Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco1000362g0017 ATGGACGCCGCCAGCCACACTGGCGTCGACGACGTGCGCGAGATCATCGACGCGGCGCGCTATGCGGCGGTCAGCGCGCGCTACAAGATCTACATCGTGGACGAGGTCCACATGCTGTCGAAGAATGCGTTCAACGCGCTGCTGAAGACGCTTGAGGAGCCGCCCGCGCACGTCAAATTCCTGTTCGCCACCACGGAGGTGAACAAGGTGCCGATCACGGTGCTGTCCCGCTGCCAGCGGTTCGACCTGCGGCGCATTTCGGCGGAGCAATTGGCCGAGCATTTCGCCTTCGTCTGCCGCGAAGAGGGCGTCGAGGCGGAGCCCGAAGCGCTGATGCTGATCGCGCGCGCGGCGGAAGGGTCGGCGCGCGACGGCCTGTCGATCCTGGATCAGGCGATTGCGCATGCCGGGCTGGAGGGTGGCGGGGTCAGCGCCGCGGCGGTGCGGCAGATGCTGGGCCTGTCGGATCGCGGTGCGGTGCGCGACCTGATGGCGTTACTGCTGGCCGGCGATGCGGGCGGCGCGCTCGCCAGCCTGCGGCGGCAATATGACTATGGCGTCGATCCGCAATCGGTGCTGCGGTCGCTGCTCGAGACGGTGCACGGCATCACGCTAGCCAAGGTCGGCACGGCGGAGGACCCCGCCCAGCCGGTCGAGGAGCGGCAGGCGCGCAGCGAATGGGCGGCGAGCCTGTCCTTCCCCGCGCTGCATCGCCTGTGGCAGCTGATGCTGAAGGGGCATGACGAGGTCGCCAAGGCGGTGTTGCCGATCGAGGCGGCGGAGATGGCGCTGCTGCGCGTCATCCATGCGTCCAGCCTGCCCGATCCGGGCGAGTTGGCGAAGCAGATCGCGAGCGGCAAGATCGGTGGTGCTGCGCCCGCGTCCGCCCCGGCGGCGGCCCCGGCGCCCCGCGCCGGTGTGGAAGATAGCCTTGGAGGATGCGCCCGGCGCGCCTACCTTGCGCGAGAAGGACAAGGCCGAGGAAGAGGCGACGCGGCAGGCGATCCTGGCGACCCCGCTGGTGCAGGCGGCGTTGGCGGCGTTTCCCGACGCGGAGCTGGAAACCTGGCCCGGTAA 1077 0.6982 MDAASHTGVDDVREIIDAARYAAVSARYKIYIVDEVHMLSKNAFNALLKTLEEPPAHVKFLFATTEVNKVPITVLSRCQRFDLRRISAEQLAEHFAFVCREEGVEAEPEALMLIARAAEGSARDGLSILDQAIAHAGLEGGGVSAAAVRQMLGLSDRGAVRDLMALLLAGDAGGALASLRRQYDYGVDPQSVLRSLLETVHGITLAKVGTAEDPAQPVEERQARSEWAASLSFPALHRLWQLMLKGHDEVAKAVLPIEAAEMALLRVIHASSLPDPGELAKQIASGKIGGAAPASAPAAAPAPRAGVEDSLGGCARRAYLAREGQGRGRGDAAGDPGDPAGAGGVGGVSRRGAGNLAR 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco1000362g0017 358 Pfam DNA polymerase III subunits gamma and tau domain III 143 283 IPR022754 GO:0003887
Acco1000362g0017 358 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 129 IPR027417 -
Acco1000362g0017 358 CDD HLD_clamp_pol_III_gamma_tau 86 153 IPR045085 -
Acco1000362g0017 358 SUPERFAMILY post-AAA+ oligomerization domain-like 156 278 IPR008921 GO:0003677|GO:0006260
Acco1000362g0017 358 NCBIfam DNA polymerase III subunit gamma/tau 1 268 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Acco1000362g0017 358 Gene3D - 1 83 IPR027417 -
Acco1000362g0017 358 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 4 211 - -
Acco1000362g0017 358 MobiDBLite consensus disorder prediction 322 358 - -
Acco1000362g0017 358 Gene3D - 154 272 - -
Acco1000362g0017 358 FunFam DNA polymerase III subunit gamma/tau 87 153 - -
Acco1000362g0017 358 Gene3D - 86 153 - -
Acco1000362g0017 358 Pfam DNA polymerase III, delta subunit 7 86 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco1000362g0017 28 171 Core DNA Replication Machinery Family AT1G21690 25.694 2.13e-12 65.5