Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco1000039g0008 ATGAAGAGGGTTGGAGTGCATCTCAAAAGAAGTGCACGAAAATTGATGAGAGTGAACAGAAGTTACAAAAACTGGAAAATTTACACCTCAGAAATACAGAGGGATCAAGGTCATACATCAACCTCTTCTGCTTCAACTTCTAGTCCGTCACTGTCATCAGAATCTAAAGAGAGTGAAGGTGAAGATAGGGCTGTGTCCACATCAGAGGATACAATTTATGGGGAGAAAGTTGAGCCAGCTGTTGACTTGATGAAAACAATGCTTTGGGCTTCATATTCAGAACCAAAGAAAGTCAAATCTACAATGGAAGAGAAAAACGTAGAATTTAAGGTGTCCAATAATAGAAAGGCAGCTAAAATTGATGTTACGAATGGGACTGGAGGTGGGATGAGATCGGATTTGGAATCCGAAAGGCAATTGATGGGTTCGTTTTCAAATGGCAATGGTGATTTCGAGGTTAGGAGGAAGGGTGGACCTAGATTCAAAGATTTGGGTGGGATGAAGAAGGTACTGGAGGAATTGAAGATGGAAGTAGTTGTGCCACTTTATCATCCACAGTTGCTAAGAAGGTTAGGTGTGAGGCCAATAGCTGGAATTTTGTTGCATGGACCACCGGGATGTGGGAAAACTACACTGGCTCATGCTATAGCTAATGAGACTGGTTTCCCATTCTATCAGATATCAGCTACAGAGGTAGTTTTTGGAGTTTCTGGAGCATCAGAAGAAAATATTAGAGAGCTTTTCTCTAAAGCATACAGGACTGCCCCATCAATTGTCTTTATTGATGAGATTGATGCAATAGCTTCAAAAAGAGAGAATTTACGGCCTGATGCTGTGGACCCTACCCTAAGAAGGCATGGGCGGTTTGATCGTGAAATTGTTCTTGGTTTTCCTGATGAATGTGGCAGGGAGGAGATCCTGTCTGTGCTTACTCACAATCTAAAGCTTGAGGGCTCCTTTGATCTTAGGAAAATAGCGAGGTCTACACCAGGTTTTGTTGGAGCAGATTTGGCAGCTCTAATTAACGAGGCAGGAAACCTATCAATGAGAAGAATTATTGTTGAAAGGAAATGTGAGTTATCCCAAGATCTTTTAGATGAGTGGTGGAGGCAACCTTGGTCAGCTGAAGAGATGGATGAGCTTGTCATCGAAATGTCTGATTTTGAGGAAGCAGTTAAATTGGTGCAACCTTCATCAAGAAGAGAAGGATTTTCTTCCATTCCTAATAGAATTGGAGAGATGAAGAACGGAATCAAACTGAAAGAGGAAAATGAGGAATTTGGGGTGAATCTTGAGACAGGATTTTTGCTTTATGGACCACCAGGGTGTGGTAAAACGCTGATAGCCAAAGCTGTTGCCTATGAAGCAGGGGCTAATTTTATTCATATCAAGGGCCTTGAACTCTTAAATAAATACGTTGGAGAAAGTGAGCTAGCAGTAAGAACATTGTTTAGTCGTGCAAGGATTTGTTCACCTTGCATTCTTTTCTTTGATGAGGTGGATGCTTTGACAACCAAAAGAGGTAAAGAAGGTGGATGGGTTGTTGAACGACTATTTAACCAGTTGCTCATTGAATTAGACGATGCCAAGCAAAGGCAAGGTGTTTTTGTTATTGGTGCTACAAACAGACCTGAGAAGCCAATTGATGACACTGTGGATTTGTGTGCCATTGGAAGAATGGAAGCCTGTGAAAACCTCAGCGGTGCCGACCTTGCTGCATTGGTGAATGAAGCGGCAGTGGCTGCAGCGGAAGAGAAATGGACATCAACAGAGAGCACTTGCAATGCATCGACTATCAAGTTCAGCCATTTTGATATGGCATTGAGAAAAATCTCTCCATCCGTGTCTGACATGGGTGCCACACAAAATTTAAGTGAAATAGATAGAGGAGAGGCTTTACTCAAGGCCAAGACAGAACCTGTCTTGTGCATTGCCAACTAA 1941 0.4225 MKRVGVHLKRSARKLMRVNRSYKNWKIYTSEIQRDQGHTSTSSASTSSPSLSSESKESEGEDRAVSTSEDTIYGEKVEPAVDLMKTMLWASYSEPKKVKSTMEEKNVEFKVSNNRKAAKIDVTNGTGGGMRSDLESERQLMGSFSNGNGDFEVRRKGGPRFKDLGGMKKVLEELKMEVVVPLYHPQLLRRLGVRPIAGILLHGPPGCGKTTLAHAIANETGFPFYQISATEVVFGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIASKRENLRPDAVDPTLRRHGRFDREIVLGFPDECGREEILSVLTHNLKLEGSFDLRKIARSTPGFVGADLAALINEAGNLSMRRIIVERKCELSQDLLDEWWRQPWSAEEMDELVIEMSDFEEAVKLVQPSSRREGFSSIPNRIGEMKNGIKLKEENEEFGVNLETGFLLYGPPGCGKTLIAKAVAYEAGANFIHIKGLELLNKYVGESELAVRTLFSRARICSPCILFFDEVDALTTKRGKEGGWVVERLFNQLLIELDDAKQRQGVFVIGATNRPEKPIDDTVDLCAIGRMEACENLSGADLAALVNEAAVAAAEEKWTSTESTCNASTIKFSHFDMALRKISPSVSDMGATQNLSEIDRGEALLKAKTEPVLCIAN 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco1000039g0008 646 MobiDBLite consensus disorder prediction 33 54 - -
Acco1000039g0008 646 Gene3D - 298 397 - -
Acco1000039g0008 646 PANTHER AAA-FAMILY ATPASE 59 550 - -
Acco1000039g0008 646 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 403 IPR027417 -
Acco1000039g0008 646 Pfam AAA+ lid domain 552 587 IPR041569 -
Acco1000039g0008 646 Pfam AAA+ lid domain 320 390 IPR041569 -
Acco1000039g0008 646 FunFam Cell division control protein 48 homolog C 298 402 - -
Acco1000039g0008 646 Gene3D - 152 296 IPR027417 -
Acco1000039g0008 646 MobiDBLite consensus disorder prediction 55 69 - -
Acco1000039g0008 646 Gene3D - 398 561 IPR027417 -
Acco1000039g0008 646 MobiDBLite consensus disorder prediction 33 72 - -
Acco1000039g0008 646 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 418 616 IPR027417 -
Acco1000039g0008 646 Pfam ATPase family associated with various cellular activities (AAA) 199 271 IPR003959 GO:0005524|GO:0016887
Acco1000039g0008 646 Pfam ATPase family associated with various cellular activities (AAA) 436 551 IPR003959 GO:0005524|GO:0016887
Acco1000039g0008 646 SMART AAA_5 195 299 IPR003593 GO:0016887
Acco1000039g0008 646 SMART AAA_5 431 567 IPR003593 GO:0016887
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco1000039g0008 381 614 Calmodulin-binding Proteins AT3G56690 36.491 4.71e-41 159