Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco1000039g0007 ATGAAAGAGAGCTCGGAGCAGCATCTTGTGATCAAAACACACTTGCAGAACTCCATAAATCCGGCGAAGAAAGCAACCAAAACGGTCCAAAATGGCAAAGGTCCACCACCACCACCACCACCTCAAGAGCCTCACAACGCCAAACCCCATAATAGCCAGAGCCAACCTCCGCCTGTGGCTAAGAACCGAGGAAGAAGAAGGAGCCGGGGAGGCCGAAAGTCCGATCAAGGCGATGTTCCGATGCGACCTGCTTGTCGACCCTGCACTGTGGCTAATAAACCGCTATCAGAAAACACGGGTCAGATTCTGGTATCAAGTACTGCAAATGGGCCTGTCGTTGAAAATGGCGGCAACGGCAACTCTTGTGATGTTGTGATGGGGTTTCCGACCTCAAGTAAATCTTTGAGCTTCGCTCCTAGGCCCGGATACGGACAAGTTGGGACAAAATGCATAGTGAAGGCTAACCATTTCTTTGCAGAGTTGCCGGACAAGGACTTGAACCAGTATGATGTCACTATTACCCCAGAAGTGTCGTCTAGAACAGTAAACAGGGCCATCATGGCGGAACTCGTGAGACTGTACAAAGATTCTGACTTGGGGATGAGGCTCCCTGCATATGATGGCAGAAAAGGTCTGTACACAGCAGGAGAGCTTCCCTTTGCTTGGAGGGAGTTTAAAATTAAGCTTGTAGATGAAGACGATGGAGTTAATGGTCCCAAAAGGGAAAGAGAATACAAAGTGGTGATTAAGTTTGTTGCTCGGGCAAACTTGCATCACTTGGGCCAGTTTTTAGCTGGTAAGCGTGCTGATGCTCCACAGGAGGCACTTCAGATTCTTGACATTGTACTAAGAGAGCTATCAACCAAGAGGTTTTGCCCCATTGGGAGATCCTTCTTTTCACCCGATATTAGAACTCCTCAAAGGCTTGGAGAGGGATTGGAATCTTGGTGTGGATTTTACCAGAGCATAAGGCCTACTCAGATGGGTCTTTCCCTCAATATTGATATGGCCTCAGCTGCATTTATTGAGCCTCTTCCTGTGGTGGAATTTGTTGGTCAGCTGTTGGGAAAAGATGTGTTGTCAAGGCCATTGTCAGATGCTGATCGTGTAAAGATTAAGAAAGCCCTTAGAGGAGTTAAAGTTGAAGTAACACACAGAGGGAGTGTACGAAGGAAATATCGTGTTTCAGGGTTGACTTCTCAACCAACAAGAGAACTTGTGTTTCCTGTTGATGACAACTCAACTATGAAATCTGTAGTTGAGTACTTCCAAGAGATGTATGGTTTCACTATTCAATATACTCACCTACCTTGTCTTCAAGTAGGAAACCAAAAGAAGGCGAACTATTTACCTATGGAGGCATGCAAAATTGTTGAGGGGCAACGGTATACAAAAAGGTTGAACGAGAAGCAAATTACTGCTTTGCTGAAAGTCACTTGTCAGAGACCCCGTGATCGGGAAAACGACATTTTGCGGACCATCCAACATAATGCTTATGATCAAGATCCTTATGCAAAGGAGTTTGGGATTAAGATCAGTGAAAAATTAGCTTCTGTTGAAGCACGAATTCTTCCGGCCCCATGGTTGAAATATCATGACACTGGGAAAGAAAAGAACTGTTTACCCCAAGTTGGTCAGTGGAATATGATGAACAAGAAAATGATCAATGGGATGACTGTTAGCCGATGGGCATGCATAAATTTTTCACGAAATGTGCAAGATAGTGTTGCTCGCAGTTTTTGTAGTGAACTTGCTCAGATGTGTGAAGTATCGGGCATGGAATTTAATCCAGAGCCTGTTATCCCAATATATAATGCCAAGCCTGAGCAGGTGGAGAAAGCTCTTAAGCACGTTTATCATGTTTCGATGAATAAAACCAAGGGAAAGGAGTTAGAGCTTCTATTAGCAATATTGCCTGACAACAATGGCTCTCTTTATGGTGATCTCAAGCGAATTTGTGAAACTGATCTTGGTTTAATTTCTCAATGCTGCCTGACGAAGCACGTCTTTAAGATCACTAAACAGTATCTGGCTAATGTGTCTCTGAAGATTAATGTTAAGATGGGAGGTAGAAACACTGTTCTTCTTGACGCTATAAGCTGCAGAATACCATTGGTTAGTGACATTCCAACCATAATATTTGGAGCAGATGTTACCCACCCTGAAAATGGAGAAGATTCCAGTCCCTCAATAGCAGCTGTAGTAGCTTCCCAAGACTGGCCTGAAGTGACTAAATATGCTGGTTTAGTGTGTGCTCAAGCTCACAGACAAGAACTCATTCAAGATTTGTACAAAACTTGGCATGATCCTGTCCGTGGCACGGTTAGCGGTGGCATGATCCGAGACTTGTTGATCTCCTTTAGAAAGGCAACAGGACAGAAGCCACTAAGGATTATATTTTACAGGGATGGTGTAAGTGAAGGGCAATTTTATCAAGTTCTACTTTATGAGTTAGATGCAATCCGGAAGGCTTGTGCTTCCTTGGAGCCAAACTATCAGCCTCCAGTAACTTTTATTGTGGTACAAAAAAGACATCACACTAGGTTGTTTGCAAACAACCACAGAGATAAGAGCAGTACAGATAGAAGTGGGAATATATTGCCAGGAACCGTTGTTGATTCTAAAATCTGTCATCCAACAGAATTTGATTTTTATCTTTGCAGTCATGCTGGTATTCAGGGGACTAGTCGGCCAGCTCATTATCACGTCCTGTGGGATGAAAACAACTTTACAGCAGATGGAATTCAGTCTTTGACAAACAATCTCTGTTATACATATGCTAGGTGTACACGTTCTGTATCTGTTGTTCCTCCGGCGTACTATGCTCATCTAGCAGCATTTCGTGCCCGGTTTTACATGGAGCCAGACATGCAAGAGAATGGCTCTACCGGCGGGGGTAGCATGGGTCATGGTTCCAAAGCATTGCGAGCAGCTGGAGAATGTGGGGTCCGGCCGTTGCCAGCCTTGAAAGAAAATGTGAAGAAGGTAATGTTCTATTGTTAG 