Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco1000118g0017 ATGTCCCTGCTCCTGATTGCTGCCAGCCCCAGCCTCAAGTCCCGTTCCAGTGCCTTGCTGTCCGCCGCTGCGGAACGCCTGCAGCACCTGGGCCTGGCGCCTGACTGGTTGCGTCTGCGTGAACTGCCGGCCGAGGCCCTGCTGCAGGCCGACCTGAGCCATCCCGCCTTGCGCGAGGCGGTGGAGGCGGTGGCCCGATGGCTTCAAGGGCAAAACGGTGTGGACGCTGGCCACCGGCGGCAGCCCCGCCCATCTGCTGGCGCTGGACTACGGCTTGTTGCCCGTGCTGTCGTCCCTGGGCGCGCGCAGTCATGCGGACAGCGTCTACGCCTGCGATGCGCAAGTGCCCAAGGATGCGGACGGGCACTACCAGATCCAGGACGACATCCAGCGCCGCTTGGCCGCCAGTGCCGCGCAGGTGTTCGAGCGAATGCCGCAGCGTGCGCTGGCGGATGTCTGACATCCGCTCCTGGCTGCGTGACACGTGATGCGTATTCCGTATTGCTTATTGCCTGCTGCGTCGTTGCCCGACGTGTGAAGCCTGCCCCGCCCCCTGGCGCTGCCTCTTTGTCAAAGGTCCCTCCCATGCCCACCTCCTTGTCCCACCGCCGCCGTGTCCTGCGCTTTGCAGCGGCTGTCACCGCGACCGCAGCAACCGCCACACTCGTTCTCGCCGGCTCCGCGAGCCGCGCCTTCGCCCAGGCGCCGACGCCGCATGAACTGCGCATCGGCTTTCAGAAGTACGGCACGCTGACCGTGCTCAAAGCCAAGGGCGATCTGGAGAAACGCCTGGCCCCGCTGGGCGTCACCGTCAAATGGACGGAGTTTCCCGCCGGCCCTCAGCTGCTGGAGGGACTGAATGTCGGCTCCATCGACTTCGGGACCGTGGGCGAAGCGCCGCCCATCTTTGCCCAGGCGGCAGGCGCTGACCTTGTCTACGTGGCGCATCAGCCACCCGCGCCGTCGGCCGAAGCGCTGATCGTGCCCAAGACTTCCACCGTGCGCAGCCTGGCGGATCTCAAGGGCAAGAAAGTCGCGCTGAACAAGGGCTCGAATGTCCACTACCTGTTGGTCAAGTTGCTGGAGAAGGAAGGCTTGAAGTACAGCGACCTGCAGGTGGTCTATCTGCCGCCGGCCGATGCCCGGGCTGCCTTCGAGAGCGGGGCGGTCGATGCCTGGGTGATCTGGGATCCGTTCCTGGCGTCCGCCCAGCGTCAGCTCGGCGCGCGGGTGGTGGCGGACGGCACCGGGGTGGTCAACAACCTCCAGTTCTATCTGGCGTCGCGGCCCTATGCGGACCGCAACCCGCAGGTGGTGGCGGCCATCGTGGATGAACTGGCGCGCCTGGACCGCTGGTCGCAGAGCAACCTGCCCGCGGTGGTGTCCGTGCTGGCGCCGCAGATCGGCCTGGATGCTGCCACCACCGAATTGGCGGCGAGCCGCTTCGCGTATGGCATTCAGCCGATCACCCCGGCGGTGGCGGCCCAGCAGCAGCAGATCGCCGACACCTTCCATCAGCTCAAGCTCATCCCCCATGTTCTGGTTCATCCCCACGCATGGGGACTCCCGCTACCTCGGTACCTCCAAGGGCGCCCGGGTGGCCGACTTCAACTACTACCGCCAGGTGGCGATTGCCGCGGACACGCTCGGCTTCGAAGGTGTGCTGCTGCCCACCGGCCGCAGCTGCGAGGACAGCTGGATCGTCGCGGCCAGCCTGATCGAGGCGACTCGGCGCCTGAAGTTCCTGGTCGCGCTGCGGCCGGGGCTGGTGCAGCCAGTGCAGTCCGCCCGCATGGCGGCGACGCTGGATCGCCTGTCGGGCGGACGCCTGCTGGTCAACCTGCCAGCCATGACGGCGAGGCGGTGGACTTTGACGGCGACCTGCTGCAGGTCAAGGGTGGCAAGCTGCTGTACCCGCCGGTGAATCGGCCGTATCCGCCGGTGTTCTTCGGGGGCTCCTCGGAGCCGGCACATGAATTGGCCGCATCGCAGGTGGACACCTACCTGACATGGGGAGAGCCGCCAGAAGCCGTGGCGCAGAAGCTGGCCGATGTGAAGGCCCGTGCCGCGGCCAAGGGCCGGACGCTGCAATACGGCATCCGCCTGCATGTGATCGTGCGGGAGACGGAAGACGAAGCCTGGCGTGCTGCCGCCGAGCTGGTGCAGCATCTGGACGAGGATGTAGTGGCCGCCGCGCAGGCCAAGTTTGCCAGCATGGATTCGGTCGGCCAGCGCCGCATGGCCGAGCTGCACAAGGGCCGCTTCAACAAGGCCAACATTCGCGAGGGTCTGGAGATTGCGCCCAATCTGTGGGCTGGCGTGGGACTGCGGCTATCCGCATCTGGAAGAAGCCTATCGCTTTGCCGAGCTGGTGTTCCCGCTGCTGCCGCTGGCGGTGCGCGAGAAGCTGACCGCACCGGCACTGACCGGGCCGTTTGGCGAGATCGTCGCCAACAACTATGTGCCGGGCGCGCCGCGTCTGGCCGCGGCGAGCTGAACCATGGGCGGGGCACACAAGGCAGGCCGGGCGCTGCTGCCGTGGCTGGTGCCGCTGCTGATCCTGGTGGCGTGGCAGCTCAGCGCGCAGTGGGGCTGGCTCTCCACCCGCGTGCTGCCGGCGCCATCGGCGGTGGCACGGGCGGCCTGGGAGCTCTCGGCCAGCGGCGAGCTGTGGCAACACCTGGGTGTGAGCACCCGGCGGGCGCTGCTGGGCTTTGCCATCGGCGGTGGACTCGGGCTGGCGCTGGGACTCATCACCGGGTCCTGGCGCTGGGCCGAGACGGCGCTGGACACCACGCTGCAGATGCTGCGGAATGTGCCCGCGCTGGCGCTGATTCCGCTGACCGACGTGGTGCTGGTGGGCATCCTGATTTATGCGCTGCTGGGCAAAGGGGCCGACATCCTGGCGCATGCGCTGGAGCGGACCTGGCTGCGGTGGCATCCGGGGTATCAAGCATGATGACGATGACGGATCTCGATGTGCTGACCGAAAGCGGATGGGCGGAGCTGCAGGACGGGCCGGGACGGCAGGCGACGGCACGGTCTGCGGACGCCGCCGCCGCATCAGCAGCAGCAGCAGCCACCGCCCGCGGTGCGACGGCCGTTCACGGCGCGCTGCAGCGCGTGGCGCCTGCGTCCGCGGCGCCGATCCGGCTGCAGGGCGTGGCCAAGACCTTCGGGGATCGGCCGGTGCTGTCCCATCTGGACCTGGAGATCCGCCCCGGGGAGTTCGTCGCTGTGGTGGGCCGCAGCGGTTGCGGGAAGAGCACGTTGCTGCGCCTGCTCGCCGGGCTGGAGGCACCGAGCGCTGGGATGTTGCAGGTCGGCCCGCCCGAATCGGTGCGATTCATGTTCCAGGACGCCCGGCTGCTGCCCTGGGCCCGGGTGCTGGACAACGTGGCGTTGGGGCTGAAGGGCCCTGAGGCGCGCGAGCGGGCTGCCGCCGCACTGGCGCAGGTGGGACTCTCCGACCGCGGGCAGGAATGGCCGGCGAAGCTCTCGGGCGGTCAACGGCAGCGTGTGGCACTGGCCCGCGCGCTGGTGCATGCGCCGCAACTGTTGCTGCTCGACGAGCCATTGGGCGCCCTGGACGCGCTGACGCGGATCGAGATGCAGCGGCTGATCGAGCGGCTGTGGCTTCGGCAGGGTCTGACCGCTGTGCTGGTGACGCATGACGTGGCCGAGGCGGTGGCTCTGGCGGATCGCGTCCTTCTGATTGAACAGGGTCAGGTCGCGCTGGACTTGCGGATCGACCTGCCACGGCCGAGGCTGCGGGATGCCGCCTTTGCCAGCCTGGAGCAGCAGTTGCTGGATCGGGTGTTGCGGGTGGGGGAAGCGGAGACGGTCTGA 3849 0.6867 MSLLLIAASPSLKSRSSALLSAAAERLQHLGLAPDWLRLRELPAEALLQADLSHPALREAVEAVARWLQGQNGVDAGHRRQPRPSAGAGLRLVARAVVPGRAQSCGQRLRLRCASAQGCGRALPDPGRHPAPLGRQCRAGVRANAAACAGGCLTSAPGCVTRDAYSVLLIACCVVARRVKPAPPPGAASLSKVPPMPTSLSHRRRVLRFAAAVTATAATATLVLAGSASRAFAQAPTPHELRIGFQKYGTLTVLKAKGDLEKRLAPLGVTVKWTEFPAGPQLLEGLNVGSIDFGTVGEAPPIFAQAAGADLVYVAHQPPAPSAEALIVPKTSTVRSLADLKGKKVALNKGSNVHYLLVKLLEKEGLKYSDLQVVYLPPADARAAFESGAVDAWVIWDPFLASAQRQLGARVVADGTGVVNNLQFYLASRPYADRNPQVVAAIVDELARLDRWSQSNLPAVVSVLAPQIGLDAATTELAASRFAYGIQPITPAVAAQQQQIADTFHQLKLIPHVLVHPHAWGLPLPRYLQGRPGGRLQLLPPGGDCRGHARLRRCAAAHRPQLRGQLDRRGQPDRGDSAPEVPGRAAAGAGAASAVRPHGGDAGSPVGRTPAGQPASHDGEAVDFDGDLLQVKGGKLLYPPVNRPYPPVFFGGSSEPAHELAASQVDTYLTWGEPPEAVAQKLADVKARAAAKGRTLQYGIRLHVIVRETEDEAWRAAAELVQHLDEDVVAAAQAKFASMDSVGQRRMAELHKGRFNKANIREGLEIAPNLWAGVGLRLSASGRSLSLCRAGVPAAAAGGAREADRTGTDRAVWRDRRQQLCAGRAASGRGELNHGRGTQGRPGAAAVAGAAADPGGVAAQRAVGLALHPRAAGAIGGGTGGLGALGQRRAVATPGCEHPAGAAGLCHRRWTRAGAGTHHRVLALGRDGAGHHAADAAECARAGADSADRRGAGGHPDLCAAGQRGRHPGACAGADLAAVASGVSSMMTMTDLDVLTESGWAELQDGPGRQATARSADAAAASAAAAATARGATAVHGALQRVAPASAAPIRLQGVAKTFGDRPVLSHLDLEIRPGEFVAVVGRSGCGKSTLLRLLAGLEAPSAGMLQVGPPESVRFMFQDARLLPWARVLDNVALGLKGPEARERAAAALAQVGLSDRGQEWPAKLSGGQRQRVALARALVHAPQLLLLDEPLGALDALTRIEMQRLIERLWLRQGLTAVLVTHDVAEAVALADRVLLIEQGQVALDLRIDLPRPRLRDAAFASLEQQLLDRVLRVGEAETV 1282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco1000118g0017 1282 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1050 1246 IPR027417 -
Acco1000118g0017 1282 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1050 1266 IPR003439 GO:0005524
Acco1000118g0017 1282 SMART AABind_6 240 460 IPR001638 -
Acco1000118g0017 1282 MobiDBLite consensus disorder prediction 823 843 - -
Acco1000118g0017 1282 NCBIfam aliphatic sulfonate ABC transporter substrate-binding protein 241 512 IPR010067 GO:0016020|GO:0042626
Acco1000118g0017 1282 ProSitePatterns ABC transporters family signature. 1166 1180 IPR017871 GO:0005524|GO:0016887
Acco1000118g0017 1282 Gene3D - 1042 1251 IPR027417 -
Acco1000118g0017 1282 Gene3D - 321 420 - -
Acco1000118g0017 1282 Gene3D - 1 67 IPR029039 -
Acco1000118g0017 1282 Gene3D - 243 512 - -
Acco1000118g0017 1282 Pfam ABC transporter 1065 1193 IPR003439 GO:0005524
Acco1000118g0017 1282 PANTHER TAURINE IMPORT ATP-BINDING PROTEIN-RELATED 1048 1274 - -
Acco1000118g0017 1282 SMART AAA_5 1074 1256 IPR003593 GO:0016887
Acco1000118g0017 1282 Pfam Luciferase-like monooxygenase 619 809 IPR011251 GO:0016705
Acco1000118g0017 1282 SUPERFAMILY Periplasmic binding protein-like II 238 474 - -
Acco1000118g0017 1282 Gene3D - 582 820 IPR036661 GO:0016705
Acco1000118g0017 1282 MobiDBLite consensus disorder prediction 556 621 - -
Acco1000118g0017 1282 FunFam Sulfonate ABC transporter substrate-binding protein 321 420 - -
Acco1000118g0017 1282 Pfam NMT1-like family 235 455 - -
Acco1000118g0017 1282 SUPERFAMILY Bacterial luciferase-like 617 783 IPR036661 GO:0016705
Acco1000118g0017 1282 CDD PBP2_SsuA 240 512 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco1000118g0017 1050 1245 Calmodulin-binding Proteins AT2G36910 29.224 1.35e-14 77.4