Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco1000166g0002 ATGCATCAGCACATTGCGGGCGCTCCGGGGACCGGAGCAGTCGCCGCTGTCGGTCTGGCGACCCTCGACGTACACGCCGTCGGTATTGGTCATGCCGACCCGCAGGCCCTGGGTGGCGAACATGTGGGCCACCAGGCGCGACGTGGTGGTCTTGCCGTTGGTGCCGGTCACCGCCACGATGGGAATGCGGCCGTCTTCGCCCTTGTCGCCGCGGCTGCCGTGGCCGTAGAGGCTGGCGATGATGGCTTCGCCGACATCCCGGCCCTTGCCGTAGGAGGGGCTCAGGTGCATGCGCAGGCCGGGCGCTGCGTTCACTTCCACGATGCCGCCGTTCTGCTCTTCCAGCGGACGCAGCACGCTTTCCGCCACCACGTCCACGCCGCAGACATGCAGGCCGACCACCTGGGCGGCGGCAATGGCGCGAGCGGCCACTTCCGGATGCACGTCATCGGTCACGTCGGTGGCGGTGCCGCCGGTGGACAGGTTGGCGTTGTTGCGCAGGATGACGCGCTGGCCCTTTTCGGGCACCGAGTCGGGCGTCAGGCCTTGCAGGTCCAGACGCGCGATGGCGATGTCGTCGAGGCGGATCTTGGTCAGCGAGGTCGCATGACCGTCGCCGCGGCGCGGGTCTTCGTTGACCTTGGCCACCAGTTCACGCACGGTGTGGGTGCCGTCGCCGATCACATTCGGCGGGTCGCGGCGGGCGGCGGCGACCAGCTTGTCGCCGACCACCAGCAGGCGGCGACGGAACGGGATGCCGCGCTTGCAGGCGGCCTCGACGATGGAGCCGGTCGAGGGGCCGAGGCGGATGTCTTCATCCGTCTCGCGCAGGGCGCGCACGGCGGCGTCCGCATCGAAGGTGCCGCCGGTGGCGGCCGCGTTGATCAGTTCCACCGCCTTGTCGAAGGCCATGCGGCCGACGTCTTCCTCGCTGTATTCAACGACCACCTGATAGGTGCCCGCTTCGGAGGTGGTGTGGGTGTGGCTGTAGGTCACCGGGCAGCCGGCCTGCGCCTGCAGCGCCAGGGCGGCCTGCTCCAGCACATGGGCCAGGGAGATCGGGGTCTTGGCGCTGCTGGCCGGCCGCAGGGGGCCGACGCCGGGGAAAAGGGCGCGCAGGCGGGCCTCGAAGCCGGCCATGTCGGCGATGGTGCGTTCCGTGTCGCTGCAGTGGACCACCGCCTCAATGGCGGTATGACGGCTCCACATGTTGGGGCCACGAAGTGCGCGGGTGCGAGAGACTTCCATCTGTCGTCTTTCGGTTCGTCTGTTCTTTTATTGGGGCAGTTCGGGCACGAAGGTATCGAGACCGGCCGCGATCAGTTCGGGAGAGATGCCCAGGGCCCAGGCGGTGGCCACCGCGGCCAGCACGGCGTCTGCCGCCACGTCCTGGCCGGCGGCCTTGAAGCGGGCGCGCAGGCTGTCCACATTGGCGCCGGAGGTTTCCGAGCTGCCCTGGGCCAGCACCGCCGCACCGCCCTGCAGGAAGACGCAGCGGCCTTCCTTGGCGCGGTGGTCCACGAGGGCGGCATTGCCGGCGTCCAGCGCGTAGAAGAGCACTTCGCCGTCGGAGAGCGGCGCCATCTCGACCAGGCGAGGCTCGTCCGCATTCAGCACCGCGGCGCCGTCGGCCAGCACCACGTCCACCTGGGTGCGCATCACCTTGTAGAGCTGGTCTTCGGTCAGGATGTCGTGGTTGTCCAGTTCGGGCACCCGGCCCATGTCGGTGACGACGCCGACCTGGCAGCGGTCATAGGCCAGACCGTCGCTCAGGATGATGCCGGCGCTGTTTTCCACGACGATGGCATCCACCGAGCGGTTCATCAGCAGGCGATGGCTGGCGGCCCAGTGGGCGCTGGGCTTGCGTTCCACGCGGCGGGTGCCGAGGAACAGGCCGTCGCCGCAGGCCAGGCCCACGTGGCGGCCATTCAGGTGCAGCAGCCAGGCCACCAGGCGCGAGACCTGCGAGGTGCCCTTCGACCCGGCCACGCCGACGATGGGGATGCGGCCGTTCTCGTCTTCGGCGAACAGGTGGTCGATGATGGCCTGGCCCACCGGCTGCGGCATGCCTTCCGCCGGCTTCAGGTGCATCAGCAGGCCCGGACCGGCATTGACCTCGACGATGGCGCCGCCGGTCTCGGACAGCGGCTTGCCGATGTCGCTGGTGACCAGGTCGACGCCGGCGATGTCCAGGCCGATGGTGCGGGCGGCCAGGGAGACGGCATGCGCCACTTCCGGATGGACCTGCGCGGTGCAGTCGATGGCGACGTTGCCGTTGCGCTGGATCAGCACCCGGCGGCCGGCTTCAGGGATGCCGTCGCCGGTCAGGCCCTGGCGCTGCAGCTCCAGCAGCACCACCGCGTCTTCGCGGATGTCGATGCGGTTGAGCGGGAAATCCTCGGTCAGGCCGCGGCGCGGATCGGTGTTGATCTGCAGGTCGATCAGCTCGATGACGGTATGGGTGCCGTCGCCGGTGATCCAGGCTTCTTCCCCGCGGGCCGCAGCGACCACCTGGCCGCCGACGACCAGCAGCCGGTGCTCCATGCCCGGAATGTAGCTTTCAACCAACACTTCCGAGCCTTCGGCGTCGGCCAGATGGAAGGCGGCTTCCACGTCGGGCTGGCGGCGCAGGTCCAGGGTGACGCCACGGCCATGGTTGCCGTCCGACGGCTTGACCACCACCGGCAGGCCCGTGTCCTGGGCGACGTCCCAGGCCTGTTCGGCCGTCTTGACCGCCTGGCCGGCAGGCACAGGCACGCCGACCGACTTGAGCAGGTCCTTGGTCAGGTCCTTGTCCCGCGCGATGCCTTCGGCGATGGCGCTGGTCATGTCCGTCTCGGCCGTCCAGATGCGGCGCTGGCGGCCGCCGTAGCCCAGCTGGACCAGGTTGCCGTCGTTCAGGCGGATGTGGGGAATGCGGCGATCGGTGGCGGCGGCCACGATGGCGGCGGTGGAGGGGCCGAGGTAGCAGTCGTCCAGCTTGTCCCGGATGGCATGGACAGCGGCGTCCACGTCGAAGGGCTGGTCGTTGATGGTGGCCATCAGCAGCGCATGGCCCTGGGCCAGGGCTTCACGGGCCACCTGCTCGTCCCGGGCGCGGAAGACCATGCGGTAGACGCCGGTCTGGCTGGTGGACCGGGTCTGGCCGAAGCCGGTGGGCATGCCCGCCAGGTTCAGCAGCTCGATGACCACATGCTCCATCACATGGCCCATCCAGGTGCCTTCGGTCAGGCGCTGCAGGAAGCCGCCGCGCTCACCGACGCCGCAGTGGTGCTCCACCAGGGCGGGCAGGCGCTGGGTGAGCCGCTCGGTGAAACCGGGCAGCAGGTGGGAGGGATGGTTTTCCAGGTCCCCGAGGTCCAGCCAGAACAATCACAAATGCAGCATTCACATCCTGTCGTTTCGGCCAGTCCGGCGGCGGAGGCACTTCAAGCGCGACTGCACCCTGGCGAAAACGTCCGGGCCTCGCTGGAGGTTGACCTCGACACCCAATTGCGCTTTTCTTCGGGCGTGCTGCAACTCACGGATCAGCGCCTGCTGGCCGCGGAGCCCGGCGGTGCGTTCCAGGAATGGCCGCTCACCCCCGCCCTGCGCCTGCTGCTGAGCGACCATGCCGGCGTCGGCCTGCTGGAGCTGACGGACGGCCGCGGCCGCCTGGCCCAGTGGCGCTTCACCATGCGGGCCAACCTGCAGGCCCAGCGCTTCCAGGACGCCTTCAACACCCGGGCCGAGCCGGTTCGTGCGCAGAGCGAAGAACCCGAGCTGTGCCCCAGCTGCCAGGCGGTGCTGCCGGAGGACAGCGAGGAATGCCCGAGCTGCGCGCGGCCAGTTGTTGCTCGGTTTCCTGCTGATGATGGGGGCGACCGGCGCCACGCTGGTGGCGCCCTACCTGACCATGCCGCTGATGGACAAGGTGCTGATCCCCTTCCAGCAGGGGCAGCAGATCGATCCGGGGCTGGTGATGCTCTATCTCAGCGGCCTCTTCGGGGCGGCGCTGGTGTCCTGGGTGCTCGGCTGGGCCAAAACCTACATCCTGGCGCTGGTGTCGGAACGGATTGCCGCCGATTTGCGCACTGCCACCTTCCAGCATCTGCTGGGTCTGTCGCTGGAATATTTTGGCTCCAAGCGCACCGGCGACCTGATGAGCCGCATCGGTTCGGAAACCGACCGGATCAGCGTGTTCCTGTCGCTGCATGCGCTGGATTTCATCACCGACTGCCTGATGCTGGGCATGATCACGGTGATCCTGTTCACCACCAATCCCTGGCTGGCACTGGCCACCCTGGCGCCATCAAGGTGGATGGCGTGGACCTGCGTCGTTTCCGCCTGTCGGATTTCCGTCGCCACATCGGCCTGGTGCTGCAGGAGCCGTTCCTGTTCTTCGGGACCATCGCGGAGAACATCGCCTACGGCAAACCGGACGCGACCCGCGAGGAGATCGTGGCTGCCGCCCGTGCCGCCCATGCGCATGAATTCATCCTGCGACTGCCGCAGGGCTATGACTCCCTGGTGGGGGAACGCGGCCAGGGGCTGTCGGGCGGCAAGGTGTGGTCGGAAGATGAAAGGCATGAATTCATCGAGTTCATCTCGTGCAATCCCGATGCTGGGGATGTGATTCCCGGCGGTGAAGGCGCCCGCAAGGTGCGCTGGCAGCGCGAAGGCATGGGCAAGCGAGGGGGTGCACGCATCATCTACTGGCACTTCGTGGACGAACAAGTCGTGCTGCTCGCGATGGTGTATGCCAAATCGGAGCAGGCCAACGTCAAGCTCAAGACTCTGGACATTGAGAAGGTGGCAGCGGCGATCGAGGCCGACGCCGGGGAGGCGCTGCCCGAGCTGCGCGAATCGCTGGCCCAAGCCAAGGCTGGCGCGGTGGGTGAGACATCGAAGCGCTGCGTGACGCCGTCCGCGCCTTTCGCCGATGCGGAAATCGCCCCCCGCGCTGCCGAGATCGACCGCAGCGACCAGTTCCCATGGACCTGTGGCGCCAAGATGGGCGACCTGGGCGTGCTGGGCATCACCGTCCCCGAGGAATTCGGCGGCGCCGGCATGGGCTACCTGGCCCAACATGGTCCGCCATGGAAGAAATCAGCCCGCGCCTCGGCTCGGGCTTCTCCATCGCCAGAAGCTGGACAAGCTGGGCATGCGCGGCAGCCACACCGGCGAGCTGGTGTCAAGGATGTGGAAGTGCCGGCCGAGAATGTGCTGGGCACCGTGGGGGCGGCACCAAGGCATCAGATCTTCGGCGGCAACGGCTACATCAACGAATATCCGCTGGGCCGGCTCTGGCGTGACGCCAAGCTCTACGAAATCGGGGGCGGGTACGTCCGAGATCCGGCGCATGCTGATCGGCCGCGAGCTGTTCGCCGAGACGATCGCGCGTGTGACATCATCATCGTCGGCCACAGCAACTGCGGCGGCGTCCGCGCCGCGTTGCAGGACCTGCGGGTCGGGCTGGTCGATAAACTGGCTGCGTCATGTGCAGGATGTGCGCAATCATCATCAGGACTGGCTGGACCAGCTGCCGGAAGATCAGCGCGTCAATGCCCTGTGCGAGTTGAACGTGCTGGAACAGGCCCGCAACGCCTGCCAGACCACGGTGGTGCAGGACGCCTGGGCCGCGGTCAGTCGGTCACCGTGCATGGCTGGGTCTACGGCCTGCACAACGGCCTGCTCAAGGATCTCAGCGTGTCGGCCCGCCCATGCGGACGACGTCACCCCGGCCTACCGGCGCGCGCTCGAGGCCCTGCACCAGCGTTACGACGCTGCGCGCGGGACCGGACGCCCTGCATCGACACCGACGCCCGTCCCCGCCCCCGCGTCGGCGACGCCGCAGGGCTGACGCCGCCGGCACCGACCGGACCTCCGCGCTCACCCGCGCCCCACCAGCAGGCAGGCCCATGTTTCCTCATGAACTGA 