3003 0.4422 MKESSEQHLVIKTHLQNSINPAKKATKTVQNGKGPPPPPPPQEPHNAKPHNSQSQPPPVAKNRGRRRSRGGRKSDQGDVPMRPACRPCTVANKPLSENTGQILVSSTANGPVVENGGNGNSCDVVMGFPTSSKSLSFAPRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVSSRTVNRAIMAELVRLYKDSDLGMRLPAYDGRKGLYTAGELPFAWREFKIKLVDEDDGVNGPKREREYKVVIKFVARANLHHLGQFLAGKRADAPQEALQILDIVLRELSTKRFCPIGRSFFSPDIRTPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVEFVGQLLGKDVLSRPLSDADRVKIKKALRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDDNSTMKSVVEYFQEMYGFTIQYTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILRTIQHNAYDQDPYAKEFGIKISEKLASVEARILPAPWLKYHDTGKEKNCLPQVGQWNMMNKKMINGMTVSRWACINFSRNVQDSVARSFCSELAQMCEVSGMEFNPEPVIPIYNAKPEQVEKALKHVYHVSMNKTKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGTVSGGMIRDLLISFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDKSSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMQENGSTGGGSMGHGSKALRAAGECGVRPLPALKENVKKVMFYC 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco1000039g0007 1000 MobiDBLite consensus disorder prediction 10 27 - -
Acco1000039g0007 1000 SUPERFAMILY Ribonuclease H-like 623 955 IPR012337 -
Acco1000039g0007 1000 ProSiteProfiles Piwi domain profile. 633 954 IPR003165 GO:0003676
Acco1000039g0007 1000 Gene3D paz domain 338 463 - -
Acco1000039g0007 1000 Pfam Argonaute linker 2 domain 485 531 IPR032472 -
Acco1000039g0007 1000 MobiDBLite consensus disorder prediction 1 93 - -
Acco1000039g0007 1000 Pfam PAZ domain 371 475 IPR003100 GO:0005515
Acco1000039g0007 1000 FunFam protein argonaute 10-like 702 1000 - -
Acco1000039g0007 1000 Pfam N-terminal domain of argonaute 149 283 IPR032474 -
Acco1000039g0007 1000 SMART PAZ_2_a_3 349 481 IPR003100 GO:0005515
Acco1000039g0007 1000 Gene3D - 523 696 - -
Acco1000039g0007 1000 MobiDBLite consensus disorder prediction 32 46 - -
Acco1000039g0007 1000 Pfam Mid domain of argonaute 542 619 IPR032473 -
Acco1000039g0007 1000 SMART DUF1785_2 292 344 IPR014811 -
Acco1000039g0007 1000 CDD Piwi_ago-like 503 953 IPR045246 -
Acco1000039g0007 1000 FunFam Protein argonaute-2 338 464 - -
Acco1000039g0007 1000 Pfam Piwi domain 634 953 IPR003165 GO:0003676
Acco1000039g0007 1000 SUPERFAMILY PAZ domain 339 499 IPR036085 GO:0005515
Acco1000039g0007 1000 SMART Piwi_a_2 633 954 IPR003165 GO:0003676
Acco1000039g0007 1000 FunFam Argonaute 10 523 696 - -
Acco1000039g0007 1000 CDD PAZ_argonaute_like 344 458 - -
Acco1000039g0007 1000 Gene3D - 702 1000 IPR036397 GO:0003676
Acco1000039g0007 1000 ProSiteProfiles PAZ domain profile. 345 459 IPR003100 GO:0005515
Acco1000039g0007 1000 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 129 955 - -
Acco1000039g0007 1000 Pfam Argonaute linker 1 domain 293 342 IPR014811 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco1000039g0007 1 1000 Eukaryotic Initiation Factors Gene Family AT5G43810 82.090 0.0 1666