Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco1000336g0017 ATGCGCCAGCTTCCACCGACGATCCAGGAGGGGCCGCAAGGCCCCTCTTGTCGTTTGGGTCCCCCCAACCGTTCTACACTGGATCATCGCGATCGACATCCTGCTCGGTGGCGACAACGCCGTCGTGATTGCGCTGGCCTGCCGCAAGCTGCCGCCCAAGCTCCGCACCCAGGGCATCCTCTGGGGCACCGCGGGCGCCATCATCCTGCGGGTCGTCCTGATCTTCTTTGCGCTGCAACTGCTGGCGCTGCCCTTCCTGAAGCTGGTCGGCGGCCTGCTGCTGTTCTGGATCGGCATCAAGCTGATGCTGCCGGAAGAAGACGACGACCACGCCAACATCCAGGCCAGCGACAAGCTCTGGGCAGCGGTGAAGACGGTGATCGTGGCCGACTTCGTCATGTCACTGGACAACGTGATCGCCATCGCCGGTGCGGCGGAAGGCGCGGGTCACGGCCATCAGCTGATCCTGGTGATCTTCGGCCTGCTGGTCTCCATCCCGATCATCGTCTGGGGCAGTCAGCTGGTCATCAAGCTGATGGACCGCTATCCCACCGTCATCACCCTGGGCGCGATGCTGCTGGGCTGGATTGCGGGTACGATGCTGGTAACCGACCCGGCGCTGGCCGCCTGGGTGCCCAATCAGCCGGGCAGCAAGCCGGGCACGACCGTGGTGGTGCCTTGGCTGCAATACGGTGCCGGGGTGGTCGGTGCGCTGTTGGTGCTGGGCACCGGCAAGCTGCTGGCGGGCCGCCGCGCGGCCCAGGACTGAATCTACGCTGCCCCCTTCCCGCATCCACCCTGACCCGAGCACCACCATGTCATGACCGCTGCAGGGTTCTTCAAGCGACTTCTGGGACGTACCCTTCCGCCCCCGGCGGTGGAAGACCTGCCCAGGAGCGCTTCATCCGCGAAGCGAGTGCCGCCCAACATCTGGAACATCCGGACATCCTGCGGGTGCTGGACGCCGGCGAAAGCGGCGGCGACACCTGGATCGCCATGGAACTGCTGGTGGGGCACGACCTCAGCCACTACACCCGTGACGGCCATCGGCTGCCGCTCCGGGAAGTGCTGCTGCTGGGCGCCCGCCTGGCCCGTGCCCTGCATTACGCCCACAGCCACGGCGTGGTGCACCGCGACATCAAACCTGCCAATGTCATGCTGGACCGGGCCACCGGCAGCGTGAAGATCATGGATTTCGGCATCGCCCGGGTGGCGGACGGCAGCCGTACCCGGACCGGACTGGTCCTGGGGACCCCCTCCTACATGTCCCCGGAACAACTGGCGGGACTGAAGGTGGACGGCCGCAGCGACCTGTATTCTTTAGGCGTCATGTTGTTTCAGCTTTTGACAGGGCATCTGCCCCATCAATCGGAGTCCATGGCGTCCCTGATGCACCAGATTGCCAATCAACCCCCGCCCGATGTCCGGCTGTACCGCGCGGACCTGCCGGAATCGCTGGCGATGGTGGTGGCGTTGTCGCTCGAAAAGCGCCCGGAATTGCGATATGCGTCCGGTGAACAGCTTGCCCAGGACCTGGAAGCGGTGCTGGCCGACCTGCCGGTGGAGCTGGCCAACAGCAAGGGCGAGGTCTGCGCAACCCCCTCAAGTGGGAACGCCAAGCGCACCGATGAGGGCGATCCTGCGACACCCCCCCCGACAACGGGGCTGGCTTTCGAGGAAACTTTACGCCTGCGGGGTAGCGCGGCGGTGCACAATCATCCTCCCCCAGACGATCCCTCCCGCAACACATGA 1752 0.6558 MRQLPPTIQEGPQGPSCRLGPPNRSTLDHRDRHPARWRQRRRDCAGLPQAAAQAPHPGHPLGHRGRHHPAGRPDLLCAATAGAALPEAGRRPAAVLDRHQADAAGRRRRPRQHPGQRQALGSGEDGDRGRLRHVTGQRDRHRRCGGRRGSRPSADPGDLRPAGLHPDHRLGQSAGHQADGPLSHRHHPGRDAAGLDCGYDAGNRPGAGRLGAQSAGQQAGHDRGGALAAIRCRGGRCAVGAGHRQAAGGPPRGPGLNLRCPLPASTLTRAPPCHDRCRVLQATSGTYPSAPGGGRPAQERFIREASAAQHLEHPDILRVLDAGESGGDTWIAMELLVGHDLSHYTRDGHRLPLREVLLLGARLARALHYAHSHGVVHRDIKPANVMLDRATGSVKIMDFGIARVADGSRTRTGLVLGTPSYMSPEQLAGLKVDGRSDLYSLGVMLFQLLTGHLPHQSESMASLMHQIANQPPPDVRLYRADLPESLAMVVALSLEKRPELRYASGEQLAQDLEAVLADLPVELANSKGEVCATPSSGNAKRTDEGDPATPPPTTGLAFEETLRLRGSAAVHNHPPPDDPSRNT 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco1000336g0017 583 SMART serkin_6 199 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco1000336g0017 583 Gene3D Transferase(Phosphotransferase) domain 1 337 525 - -
Acco1000336g0017 583 MobiDBLite consensus disorder prediction 1 73 - -
Acco1000336g0017 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 375 387 IPR008271 GO:0004672|GO:0006468
Acco1000336g0017 583 MobiDBLite consensus disorder prediction 24 43 - -
Acco1000336g0017 583 CDD STKc_PknB_like 297 514 - -
Acco1000336g0017 583 MobiDBLite consensus disorder prediction 88 195 - -
Acco1000336g0017 583 SUPERFAMILY Protein kinase-like (PK-like) 297 510 IPR011009 -
Acco1000336g0017 583 FunFam Serine/threonine protein kinase 337 522 - -
Acco1000336g0017 583 Pfam Protein kinase domain 298 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco1000336g0017 583 MobiDBLite consensus disorder prediction 92 109 - -
Acco1000336g0017 583 ProSiteProfiles Protein kinase domain profile. 199 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco1000336g0017 583 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20-RELATED 297 531 - -
Acco1000336g0017 583 Gene3D Phosphorylase Kinase; domain 1 284 335 - -
Acco1000336g0017 583 MobiDBLite consensus disorder prediction 529 555 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco1000336g0017 301 482 MAP Kinase Kinase Kinase AT3G63260 32.039 4.50e-25 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Cr-4 Acco1000336g0017 Pkinase 8.9e-39 CL0016