Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco1000420g0019 ATGATGCCGCGGGTGGACGGGATCGCGCTGCTCGAGCGGCTGCGCGGCGACGCGCGATCGGTGCCCGTCATCATGCTGAGCGCGCGCGGCCAGTCCGACGACAAGATCAGTGGCCTCGCCGCCGGCGCCGACGATTATGTCGTCAAGCCGGTCGAGGCGGCCGAACTGCACGCGCGGCTGCAGCGGTGGTGCGCGGCCGGCAGTGGACGCGCGAGGCGAGCGACACGCTGCGCGCGGGGCGATATCGTGGTCAGCCCGTCGCGCTTCCGGGCGTGGCGCGACGAAAAGCCGCTCGACCTCGCCAAGCTGGAGCTCAAGCTGCTCGCCGAACTGGGTGCGCAACGCCGATACGGTGCTGACGCGCGCGATGCTGATCGAGCGGGTGTGGGGGTACGATTTCGAGCCCGACACCAATCTGGTCGACGTCTACATCCGCCGCCCTGCGCCAAAAGCTGA 456 0.6996 MMPRVDGIALLERLRGDARSVPVIMLSARGQSDDKISGLAAGADDYVVKPVEAAELHARLQRWCAAGSGRARRATRCARGDIVVSPSRFRAWRDEKPLDLAKLELKLLAELGAQRRYGADARDADRAGVGVRFRARHQSGRRLHPPPCAKS 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco1000420g0019 151 CDD REC_OmpR 1 50 - -
Acco1000420g0019 151 PANTHER REGULATOR OF RPOS 1 116 IPR039420 -
Acco1000420g0019 151 Gene3D - 1 144 - -
Acco1000420g0019 151 ProSiteProfiles Response regulatory domain profile. 1 64 IPR001789 GO:0000160
Acco1000420g0019 151 SUPERFAMILY CheY-like 1 67 IPR011006 -
Acco1000420g0019 151 Pfam Response regulator receiver domain 1 60 IPR001789 GO:0000160
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco1000420g0019 2 57 Response Regulator Gene Family AT5G58080 48.214 2.95e-07 47.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco1000420g0019 Response_reg 1.2e-14 CL0304