Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco1000336g0002 ATGGCATCCAAAGACCACGATCAGGCATTGACCGGGCGTCCGGCTTCACACACCGCGCAAGCGGATGGGCATGGGCATGGGCATGGGCATGGGCATGGGCATGGGCACGACCACGATCACGATCACGATCACGATCATGGTCATCCGCACACCCCTGCTTGCGCCGGCGCCGCAAACACCGCCCATCACCACGCACCTTCATCCGCCGGAGGCTGCCATGCGCCCGCCACCGGCCAGGCGTCCGCCTGCTGCGCACCGTCGCCAGACCTCGCCGCCGCCGCGTGCTGCGGCCCGGCCCACCCGTCCGCGCCGCCGTCTCCGGCGCCGAATGCCGCCGAACTGGCCGGCACCGTCCGCAGCCGCTACTACATCGGCGGCATGGACTGCCCCACCGAAGAAGCGCTGCTGCGCCGGCGTCTGGACCGGGAGCCTGGCGTGGTGGCCCTGCAGTTCGACCTGATCAACCGGGTGATGGATGTCCATCACCGCCTGGCCGACGACGCGCCGCTGCGCAAGGCCATCGCCGACACCGGCATGCAAGCCGAGCCGATGGCCGAGACCGCTCCGCCGCCCGCCCCCATGCCGGCGGTCAGCCGGTCCCTGCGCTGGCGCATGGCGGTGGCGGGGGTCGCCGCTCTCAGTGCCGAAGGTCTGGCCTTCGCCGGCTGGCATGAAGCCGGCCTGCCGATCGTGGTGCTGTCCCTGGCGGCCATGCTGCTGGGCGGCCTGCCGACCCTGCGCAAGGGCTGGATCGCCCTGCGCAGCGTCACCCTGAACATCCACCTCCTGATGAGCCTGGCGGTCATCGGCGCCGTGGTGCTGGGCCAGTGGCCGGAGGCGGCCATGGTGGTGTGGCTCTTCGGCCTCTCCGAGATGATCGAAAGCCTGAGCCTCGCCCGGGCGCGCGACGCCATCCGGGCCCTGTCGCAGCTCGCCCCGGAAACCGCCTGGGTGCGGGGCGATGACGAAGGCACGGGCGACCCGTTCAGCCGGCAGCCGGTGGACGCGCCTCAACGAAGCGGCGCTGACCGGGGAGGCCATGCCGGTGGACAAGGCCCCGGGCGACCCACTGCTCGCCGGCAGCGTCAACGGCGACGGCCTGTTGCTGATGCAGGTGACGTCCATCAAGGGCCAGACGCTGCTGGACCGGATGGCGCAGGCGGTCCAGCAGGCGCAATCCCAGCGCGCCCCGAGCCAGGCCTTCATCGACCGCTTCGCCCGTATCTACACCCCGGTGGTCGTGCTGGCGGCCCTGGCGCTGGCGGTGCTGCCGCCGCTGCTGGGCTTCGGGGACTGGCACGACTGGCTCTACAAGGGGCTGGTGCTGCTGGTCATCGCCTGCCCGTGCGCGCTGGTGATCTCGACCCCGGTGACCATCGTCAGCGGTCTGGCCGCCGCGGCCCGGCGCGGCATCCTCATCAAGGGGGGCCTCTATCTGGAGAAGGTACGGCAGCTGCGCATCCTGGCCCTGGACAAGACCGGCACGCTGACGGAGGGACGGCCCGCGCTGGTCGCCGTGCAAAGCTTCGATCCGGCCCTCAGCGAGGACGACGCCCTCCACCTCGCCGCCCGCCTGGATGCGGGCAGTGCGCATCCGCTGGCGCAAGCCATCGTTGCAGCGCAAGCCGAGCGGCTGGCCGCGCGCTGGCGCCGGTGACTCATCTGCAGAACCAGCCGGGGCTAGGCGTCACCGCAGAGATGGAAGGTCGCCGCTTTGCGCTGGGCAATGAGCGCCTGGCCCGTCAGCAGGGCGCGGTGAGCGGGCCGGCACAGGCCGCCGCAGACACTCTGCAGCGCGACGGCCACACGCTGGCCTGGCTGCTGCGGGACGGCGACGTCATCGCCCTGCTGGCGCTGGCCGACACGCCCCGCCCCGCGGCGGCGCCCACGCTGGCCCGGCTGCGCGAGCGGGGACTGGACCTGGTCATGCTCAGCGGCGACCACCGTGCCAGCGCCGAGGCCATGGCCCGACGCCTGGGCCTGCCGGCCGAGGCCGTCCAGGCCCCCCTGCTGCCGCAGGACAAGCTCGATGCGGTGGCCGCGCTGACCGCACGGGGCGCTGTCGGCATGGTCGGCGACGGGGTGAACGATGCCCCGGCCATGGCCCGCGCGGACATTGCCATCGCCATGGGCGCCGCCGGCAGCGCGACGGCCCTGGAAACGGCCGACATCGCCCTGATGGGTGACGACCTCACCCAGTTGCCGGTGCTCATCGACCTGTCCCGCCGCACCGCCCGGGTGCTGACCCAGAACATCGTCCTGGCACTCGGCCTGAAGGTGGTGGTGGCCGGCCTGACGCTGGTGGGCCTGGGGTCCCTGTGGCTGGCGGTGCTCGCCGACGCGGGCGCCAGCCTGCTGGTGGTGCTCAATGGTTTGCGGCTGTTGCGCGAACAGCGCCCAGCCCGGGATTGA 