Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco1000130g0010 ATGGTCGCCAAGCGATCCACCGAGTCCACCATGGCACGCGTCGTGAAGATGGTGACCGAGGCGCAGCAGCAGCAGTCCCCCACCCAGTCTTTCACGGCGAAGTTCGAACGCATCTTCGTGCCGACCGTGCTGGGCTTCGTCGGCGCGCTCTTGTTCGCAGGCTTCATCATCGACGAGCCCTTCAGTGCGACGTTCTACCGTGCCATGGCAGTGTTGGTGGCTGCTAGCCCATGCGCGCTTGCCATCTCGGTCCCGAGCGCCGTCCTGAGCGGCGTTGCTCGGGCGGCGCGTGGCGGGGTTCTCATCAAGGGCGGCGCGCCGCTGGAAAACTTGGGGGTCTTGACCGCGATCGCGTTCGACAAGACAGGCACGCTCACGGAAGGCAAACCCAAGCTTGTGGATGTCCAGGCTGCGCCTGGCGTGGAGCAGGATGAACTGCTGGCCGTGGCACTGGCCATCGAGAGCCACAGCGATCACCCGCTGGCAGCCGCCATCGTGTCTGGCGCGAAGGAACGGATGCAGGGAACTGCTCAGGCCCTGAGTGCCGAAGATGTTCACAGCGTCACCGGCAAGGGCGTCAAGGGACGCATTGGCGCCGACGACGTGTGGATCGGCAAGGCCAAGCTCTTCGTGGAAGATGTGGGTGGCCTCCCGCCGGAGGTTTCCAGCATCGATCAGCACCTGATCGAGAAGGGCCGCACGACCATGATCGTCAAGCGAGGCCAGCGCTTCCTGGGCGTCATTGGCGTCATGGACACGCCTCGCCCGGCCGCCGCGGACGTCATGAGCAAGCTTCAAAAGCTTGGCGTCAAGGACCTGATCATGATCTCGGGGGACAACCAGCGGGTTGCCGACGCGGTGGCGAAGTCCGTCGGCCTGAGCGAGGCAAAGGGCGAGTTGATGCCGGACGACAAGGTCGGCTTCATCAAGCAGCTCAGCGCCAATGAGGGCAAGGTGGCGATGGTCGGGGACGGCGTCAACGATGCTCCGGCCATGGCCAGTGCAACGGTCGGGATTGCCATGGGCGCGGCCGGGTCGGACGTGGCGTTAGAGACGGCAGACGTGGCGTTGATGGCGGACGATCTCTCGAAGCTTCCGTTCGTGGTCGGACTGTCGCGCAGGGCGAGCGGCGTCATCAGGCAGAACCTGTGGGTCTCCCTGGGCGTCGTGGCGGTCTTGATTCCGGCCACGCTCTTCGGCTTGAATATCGGCACCGCGGTCCTGTTCCACGAGGGTTCCACCCTCATCGTGGTCATCAACGCGCTTCGCTTGCTCGCCTACGGCGACCAGAAGGCGTCGGACGCATGA 1308 0.6453 MVAKRSTESTMARVVKMVTEAQQQQSPTQSFTAKFERIFVPTVLGFVGALLFAGFIIDEPFSATFYRAMAVLVAASPCALAISVPSAVLSGVARAARGGVLIKGGAPLENLGVLTAIAFDKTGTLTEGKPKLVDVQAAPGVEQDELLAVALAIESHSDHPLAAAIVSGAKERMQGTAQALSAEDVHSVTGKGVKGRIGADDVWIGKAKLFVEDVGGLPPEVSSIDQHLIEKGRTTMIVKRGQRFLGVIGVMDTPRPAAADVMSKLQKLGVKDLIMISGDNQRVADAVAKSVGLSEAKGELMPDDKVGFIKQLSANEGKVAMVGDGVNDAPAMASATVGIAMGAAGSDVALETADVALMADDLSKLPFVVGLSRRASGVIRQNLWVSLGVVAVLIPATLFGLNIGTAVLFHEGSTLIVVINALRLLAYGDQKASDA 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco1000130g0010 435 SFLD C1.7: P-type atpase like 100 374 - -
Acco1000130g0010 435 NCBIfam HAD-IC family P-type ATPase 11 403 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco1000130g0010 435 SUPERFAMILY HAD-like 117 422 IPR036412 -
Acco1000130g0010 435 ProSitePatterns E1-E2 ATPases phosphorylation site. 120 126 IPR018303 -
Acco1000130g0010 435 PRINTS P-type cation-transporting ATPase superfamily signature 346 358 - -
Acco1000130g0010 435 PRINTS P-type cation-transporting ATPase superfamily signature 269 279 - -
Acco1000130g0010 435 PRINTS P-type cation-transporting ATPase superfamily signature 322 341 - -
Acco1000130g0010 435 PRINTS P-type cation-transporting ATPase superfamily signature 118 132 - -
Acco1000130g0010 435 PRINTS P-type cation-transporting ATPase superfamily signature 246 257 - -
Acco1000130g0010 435 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 4 426 - -
Acco1000130g0010 435 Gene3D - 132 216 IPR023299 GO:0000166
Acco1000130g0010 435 SFLD p-type atpase 100 374 IPR044492 -
Acco1000130g0010 435 Pfam haloacid dehalogenase-like hydrolase 115 335 - -
Acco1000130g0010 435 NCBIfam heavy metal translocating P-type ATPase 2 424 IPR027256 GO:0006812|GO:0016020|GO:0019829
Acco1000130g0010 435 Gene3D - 3 131 - -
Acco1000130g0010 435 Gene3D - 234 390 IPR023214 -
Acco1000130g0010 435 Pfam E1-E2 ATPase 2 97 - -
Acco1000130g0010 435 SUPERFAMILY Calcium ATPase, transmembrane domain M 18 112 IPR023298 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco1000130g0010 8 426 Primary Pumps ATPases AT4G30110 33.875 7.85e-67 228