Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco1000039g0006 ATGAAACTTCTTCAGTCCGAGGAAACTGCCTCTGAGGCTTGCGACTTTCCTGAGGAAACCCCAGAAGAGAAACCCCCGAGTTCTTCTGTGGTTGAAGGCAATGACCGTTGCCTTGATAATGGTGATGCGGTTCTCGATGTCTTCGGCAAAACCGTGGAGTTCCCGGTATTGGAGAACGCAGAAGACTCCGTGGAGGCCTTGTATTTTTATAAGAATGTTTTCAATTTGATTCCCAAGTCTCTGGGAGGTCATGGGCGCTTGAAGACATTAAAGTTCTTCGGGAATGAGATTAATTTATTTGCCCCGGAGTTTGAAAACTTGACGGGCTTGGAGTGCTTGCAAATGAAGATATCTTCTCCTGGGATTGGTGGGTTGCCATTGCATAAGTTGAAGGGTTTGAAGGAGTTAGAGTTGTCCAAAGTGCCTCCGCGACCTTCTGCTTTCCCTATATTGACCGAGATTGCTGGTCTCAAGTCCTTGACCAAGCTATCTGTTTGCCACTTTTCTATAAGATACCTTCCTCCTGAAATTGGTCTCTTAAAGAAACTAGAGTATCTTGATCTTTCATTCAATAAGATGAAGACACTGCCCTCCGAAATCAGTTATTTGAATGGCTTGATATCTTTGAAAGTTTCCAATAATAAGTTGGTGGAACTTCCATCAACTATGGCCTCTCTGTCCGGGCTGGAGAACCTGGACCTTTCAAATAATATGTTGACTTCATTGGGGCCTCTTGAACTTGGATCTATGCATAAACTGCAGAATTTAAATCTTCAGTTCAATAAGCTGCGGAACATACTTCAAATACCTTCATGGATTTGCTGTAACATGGAAGGAAATGACAAGGGTGACTGCAGTGATGATTTTAGCAGTTCTTCTGTTGAAATGGATGTCTATGAAACTAGTTCACTGGAGAATTATGGACTACTTCCAGAAGCATCTCGTAATACCTCATCAAACCTATTAACTATCGCCTCATCTAGCAGTAGATGTTTTGCAACCCAGAAGTCAGGTAAAAGATGGAAGCGGCGGCACTACTTACAGCAGAAAGCCCGTCAAGAGTGTTTAAACAACAGCAGGAAGTGGAAAGGTTTAAATAATTCACAACTGAGCAATGAGATGCATAAAATTTGTGAATCAGAAAACCAAGGCAGTCTTGCTCCTGAAAACTGCAGTGAAGCTCGTCCTTTGGACTGTGTGGGTCTGTACGATGAAGCTAAAAAGATGGTGTCAGAGGAAGCTGAAGATGACAGTGTAATTGATGATGTTAACAATGATGAAGTGGGTGTTGAAAGGCAGTTTTCTAAGGATTGCTGTTCTGGTGAAAGGGAAGATGAAAAAGATGCTTCCTTATGCCACTTGGAGAATGGACCTAGTGGGCAGGACGATGCATCAAGTTCAGAATCTTTGAAGCATATTTCCAAATCAAAAAGGTATTCAGATAGGGATCTTGATAATCCTAAACCATGCAAGTCTAGGAAACCAATTGGTGATAGCACATCATTGTCCTACAAGTACAGTAGATTATCATTTTGTGGCATTGAAGACCATCTACCAGATGGCTTTTATGATGCTGGACGTGATCGACCTTTTATGCCCCTTGAGAGTTATGAGCAAAATCAGGGTTTTGCCTCTCGTGAAGTCATCTTATTGGACAGAGAAAGGGATGAAGAACTGGATGCAATTACACTATCTGCTCAGTCGTTGGTGTTTCATTTGAAGCATTTAAATGATTTTAACAAACATGGGAATCAAGCTGCTCCTGATAGCTTCCAGGTTGCTTCACTGCTTGCACTCTTTGTATCAGATCATTTTGGGGGCAGTGATAGAGGTGCTATTGTAGAAAGGACACGAAAATTGGTGTCTGGTTCAAATTATCACAAGCCTTTTGTCTGTACATGCTCAACTGGAAGCAACAGTGATATTAGTGCTTCCTCTATACCAGTTGTAAACAGTGTAGAAGACATTACTCTTACTAATATCTGTGAAAAATCTCTTGGGTCTATCAAAAGAAGACGAAGTTCGGTCATAGTTCCCATTGGATCTGTGCAGTTTGGTGTGTGTAGACATAGAGCTCTACTTTTGAAGTATTTATGTGATCGCATGGAGCCTCCAGTACCTTGTGAGCTTGTCAGGGGTTTCTTGGATTTTTCACCACATGCCTGGAACGTCATCGTAGTTAATAGAGGTGATACCCAGGTTAGAATGTTGGTTGATGCATGCCGGCCGCATGATATAAGAGAAGAGGAAGACCCTGAGTTCTTTTGCAGGTATATACCTCTTAATCGAACCAAAGTTCCTCTTTCTCCTGATGGAACTCCTGGACCTGGTTGTTCATTTCCATCTCTCTCTACATGTGATGAATATGAGAAAGCATCTTCAAGTACTTTAGTTCGGTGCAAACTTGGGTCAATTGAGGCTGCAGCAAAGGTGCGTACTTTGGAAGTGAAGGAGAGTTCGCCAGACAAAATAAAAAACTTTGAATATAATTGTTTGGGGGAAGTGAGAATTTTAGGTGCTCTGAAACATCCCTGTATAGTTGAAATGTATGGACACCAAATATCTTACAAGTGGACTTTTTCAGAGGATGGTGATCCTGAGCATTGTGTATTAAGGTCTGCAATTTATATGGAGTACACAGAAGGGGGCTCTTTGAGAACCTATCTTGATAAGTTATCAAAAGCTGGTGAAAAGCATGTTCCAGTAGAGCTGGCTTTTTATATTGCCAAAGATGTTGCATGTGCATTGTCAGAACTGCACTTGAAGCACATAATTCATCGCGATGTAAAAAGTGAAAACGTTCTTATTGCTTTGGATAGAAAGAAAGAGGATGGCACCCCTACTGTGAAGCTTTGTGATTTTGACAGTGCAGTGCCACTAAGATCACCTTTGCATAGCTGCTGTATTGCTCATGTGGGGACACCACCTCCTTATGTATGCACCGGAACACCACGTTGGATGGCTCCAGAGGTCATGCGGACTATGTATAAAGAAAATACTTATGGATTGGAAGTTGATATCTGGTCATTTGGATGCTTGCTTCTGGAGCTTCTCACACTTCGTATTCCATATTTTGGGCTGACAGATTTACAATTCCATGACATTTTACAGATGGGTAAACCCCCACAGTTACCCGAAGAACTGGAGACCCTGAGTGCACCAAAGGAGCCCACGTTGATTCAATCCAGTGATGAGCCGGATAAATCAGATACCAAGGCAGACATGATGAAATTCCTTGTTGACTTGTTCCATAGGTGTGTGGAAGAAAATCCAGCAAAACGGCCTACAGCGAAAGAAATCTATGAAATGCTGCTTGAACAAACTGACATTCTAAAAGTACAAGATGTTGGGAAGAGTTAG 3360 0.4196 MKLLQSEETASEACDFPEETPEEKPPSSSVVEGNDRCLDNGDAVLDVFGKTVEFPVLENAEDSVEALYFYKNVFNLIPKSLGGHGRLKTLKFFGNEINLFAPEFENLTGLECLQMKISSPGIGGLPLHKLKGLKELELSKVPPRPSAFPILTEIAGLKSLTKLSVCHFSIRYLPPEIGLLKKLEYLDLSFNKMKTLPSEISYLNGLISLKVSNNKLVELPSTMASLSGLENLDLSNNMLTSLGPLELGSMHKLQNLNLQFNKLRNILQIPSWICCNMEGNDKGDCSDDFSSSSVEMDVYETSSLENYGLLPEASRNTSSNLLTIASSSSRCFATQKSGKRWKRRHYLQQKARQECLNNSRKWKGLNNSQLSNEMHKICESENQGSLAPENCSEARPLDCVGLYDEAKKMVSEEAEDDSVIDDVNNDEVGVERQFSKDCCSGEREDEKDASLCHLENGPSGQDDASSSESLKHISKSKRYSDRDLDNPKPCKSRKPIGDSTSLSYKYSRLSFCGIEDHLPDGFYDAGRDRPFMPLESYEQNQGFASREVILLDRERDEELDAITLSAQSLVFHLKHLNDFNKHGNQAAPDSFQVASLLALFVSDHFGGSDRGAIVERTRKLVSGSNYHKPFVCTCSTGSNSDISASSIPVVNSVEDITLTNICEKSLGSIKRRRSSVIVPIGSVQFGVCRHRALLLKYLCDRMEPPVPCELVRGFLDFSPHAWNVIVVNRGDTQVRMLVDACRPHDIREEEDPEFFCRYIPLNRTKVPLSPDGTPGPGCSFPSLSTCDEYEKASSSTLVRCKLGSIEAAAKVRTLEVKESSPDKIKNFEYNCLGEVRILGALKHPCIVEMYGHQISYKWTFSEDGDPEHCVLRSAIYMEYTEGGSLRTYLDKLSKAGEKHVPVELAFYIAKDVACALSELHLKHIIHRDVKSENVLIALDRKKEDGTPTVKLCDFDSAVPLRSPLHSCCIAHVGTPPPYVCTGTPRWMAPEVMRTMYKENTYGLEVDIWSFGCLLLELLTLRIPYFGLTDLQFHDILQMGKPPQLPEELETLSAPKEPTLIQSSDEPDKSDTKADMMKFLVDLFHRCVEENPAKRPTAKEIYEMLLEQTDILKVQDVGKS 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco1000039g0006 1119 ProSiteProfiles Protein kinase domain profile. 791 1104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco1000039g0006 1119 Pfam Ethylene-responsive protein kinase Le-CTR1 659 739 - -