2412 0.7235 MASKDHDQALTGRPASHTAQADGHGHGHGHGHGHGHDHDHDHDHDHGHPHTPACAGAANTAHHHAPSSAGGCHAPATGQASACCAPSPDLAAAACCGPAHPSAPPSPAPNAAELAGTVRSRYYIGGMDCPTEEALLRRRLDREPGVVALQFDLINRVMDVHHRLADDAPLRKAIADTGMQAEPMAETAPPPAPMPAVSRSLRWRMAVAGVAALSAEGLAFAGWHEAGLPIVVLSLAAMLLGGLPTLRKGWIALRSVTLNIHLLMSLAVIGAVVLGQWPEAAMVVWLFGLSEMIESLSLARARDAIRALSQLAPETAWVRGDDEGTGDPFSRQPVDAPQRSGADRGGHAGGQGPGRPTARRQRQRRRPVADAGDVHQGPDAAGPDGAGGPAGAIPARPEPGLHRPLRPYLHPGGRAGGPGAGGAAAAAGLRGLARLALQGAGAAGHRLPVRAGDLDPGDHRQRSGRRGPARHPHQGGPLSGEGTAAAHPGPGQDRHADGGTARAGRRAKLRSGPQRGRRPPPRRPPGCGQCASAGASHRCSASRAAGRALAPVTHLQNQPGLGVTAEMEGRRFALGNERLARQQGAVSGPAQAAADTLQRDGHTLAWLLRDGDVIALLALADTPRPAAAPTLARLRERGLDLVMLSGDHRASAEAMARRLGLPAEAVQAPLLPQDKLDAVAALTARGAVGMVGDGVNDAPAMARADIAIAMGAAGSATALETADIALMGDDLTQLPVLIDLSRRTARVLTQNIVLALGLKVVVAGLTLVGLGSLWLAVLADAGASLLVVLNGLRLLREQRPARD 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco1000336g0002 803 PRINTS P-type cation-transporting ATPase superfamily signature 715 727 - -
Acco1000336g0002 803 PRINTS P-type cation-transporting ATPase superfamily signature 615 626 - -
Acco1000336g0002 803 PRINTS P-type cation-transporting ATPase superfamily signature 637 647 - -
Acco1000336g0002 803 PRINTS P-type cation-transporting ATPase superfamily signature 691 710 - -
Acco1000336g0002 803 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 119 323 - -
Acco1000336g0002 803 NCBIfam HAD-IC family P-type ATPase 591 769 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco1000336g0002 803 MobiDBLite consensus disorder prediction 447 534 - -
Acco1000336g0002 803 SUPERFAMILY HMA, heavy metal-associated domain 116 184 IPR036163 GO:0046872
Acco1000336g0002 803 MobiDBLite consensus disorder prediction 23 50 - -
Acco1000336g0002 803 MobiDBLite consensus disorder prediction 318 424 - -
Acco1000336g0002 803 MobiDBLite consensus disorder prediction 1 78 - -
Acco1000336g0002 803 SUPERFAMILY HAD-like 592 791 IPR036412 -
Acco1000336g0002 803 Gene3D - 609 758 IPR023214 -
Acco1000336g0002 803 Pfam haloacid dehalogenase-like hydrolase 550 705 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco1000336g0002 552 798 Primary Pumps ATPases AT4G30110 36.694 2.49e-43 167