Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco1000561g0011 ATGCAGACCGGTGGAATAACGCCACAGCACCGGCTCCGCCCCCTCTTCCGCCGGCAGCACGTAGACCGACAGACGGCCGCTGCCGCGCTTCAGGCCCAGCTCGATGGCTTCCAGTGCCCGCGCCTGTTCCACGCCCTGCACCCGGAAGCGGTCGGCGACCACATCCAGCACCTTGCGGCCGTCCTTGAGCCGCTCGGCCTGCACCCGGGTGAAACCGGAGGCCGACAGCCATTGCTGCACCTCCTCCGGGCTGACCGTCTCCGGCAGCTCGACCGGGAAGGTCAGCACCAGACGCGGATCCTCATCGCGGGTGCGCGCCAGCAGATCGGCGTAGATGGTTTGCGGCGTGTCGTGCCGCACCGGCAGGGCGGTGTCGCGGTCGAAGAGCTCCGCACCGCGCGCGAACAGCAGCTTCAGGTGGTCGTTCAGCTCCGTCATCGTGCCGACGGTGGAACGGCTGGGATTACCCCAAGTCAAGGACGACGGGGGCGACAACACATGGATAGACAAGACGGCCATCTTTTTCCCAAGACCCCTTTGGTCTTGATGGCGTCTGACGCCTCCGCCTCCCCCAGCCCGGCGTCCGGCCCGAGCACGGACGCCAGCACCTCCGGTCAGCGTCCCGAACCCGGGGAGAGCTTTGTGTTGCTGGTGGAAGACAACCCGATCAACCAGGTGGTGGCGCTGGAGTTCCTGGCGCTGATGGGCTTGAAGACCCAGCTGGCTCGCAATGGACAGGAAGCGCTGGACCTGTGTGAGCGTGAAGCACCCAGCCTCGTGCTGATGGACATCCAGATGCCCGGCATGGACGGGCTGGAATGCGCGCGCCCACACGCGCGCTATATTGCCCAGGGCCGGCTGCCGCGGTTCCCGATCCTGGCGCTGACGGCGCATGCGCTGGACAGCGACGTGGCCGACAGCCTCAAGGCCGGCATGGATGAACACCTGACCAAGCCGCTCGACTTCCTGACCCTGCGGCGCCGTCTGGCCCGCTGGCTGGACCTGCCCCAGCTCAACGACTGA 1023 0.6725 MQTGGITPQHRLRPLFRRQHVDRQTAAAALQAQLDGFQCPRLFHALHPEAVGDHIQHLAAVLEPLGLHPGETGGRQPLLHLLRADRLRQLDREGQHQTRILIAGARQQIGVDGLRRVVPHRQGGVAVEELRTAREQQLQVVVQLRHRADGGTAGITPSQGRRGRQHMDRQDGHLFPKTPLVLMASDASASPSPASGPSTDASTSGQRPEPGESFVLLVEDNPINQVVALEFLALMGLKTQLARNGQEALDLCEREAPSLVLMDIQMPGMDGLECARPHARYIAQGRLPRFPILALTAHALDSDVADSLKAGMDEHLTKPLDFLTLRRRLARWLDLPQLND 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco1000561g0011 340 Pfam Response regulator receiver domain 215 329 IPR001789 GO:0000160
Acco1000561g0011 340 SUPERFAMILY CheY-like 215 337 IPR011006 -
Acco1000561g0011 340 PANTHER HYBRID SIGNAL TRANSDUCTION HISTIDINE KINASE J 189 334 - -
Acco1000561g0011 340 MobiDBLite consensus disorder prediction 188 209 - -
Acco1000561g0011 340 SMART REC_2 213 329 IPR001789 GO:0000160
Acco1000561g0011 340 ProSiteProfiles Response regulatory domain profile. 214 333 IPR001789 GO:0000160
Acco1000561g0011 340 MobiDBLite consensus disorder prediction 150 172 - -
Acco1000561g0011 340 CDD REC_hyHK_CKI1_RcsC-like 215 329 - -
Acco1000561g0011 340 MobiDBLite consensus disorder prediction 186 210 - -
Acco1000561g0011 340 Gene3D - 215 340 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco1000561g0011 215 321 Histidine Kinase Gene Family AT2G17820 35.714 1.09e-14 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco1000561g0011 Response_reg 1.7e-21 CL0304