Acco1000039g0006 1119 SMART serkin_6 789 1111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco1000039g0006 1119 SMART LRR_typ_2 226 249 IPR003591 -
Acco1000039g0006 1119 SMART LRR_typ_2 180 203 IPR003591 -
Acco1000039g0006 1119 SMART LRR_typ_2 250 272 IPR003591 -
Acco1000039g0006 1119 SUPERFAMILY RNI-like 63 280 - -
Acco1000039g0006 1119 Gene3D Transferase(Phosphotransferase) domain 1 787 1116 - -
Acco1000039g0006 1119 Pfam Leucine rich repeat 206 263 IPR001611 GO:0005515
Acco1000039g0006 1119 FunFam Leucine-rich repeat protein kinase family protein 53 296 - -
Acco1000039g0006 1119 Gene3D Ribonuclease Inhibitor 46 284 IPR032675 -
Acco1000039g0006 1119 ProSiteProfiles Leucine-rich repeat profile. 182 203 IPR001611 GO:0005515
Acco1000039g0006 1119 ProSitePatterns Serine/Threonine protein kinases active-site signature. 924 936 IPR008271 GO:0004672|GO:0006468
Acco1000039g0006 1119 SUPERFAMILY Protein kinase-like (PK-like) 797 1105 IPR011009 -
Acco1000039g0006 1119 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 110 1107 - -
Acco1000039g0006 1119 ProSiteProfiles Leucine-rich repeat profile. 228 249 IPR001611 GO:0005515
Acco1000039g0006 1119 FunFam Leucine-rich repeat protein kinase family protein 829 1110 - -
Acco1000039g0006 1119 ProSiteProfiles Leucine-rich repeat profile. 252 273 IPR001611 GO:0005515
Acco1000039g0006 1119 Pfam Protein kinase domain 816 1102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco1000039g0006 1119 MobiDBLite consensus disorder prediction 468 492 - -
Acco1000039g0006 1119 MobiDBLite consensus disorder prediction 452 496 - -
Acco1000039g0006 1119 SMART LRR_bac_2 226 245 - -
Acco1000039g0006 1119 SMART LRR_bac_2 203 222 - -
Acco1000039g0006 1119 SMART LRR_bac_2 180 199 - -
Acco1000039g0006 1119 MobiDBLite consensus disorder prediction 1 32 - -
Acco1000039g0006 1119 SMART LRR_sd22_2 226 247 - -
Acco1000039g0006 1119 SMART LRR_sd22_2 250 271 - -
Acco1000039g0006 1119 SMART LRR_sd22_2 180 205 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco1000039g0006 811 1111 MAP Kinase Kinase Kinase AT2G24360 29.605 2.79e-26 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Acco1000039g0006 Pkinase 3.8e-37 CL0016