Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco1000131g0002 ATGCTGACCGCGATCGCGCACGACCTGCGCACCCCCCTCACCGGCCTACGCCTGCGCGTCGAAACCGCGCCCGAGCCGCAGCGATCGCGCATGGTCGCCGATGTCGACCGCATGCAGGCGATGATCGGCGAGGTGCTGGCCTTCGCCCGCGACGCAGCCGCCCCCGCCGCGATCGTCGAGGTGCGCTCGCTGGTCGCCGCGATCGTCGCGGATGCGCATGACGCCGGGGCCAGCATCCGCCTGCTGCCCGGCGAGGATGCGTGGGTGCGGCTACCCGAACCGGCCTTTCGCCGGGCGGTCGAAAATCTGGTGCGCAACGCGGCCGATTATGCGGGCGGCGGCGACGTCGCGGTGCGGCAGGATGGCGCCGCCGTGCTCGTGTCAGTCACGGACACAGGCCCCGGCATTCCCGCCGCGGATCGCGAGCGCCTGCTGCTGCCCTTCGAACGCGGCGAGGCCTCGCGCAATCGCGGCACGGGCGGGGCGGGCCTCGGCCTCAGCATCGTCCATGACTTCGCCGCGCAGCACCGCGGCACCTTTACGCTGGATGCTGGCCCCGACGGCGGCACGATCGCGACGCTGCGACTGCCGTCCGCCTGA 600 0.7333 MLTAIAHDLRTPLTGLRLRVETAPEPQRSRMVADVDRMQAMIGEVLAFARDAAAPAAIVEVRSLVAAIVADAHDAGASIRLLPGEDAWVRLPEPAFRRAVENLVRNAADYAGGGDVAVRQDGAAVLVSVTDTGPGIPAADRERLLLPFERGEASRNRGTGGAGLGLSIVHDFAAQHRGTFTLDAGPDGGTIATLRLPSA 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco1000131g0002 199 Gene3D - 56 199 IPR036890 -
Acco1000131g0002 199 Pfam His Kinase A (phospho-acceptor) domain 1 52 IPR003661 GO:0000155|GO:0007165
Acco1000131g0002 199 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 2 50 IPR036097 GO:0000155|GO:0007165
Acco1000131g0002 199 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 61 197 IPR036890 -
Acco1000131g0002 199 CDD HisKA 1 46 IPR003661 GO:0000155|GO:0007165
Acco1000131g0002 199 PRINTS Bacterial sensor protein C-terminal signature 160 178 IPR004358 GO:0016310|GO:0016772
Acco1000131g0002 199 PRINTS Bacterial sensor protein C-terminal signature 125 139 IPR004358 GO:0016310|GO:0016772
Acco1000131g0002 199 PRINTS Bacterial sensor protein C-terminal signature 184 197 IPR004358 GO:0016310|GO:0016772
Acco1000131g0002 199 PANTHER SENSOR PROTEIN CREC 1 197 - -
Acco1000131g0002 199 SMART HKATPase_4 91 199 IPR003594 -
Acco1000131g0002 199 SMART HisKA_10 1 54 IPR003661 GO:0000155|GO:0007165
Acco1000131g0002 199 Gene3D - 1 50 - -
Acco1000131g0002 199 ProSiteProfiles Histidine kinase domain profile. 4 199 IPR005467 -
Acco1000131g0002 199 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 93 197 IPR003594 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco1000131g0002 125 190 Histidine Kinase Gene Family AT2G01830 36.364 1.04e-07 49.7