Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco1000118g0023 ATGCCACTTCCGTTCTCACCATTGCTTAATCCGAACGCTGCGCCGCCTGCCACGCGCGTGGCGTCGGACCTCCCACCGCTGATTTCGCTGCAGCAGGTCAGCCGCAGCTTTGAGGGGCCTGGTGGGCAGCGCTTCCATGCCGTGCAGAACGTGGACCTCACAGTGCAGGCCGGCGAGGTGTTGGGCATCATCGGCCGCAGTGGTGCCGGCAAGTCGACGCTGCTGCGGATGATCAATCTGCTGGAACGCCCTGATCAGGGCCGCGTGCAGGTGGGCGGGCAGACGCTGACGGACCTGTCCACCCGGGCGCTTCGCCGTGCGCGGTCCGGCATCGGCATGATCTTTCAGCAATTCAACCTGCTGCAGAACGCGACCGTCGCGGACAACGTCGCCTTGCCCCTGCAACTGCACGGGCGCTGGAGCCGTGCCCAGATCGACGCCCGGGTGGCGGAATGCCTGGCCCAGGTGGGCCTTGTGGACAAGGCGCACGCGTATCCGGCCCAGCTCAGCGGCGGGCAGAAGCAGCGTGTGGCCATTGCCCGCGCGCTCGCGCCGCGTCCTGCGGTGATGCTGTGCGACGAGCCCACCTCGGCGCTGGATGCGGAGACGACGCGGGAGGTGCTGTCCACCTTGGCGGCGGTGAATCGGAACCTGGGCGTCACGCTGGTGATCGTCACGCACGAGTTGAGTGTGGTGCTGAACCTGTGCCAGGCGGGTGGCGGTGATGCAGCAGGGGCAGCTCGTTGA 747 0.676 MPLPFSPLLNPNAAPPATRVASDLPPLISLQQVSRSFEGPGGQRFHAVQNVDLTVQAGEVLGIIGRSGAGKSTLLRMINLLERPDQGRVQVGGQTLTDLSTRALRRARSGIGMIFQQFNLLQNATVADNVALPLQLHGRWSRAQIDARVAECLAQVGLVDKAHAYPAQLSGGQKQRVAIARALAPRPAVMLCDEPTSALDAETTREVLSTLAAVNRNLGVTLVIVTHELSVVLNLCQAGGGDAAGAAR 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco1000118g0023 248 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 237 IPR027417 -
Acco1000118g0023 248 Pfam ABC transporter 49 197 IPR003439 GO:0005524
Acco1000118g0023 248 SMART AAA_5 57 244 IPR003593 GO:0016887
Acco1000118g0023 248 PANTHER AMINO ACID IMPORT ATP-BINDING PROTEIN 20 237 - -
Acco1000118g0023 248 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 28 247 IPR003439 GO:0005524
Acco1000118g0023 248 ProSitePatterns ABC transporters family signature. 169 183 IPR017871 GO:0005524|GO:0016887
Acco1000118g0023 248 Gene3D - 26 238 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco1000118g0023 15 234 Calmodulin-binding Proteins AT2G36910 31.064 1.56e-22 94.7