Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco1000086g0001 ATGAATTCAGATCGAAGCCTTTTGCTTCTTTTCGCTGCGTTCGGTTCCATTATTCTCCTTCTTATCAATTGCTTCCCAGGGGCTTCAGCGGATAACAGTAATAATGGAATCAATATTTATGTTGGTGCAATTATTGATTTCAATTCTCAAGTTGGAAAACAACAGAAAGAAGCCATGGAAATTGCAGCTCGAAGCTTTAACAACCATTCAAACAACCTCAACGTATCCCTGCATTTCCGTGACTCTCTAAGGAATCCATTACAGGCAGCTTCTGCTGCTGAACAACTAATAAATGAAACAAAAATTAAAGCTATCATTGGAATGGAGACATGGGAGGAAGCAGCTTTTGTAGCTGAACTTGGAGATAAAGCTCAAGTTCCTGTGATTTCATTCTCATCTCCTTCAATATCCTCACCACCTTCATCAATCCCATTTCGTTGGCCTTTCTTGATTCAAATGGCCAAGAATCAGACAGCTAATATAAATTGCATAGCTGATATTGTTCATGCATATGGCTGGCAAAAAGTTATAGCCATATATGAAGATGATTCTTATAGTACTGATTCTTCAGGAATGTTAACCCTCCTTTCTGAAGCCCTCTTGAAGACTAATTCTCAAATTGAGCGTAGACTTGTCCTCCCGCCATTTTCTTCTTTATCTGATCCAAAAGGATTTGTTCTTGATGAACTTATTGAGCTATTATTATCAGCAAAATCTAGGGTTTTCATTGTTCTCAAAGCATCATTACCTATGGTTACTCATTTGTTTAGAGAAGCTAAGAAACTAGGGTTCTTAGGGAAAAACTCAGTTTGGATTGTTAATGAAGATATTGCTGGCATGTTGGACTCAGTCAATGATACTGTCTTGTCCTCCATGGAAGGTATTATTGGAATCAAAAGCTATTATTCTACTAATTCAAGTGACTATACTCAGTTCATAGAAAAATTGCAAAACCAGTCTCATCCACCAGCAGCATTCTATGCACTGCAAGCTTATGATAGCATCACGATGGTCGCTAAAGCCCTACAGAAGACGAATGGTACTAATAACTCGAGATTGTTGTTGAAGACAATGCTGTCTAGTAACTTCACTGGTTTAACTGGTGACATAAGGTTCAAGGAAGGCCATTTATCACAGACTTCATTGTTAAGAGTGATAAATGTGGTTAACAAGAAATACACAGAATTGGATTTTTGGGTACCAAATTTGAAGTTCTTTAAATCTCTGCAAGACATAGAGAAAGGAAGTGATGTTGCTAGAAATAATCTTAATGGTCCAGTGGTTTGGCCTGGAGGTCTAAAGACTCTAAACAATAATGATAATGTTCCATTAGGATGGAACATACCTTCAGAAAAAAATCCTTTAAAAGTAAGAGTTCCTTTAAAGTCTGCTTTCGAGAATTTTGTGAAGGAAGAATCTCAAGGCAAATATGTTGGCCTGTGTATTGAAATTTTTGAAAACATTCAAGAACAGCTCAAAGATAAATACTCTGGTTTGCCATATGAATATCATCCCTTCGATGGTGTATCTTATGATGAGGTTCTACAAAATTTCGCCGACCTGGAGTATGATGCTATTGTTGGAGATGTAACAATACTTGAGGCTCGATCAAAGAATGTGTCGTTCACACAACCATATTCAGAGTCAGGTTTATCACTCATACTTCCAGCTGAGAGAGAAGGCACGACATTTCTGTTCGTGAAGCCATTTAGTTGGCAAATGTGGCTAGCCACTGGTGCCATCTTCTTCTACACAACGCTTGCTATCTGGTTTCTTGAGCATCCATTAAACCCTAGCTTTAAAGGATCATGGAAAAATCAACTCAGCAACACTTCTTGGTTCGCCTTTTCTTCCCTATTCTTCGCTCACGGGGGTAAAGTGTACAGTAACTCAGCGAGAGTGGTGGTTGCTGTATGGCTATTTCTGGTATTCGTTTTGACTTCAAGCTACACTGCAAGTTTGTCTTCTATGCTCACTGTGAAACGCATGAATACTGGGAGAGACGTTGAGTGGCTGAAAGAAAATAAGTTAACAGTTGGCTGTGATAATAGCAGTCAATTTGTGAAGAACTACTTGCTCAATGTCTATAACATATCTGAAGAGCAGATCTTAAGTCTTGAAGGTGAACCTGACTTTGTGGACGGCTTTAAGAGCAAACGAATTTCTGCTCTCTTCCTTGAGAGCCCTTATGAAAAGGTTTTCTTAAACAAGTATTGCAATCAATATACTGCAACTCCTGCTGGCTATAAATTTGGAGGCCTAGGCTTTGTATTCCAAAGAGACTCTCCGTTGGTGAAAGACTTTTCTGAAGGCATTTTAAGGTTAGCAGAGAATGGAACTCTAAAACTTTTGGAAGAGAAATGGTTGACCCCTTCCAATAACTGCTCAAGTGACTCAACGTCCTCGTCTTCTGAAACCGAAAGCCTATCCATCGCCGACTTTTGGATTCTCTATGTGATTAGTGGTCTCACTTCCACCATCTTCTTGATCATTGCTCTGTTTAGAACTTATCTTCATCAACAGAAAGAATGTGAAGACAATAATAATATAGAAGCTTCCGATGATAATAATAATAATGGTGTTTGGAACAAGTCACTCGGGAGACTCGCTTCAGGGCTTTACAACAATATTGCCAGTTTCAATTTCAACACTATAGGAAGAGCTGCAACTTTTGGTGGAACAGAAACTGTTCGCCATTGGAATTCTTCGAGGTGGGAAAATGTAAGAACATCTGATGATCATTTTAATCCTCGACGGACCCAATCGGTTGGCTTAGAAATGTTGTAG 