5919 0.6819 MHQHIAGAPGTGAVAAVGLATLDVHAVGIGHADPQALGGEHVGHQARRGGLAVGAGHRHDGNAAVFALVAAAAVAVEAGDDGFADIPALAVGGAQVHAQAGRCVHFHDAAVLLFQRTQHAFRHHVHAADMQADHLGGGNGASGHFRMHVIGHVGGGAAGGQVGVVAQDDALALFGHRVGRQALQVQTRDGDVVEADLGQRGRMTVAAARVFVDLGHQFTHGVGAVADHIRRVAAGGGDQLVADHQQAATERDAALAGGLDDGAGRGAEADVFIRLAQGAHGGVRIEGAAGGGRVDQFHRLVEGHAADVFLAVFNDHLIGARFGGGVGVAVGHRAAGLRLQRQGGLLQHMGQGDRGLGAAGRPQGADAGEKGAQAGLEAGHVGDGAFRVAAVDHRLNGGMTAPHVGATKCAGARDFHLSSFGSSVLLLGQFGHEGIETGRDQFGRDAQGPGGGHRGQHGVCRHVLAGGLEAGAQAVHIGAGGFRAALGQHRRTALQEDAAAFLGAVVHEGGIAGVQRVEEHFAVGERRHLDQARLVRIQHRGAVGQHHVHLGAHHLVELVFGQDVVVVQFGHPAHVGDDADLAAVIGQTVAQDDAGAVFHDDGIHRAVHQQAMAGGPVGAGLAFHAAGAEEQAVAAGQAHVAAIQVQQPGHQARDLRGALRPGHADDGDAAVLVFGEQVVDDGLAHRLRHAFRRLQVHQQARTGIDLDDGAAGLGQRLADVAGDQVDAGDVQADGAGGQGDGMRHFRMDLRGAVDGDVAVALDQHPAAGFRDAVAGQALALQLQQHHRVFADVDAVEREILGQAAARIGVDLQVDQLDDGMGAVAGDPGFFPAGRSDHLAADDQQPVLHARNVAFNQHFRAFGVGQMEGGFHVGLAAQVQGDATAMVAVRRLDHHRQARVLGDVPGLFGRLDRLAGRHRHADRLEQVLGQVLVPRDAFGDGAGHVRLGRPDAALAAAVAQLDQVAVVQADVGNAAIGGGGHDGGGGGAEVAVVQLVPDGMDSGVHVEGLVVDGGHQQRMALGQGFTGHLLVPGAEDHAVDAGLAGGPGLAEAGGHARQVQQLDDHMLHHMAHPGAFGQALQEAAALTDAAVVLHQGGQALGEPLGETGQQVGGMVFQVPEVQPEQSQMQHSHPVVSASPAAEALQARLHPGENVRASLEVDLDTQLRFSSGVLQLTDQRLLAAEPGGAFQEWPLTPALRLLLSDHAGVGLLELTDGRGRLAQWRFTMRANLQAQRFQDAFNTRAEPVRAQSEEPELCPSCQAVLPEDSEECPSCARPVVARFPADDGGDRRHAGGALPDHAADGQGADPLPAGAADRSGAGDALSQRPLRGGAGVLGARLGQNLHPGAGVGTDCRRFAHCHLPASAGSVAGIFWLQAHRRPDEPHRFGNRPDQRVPVAACAGFHHRLPDAGHDHGDPVHHQSLAGTGHPGAIKVDGVDLRRFRLSDFRRHIGLVLQEPFLFFGTIAENIAYGKPDATREEIVAAARAAHAHEFILRLPQGYDSLVGERGQGLSGGKVWSEDERHEFIEFISCNPDAGDVIPGGEGARKVRWQREGMGKRGGARIIYWHFVDEQVVLLAMVYAKSEQANVKLKTLDIEKVAAAIEADAGEALPELRESLAQAKAGAVGETSKRCVTPSAPFADAEIAPRAAEIDRSDQFPWTCGAKMGDLGVLGITVPEEFGGAGMGYLAQHGPPWKKSARASARASPSPEAGQAGHARQPHRRAGVKDVEVPAENVLGTVGAAPRHQIFGGNGYINEYPLGRLWRDAKLYEIGGGYVRDPAHADRPRAVRRDDRACDIIIVGHSNCGGVRAALQDLRVGLVDKLAASCAGCAQSSSGLAGPAAGRSARQCPVRVERAGTGPQRLPDHGGAGRLGRGQSVTVHGWVYGLHNGLLKDLSVSARPCGRRHPGLPARARGPAPALRRCARDRTPCIDTDARPRPRVGDAAGLTPPAPTGPPRSPAPHQQAGPCFLMN 1972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco1000166g0002 1972 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1428 1515 IPR027417 -
Acco1000166g0002 1972 Gene3D Carbonic anhydrase 1793 1901 IPR036874 GO:0004089|GO:0008270
Acco1000166g0002 1972 MobiDBLite consensus disorder prediction 1925 1972 - -
Acco1000166g0002 1972 Pfam Acyl-CoA dehydrogenase, C-terminal domain 1746 1774 IPR009075 GO:0016627
Acco1000166g0002 1972 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1429 1515 IPR039421 -
Acco1000166g0002 1972 ProSitePatterns Acyl-CoA dehydrogenases signature 2. 1746 1765 IPR006089 GO:0003995
Acco1000166g0002 1972 Gene3D - 1627 1716 IPR037069 GO:0016627|GO:0050660
Acco1000166g0002 1972 Gene3D - 1737 1777 - -
Acco1000166g0002 1972 SUPERFAMILY Acyl-CoA dehydrogenase NM domain-like 1637 1689 IPR009100 GO:0016627
Acco1000166g0002 1972 Pfam Acyl-CoA dehydrogenase, N-terminal domain 1639 1689 IPR013786 GO:0016627|GO:0050660
Acco1000166g0002 1972 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 1745 1775 IPR036250 GO:0016627
Acco1000166g0002 1972 MobiDBLite consensus disorder prediction 1925 1939 - -
Acco1000166g0002 1972 MobiDBLite consensus disorder prediction 1284 1327 - -
Acco1000166g0002 1972 MobiDBLite consensus disorder prediction 1693 1725 - -
Acco1000166g0002 1972 Gene3D - 1429 1515 IPR027417 -
Acco1000166g0002 1972 SUPERFAMILY beta-carbonic anhydrase, cab 1796 1899 IPR036874 GO:0004089|GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco1000166g0002 1429 1515 Calmodulin-binding Proteins AT2G36910 54.023 7.76e-20 95.5