Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco1000082g0011 ATGTGCCGCTCGTTATCGCTGCTGCTCGCGACATCCGGGGTGCCGGCACGATCGTTCGGCAGCGCCGACCTGTTTCTGGATACACTGGATTCCCTGCCGATCGGCGTCATCATCTGCGACGTCATCATGCCCGGGTCGTCCGGCCTCGCGCTGGTCCGTGCGCTGCCGCCGCTCGACCGGCCGGACCCCGTCATCGTCATTGCGGGCCATGCCGATATCCCGCTCGCCGTCGACGCGCTGAAGGCCGGTGCGTTCGATTTCATCGAAAAGCCGTTCGAGGCGTCGGTGATCGGCAAAGCGGTGGCGGGCGCCAAATCCCTGCTCCGAGACCGGATGGCCGCCCGGCAACGGCTGGACGCCTTGTCACCACGCGAACGGCAGGTGCTGCATCTGATCAGCCAGGGTGCGACGAGCAAGGAGGCGGCGCGCGCCCTCGGCATCAGTCCGCGGACGGTCGAAACCTACCGCGTGCATCTGCTCGAAAAGACGGGCGCGGGCAGCACAGCCGAACTCATCCGCCTCGGCGTCGAACTCGATCGGCTGGGCGTGGGGTCACTCGCGCCACTCGTCGCGCATCAGCTTGATGCTCAGGCTGTACACTAG 603 0.6683 MCRSLSLLLATSGVPARSFGSADLFLDTLDSLPIGVIICDVIMPGSSGLALVRALPPLDRPDPVIVIAGHADIPLAVDALKAGAFDFIEKPFEASVIGKAVAGAKSLLRDRMAARQRLDALSPRERQVLHLISQGATSKEAARALGISPRTVETYRVHLLEKTGAGSTAELIRLGVELDRLGVGSLAPLVAHQLDAQAVH 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco1000082g0011 200 CDD LuxR_C_like 121 177 IPR000792 GO:0006355
Acco1000082g0011 200 ProSiteProfiles LuxR-type HTH domain profile. 114 179 IPR000792 GO:0006355
Acco1000082g0011 200 Pfam Response regulator receiver domain 3 101 IPR001789 GO:0000160
Acco1000082g0011 200 SUPERFAMILY C-terminal effector domain of the bipartite response regulators 119 179 IPR016032 GO:0003677|GO:0006355
Acco1000082g0011 200 PRINTS LuxR bacterial regulatory protein HTH signature 135 151 IPR000792 GO:0006355
Acco1000082g0011 200 PRINTS LuxR bacterial regulatory protein HTH signature 151 163 IPR000792 GO:0006355
Acco1000082g0011 200 PRINTS LuxR bacterial regulatory protein HTH signature 121 135 IPR000792 GO:0006355
Acco1000082g0011 200 Pfam Bacterial regulatory proteins, luxR family 120 174 IPR000792 GO:0006355
Acco1000082g0011 200 SUPERFAMILY CheY-like 2 139 IPR011006 -
Acco1000082g0011 200 ProSiteProfiles Response regulatory domain profile. 1 105 IPR001789 GO:0000160
Acco1000082g0011 200 Gene3D - 1 111 - -
Acco1000082g0011 200 Gene3D - 112 176 IPR036388 -
Acco1000082g0011 200 SMART luxrmega5 118 175 IPR000792 GO:0006355
Acco1000082g0011 200 SMART REC_2 1 101 IPR001789 GO:0000160
Acco1000082g0011 200 PANTHER - 21 178 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco1000082g0011 Response_reg 3.8e-16 CL0304