2787 0.3886 MNSDRSLLLLFAAFGSIILLLINCFPGASADNSNNGINIYVGAIIDFNSQVGKQQKEAMEIAARSFNNHSNNLNVSLHFRDSLRNPLQAASAAEQLINETKIKAIIGMETWEEAAFVAELGDKAQVPVISFSSPSISSPPSSIPFRWPFLIQMAKNQTANINCIADIVHAYGWQKVIAIYEDDSYSTDSSGMLTLLSEALLKTNSQIERRLVLPPFSSLSDPKGFVLDELIELLLSAKSRVFIVLKASLPMVTHLFREAKKLGFLGKNSVWIVNEDIAGMLDSVNDTVLSSMEGIIGIKSYYSTNSSDYTQFIEKLQNQSHPPAAFYALQAYDSITMVAKALQKTNGTNNSRLLLKTMLSSNFTGLTGDIRFKEGHLSQTSLLRVINVVNKKYTELDFWVPNLKFFKSLQDIEKGSDVARNNLNGPVVWPGGLKTLNNNDNVPLGWNIPSEKNPLKVRVPLKSAFENFVKEESQGKYVGLCIEIFENIQEQLKDKYSGLPYEYHPFDGVSYDEVLQNFADLEYDAIVGDVTILEARSKNVSFTQPYSESGLSLILPAEREGTTFLFVKPFSWQMWLATGAIFFYTTLAIWFLEHPLNPSFKGSWKNQLSNTSWFAFSSLFFAHGGKVYSNSARVVVAVWLFLVFVLTSSYTASLSSMLTVKRMNTGRDVEWLKENKLTVGCDNSSQFVKNYLLNVYNISEEQILSLEGEPDFVDGFKSKRISALFLESPYEKVFLNKYCNQYTATPAGYKFGGLGFVFQRDSPLVKDFSEGILRLAENGTLKLLEEKWLTPSNNCSSDSTSSSSETESLSIADFWILYVISGLTSTIFLIIALFRTYLHQQKECEDNNNIEASDDNNNNGVWNKSLGRLASGLYNNIASFNFNTIGRAATFGGTETVRHWNSSRWENVRTSDDHFNPRRTQSVGLEML 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco1000086g0001 928 Gene3D - 42 381 - -
Acco1000086g0001 928 Pfam Receptor family ligand binding region 55 387 IPR001828 -
Acco1000086g0001 928 Gene3D - 156 399 - -
Acco1000086g0001 928 FunFam Glutamate receptor 563 693 - -
Acco1000086g0001 928 Pfam Ligand-gated ion channel 791 822 IPR001320 GO:0015276|GO:0016020
Acco1000086g0001 928 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 41 851 IPR015683 -
Acco1000086g0001 928 PIRSF IGluLR_plant 9 871 IPR017103 -
Acco1000086g0001 928 Gene3D - 450 562 - -
Acco1000086g0001 928 SUPERFAMILY Periplasmic binding protein-like I 39 431 IPR028082 -
Acco1000086g0001 928 SMART GluR_14 456 791 IPR001320 GO:0015276|GO:0016020
Acco1000086g0001 928 SUPERFAMILY Periplasmic binding protein-like II 445 790 - -
Acco1000086g0001 928 Gene3D - 737 797 - -
Acco1000086g0001 928 FunFam Glutamate receptor 160 324 - -
Acco1000086g0001 928 Gene3D - 563 700 - -
Acco1000086g0001 928 Pfam Bacterial extracellular solute-binding proteins, family 3 467 790 IPR001638 -
Acco1000086g0001 928 CDD PBP1_GABAb_receptor_plant 41 409 IPR044440 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco1000086g0001 3 849 Ion Channels AT2G29120 31.313 7.53e-122 391