTGGCCCATCGCAAGGATGTGTATCCGGCGCAGCTGTCCGGCGGCGAGCAGCAGCGGGTGGCGATTGCCCGTGCCCTGGCGGTGGAACCGGAAGTGATGCTGTTCGACGAACCCACGTCGGCGCTCGACCCGGAGCTGGTGGGCGAAGTGCTCAAGGTCATGCGGGACCTGGCTGCGGAAGGCCGCACCATGATCGTCGTGACCCATGAAATGGGCTTTGCACGCGAGGTGTCCACCCACACGATGTTCCTGCATCAGGGCCGGGTGGAAGAACAGGGCCCTCCGCGTGAGGTGCTGACCTCGCCGCAAAGCGAGCGGCTGAAGGCCTTCCTGAGTGGTGGATTGAAGTGA 771 0.6589 MSAASLSVLDLHKRYGDREVLKGVSLSAKPGDVITLIGSSGSGKSTFLRCLNLLEQPYQGQLRLGDEELKLVKDRDGSLRAADAAQLQRWRARLAMVFQNFNLWGHRTVLENVIEAPVHVLKQPRAQAIEKAEALLARVGVAHRKDVYPAQLSGGEQQRVAIARALAVEPEVMLFDEPTSALDPELVGEVLKVMRDLAAEGRTMIVVTHEMGFAREVSTHTMFLHQGRVEEQGPPREVLTSPQSERLKAFLSGGLK 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco1000577g0019 256 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 250 IPR027417 -
Acco1000577g0019 256 ProSitePatterns ABC transporters family signature. 152 166 IPR017871 GO:0005524|GO:0016887
Acco1000577g0019 256 PIRSF ABC_ATPase_HisP 2 256 IPR030679 GO:0003333|GO:0015424
Acco1000577g0019 256 PANTHER AMINO ACID IMPORT ATP-BINDING PROTEIN 4 252 - -
Acco1000577g0019 256 Gene3D - 1 255 IPR027417 -
Acco1000577g0019 256 SMART AAA_5 30 228 IPR003593 GO:0016887
Acco1000577g0019 256 Pfam ABC transporter 21 180 IPR003439 GO:0005524
Acco1000577g0019 256 CDD ABC_HisP_GlnQ 6 229 - -
Acco1000577g0019 256 FunFam Amino acid ABC transporter ATP-binding component 4 255 - -
Acco1000577g0019 256 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 6 251 IPR003439 GO:0005524
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco1000577g0019 17 240 Calmodulin-binding Proteins AT2G36910 34.167 3.12e-23 96.7