Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco1000039g0004 ATGGAGGAGGCACATGATTACTGCTTCGAGTGCCTCCAACTGCGAATCAAATCTGATTTCTCGGACCGACTCGTTTTCCACTATGGCATCTCCCCTTCCGCTTTTCCATTTGGATCATCAGCTATCGTTGAGATTCCTAGTACAACAGCTGGTGAGGTTTCAGCTGGTCAATTTATATTGTCCTACAAGCCCAGTCATGAGCAAGATTGTTTCACCAAGTTTATTGATGAACACTGTTCGGATAATGATTATTTCCGTACAAGTAATTATATACCTGGTGAAAGCCAGTATAATAATGATTTCAATGGTGGTATTCAAAGAGATGGAATTTCTTTGCTTGGGTCTGGAAGAAGAAAAGCTTGTTGTAACCATTCTAGAAGATTTTCTTGCTCAAGGATAATTGCCGCACTGGCTCCAATTGCTCGCACGGGAATCTCTTCCTATTCTACTTTTGAAGAGGTTGCAGCTGATTTCATGTCTGGTTCACTAGAGGATCACATATTGGATTCACTTAGTCTCACAATTGAGGGGAAAGCATCTGGCCGGGAAAGCATAAATTTGCTTAATCTAATTGGTTTGCCTTCATTTGAGGAAGATACTGTTCCAGGTTCATTGAGGCATCCAAACATAGCGCCTGTTATTGCAATGTTGAAAACATCCAATCATGTTAACATGGTTCTTCCAAAGACCCCCTATACCTTGGAAAGTACTCTTCACTATAACCCCAATGCATTAAAGTCTGACTGGCATAAAAGATTTCTTATATATCAGATACTCTCTGCGTTATGGTACCTACATGATCTTGGGGTATCCTATGGGAATTTATGCCCATCCAATGTCATGCTGACTAACTCGTTATGGTCGTGGCTGTGTTTGTGGAATGAACCTGAATTGGGGTATGCCTTAAAGCCACAAGAGAGTGAAAGAAATGGTTCTACCATGTCAAAAATTCGTTGTTTCAATGGGGGTTGCGAATCTGCTAGCCTTTATGCAGATCTAAAGCTTTCTCCATCAATAGATTGGCATTCTAGCTTTACTAAGTGGTGGAGAGGTGAATTAAGTAATTTTGAGTATTTACTGATCTTAAATAAATTGACAGGGAGAAGGTGGGGGGATCACACATTTCATCCAGTATTGCCTTGGATAATAGACTTTAGCACGAAACCTGATGAGAATTGTGATGCTGGATGGAGAGACTTAAGCAAGAGTAAATGGCGCCTGGCTAAAGGTGATGAACAGTTGGATTTTACCTATTCAACTTCTGAAATCCCTCATCATGTATCAGATGAATGTCTGTCTGAACTGGCTGTCTGCAGTTACAAAGCAAGAAGGCTACCTCTGAGTGTTCTTCGTATGGCTGTTCGTACAGTTTATGAACCTAATGAGTATCCTTCTACAATGCAGAGACTCTACCAATGGACCCCTGATGAATGCATTCCGGAGTTCTATTGTGATACTAGAATTTTTAAGTCAGTTCATGATGGTATGGCAGATTTGGCTGTACCTTCATGGGCAGAAAGTCCCGAAGAGTTCATTAAATTGCATCGTGATGCATTAGAAAGTAATAGGGTTTCATTGCAGCTCCATCATTGGATAGATATCACATTTGGGTACAAAATGTCAGGTGAGGCAGCTATTGCTGCCAAGAATGTTATGCTTCCTGTATCAGAACCCATGATGCCAAGATCAACGGGACGCCGTCAGCTCTTTACTCGGCCACACCCCATTCGTCATGGCAGTACCAGAATAACATGTCATTCTACCAATAACAATGCCAAAGTTTGTGCACATGTGAATGAATTGCAAAATGAGATCCTCTCTGAAGCTGGTTATCTGCAAGAACTAGAAGAAGCATCAAAATTTTCTGAGCATGCTAGGCATTTGAGTGCTTCTTACCATTATCCATTAAATATGATAGATAGGGAAATCTCATCTTCAAAAGGCGCAACAAAGGAGACAGTTGGCCAAGTTATGCCCAAGCTATCTCTGATAGGCAAAAATCATATAGAGCATTCGAAAATAGATCTTATTTGTCTTCTTCAGCATATAAAGGAGGAAGGTGAATGTTCATCAGGATATCCAGACTTTTTGCTTTGGAGGCATAAATTTTCTTGTTCAAAACTCATCTCTGAAGATGTTGCAAGGGACATATTTTCTGTTGGTTGTATCCTATCAGAATTCTATCTGTGCAGGCCACTCTTTGATTCAACCTCATTGGCAACATACTTGGAGGATGGAACCTTGCCGGGATGTTTACAGGAACTGCCTCCTCATATTAGATTACTTGTTGAAGCATGCATTCAAAAAGATTGGACAAGGAGGCCAACAGCCAAAACTCTTCTGGGATCACCTTATTTTCCAAAGACTGTAAAATCTGCCTACCTATTTCTTGCCCCCCTTCAGCTTTTGGCTAAGAATGAAACCCGCCTTCGTTATGCTGCAAATTTTGCCAAGCAGGGAGCCCTCAAGGCAATGGGCACATTTGCAGCTGAAATGTGTGCCCCTTTTTGCTTGCCACTTGTGTTAGATACTGCGAATGTCGCTGAAGCTGAATGGGCCTCTGCACTAGTTAAAAAATTCATAAAATGCTTAACAGCACAAGCAGTGAAAACATTAGTCTTACCAACCATCCAAAAAATCTTGCAGACTACAAGTGACTCTCATTTGAAGGTTTCTCTTTTACAAGATACTTTTGTACGTAAAATATGGAATAAAGTTGGTAAACAGACATACTTGGAAACTATTCATCCCTTGGTCTTGTCAAACCTGTATATTTCTCCACAGCAAACTTCAGCCGTCTCGGCTTCTGTGCTGTTAATTGGTTCCAGTGAGGAGCTTGGTGTACCCATTACCATCCATCAGACAATCTTGCCTCTGGTTCACTGCTTTGGAAAAGGACTATGTGCTGATGGAATTGATGTGCTGGTCAGAATTGGTGGTGTTTTTGGTGAATCCTTTATTGTCAGACAGTTGCTGCCAATACTAAAGAACATGATTCATTACTTCATTGATGCATCATGCATGAATAAGCCGGATCCTGTCCAGAGCTGGAGTGCTTTAGCACTTATTGATTGCATGATGATGTTAGATGGTCTTGTGGCTTTCCTCACGCAAGAAGCTATTGTGAAGGAGCTGCTTGAAGATCAAAGGTGCCTATACATTGAGGTTCTTAAGCAGAAACATATGGAAATTGCGCTGCTTCAGATTGCTGCCACTACTCTATTTTCGATTTGTCAACGGATTGGGCAAGACTTGACGGTGCTTCATATTCTACCAAAACTCAAAGAACTATTCGATGAGCTTGCTTTCTCAAAGGAAGTTGCTAAAGGTTCTGCTACTGCTGGCAGAAGCTTGAAGATTGCCAAGTTAAAAATTGTTGGGGAGTTACAAATAGAAAGTCGAATGGATCTAGTATTTCTTCTCTATCCTTTCTTTGCATCTCTTCTTGGGATAGAAAAACTTCGTCAATGTTGTGCTACATGGTTGCTTCTTGAACAATTTCTTCAACGTCGTCATAATTGGAAGTGGGAATATTCAGGAGAGTCATCAAAGAGTGGTTCAGAAAATAGTATTGCCCGAAGACCGACAACTGCAAGGGGAACTAAAAATGAATGTAATCCGGAAAAGTTATTGCTCAATGGGGTTGGCTGGTCGATTCCTCAATCCCAAGGAAGTAGAAGTTCCAAAAACTTGATCTCCCCAAGACGATCAAATGAAGTTCATCAAAGTCCAGCCTTAGTGCATGAAGGAATGTCATGTCAAATGAATCGTGAACCCTGGTTTTGGTTCCCTAGTTCAGCCACTATCTGGGATGGACCTGAATTTCTTGGGCGTGTGGGGCTTCAAAAAGATGACCTTCCCTGGAAGATTAGAGCATCCGTTATATACTCTACACGTGCACATCATGGAGCTGTGAGGTCTTTAGCTGTATGTCAAGATGAGTGTACTGTTTTCACCGCAGGTGTTGGCCAGGGGTATAAAGGAATTGTTCAGAAGTGGGAACTTAGTCGAACTAGCTGTTTATCTGGCTATTACGGCCATGAAGAGGTTGTGAACGATATTTGTGTCTTATCATCCAGTGGAAGAGTGGCATCTTGTGATGGAACCATTCATGTGTGGAATAGTCAAACAGGGAAGACAGTATCAATATTTGCTGAGTCTCCAATAGAAGTTACCCCCTCTTCAAGCCATATATCTTCTCTGTCAAAGATAAACAGTGACCAGGCTAATGTGCTTAATTTGAATACCTTATCAAATGGAATATTGTCTAGCGCCTTTGATTCAAGCCTTTACACGTGTATGCATCTATTAGACTCTCCCGAAATTCTTGTAGTTGGAACTGGAAATGGATCTCTCAGGTTCATTAATGTTGATCGAGGTCAAAAGCTTCATATCTGGAGAGGGGAATCTAATGAATCTAGTTTCCCTTCTTTTATTTCTGCCATATGTTCCTCTAGGGCTGACAAGATGCAAACAGATGGAGCTTCTAATACTTTGCCATCTTTTATTGCAACTGGACTAAGTTCTGGTCATTGTAAATTATTTGATGCAAAGAGTGGAAATGTCATTACCTCATGGCGAGCTCATGATGGATATGTGACTAAGCTGGCAGCACCTGAGGACCATCTGCTCATTTCTAGCTCTCTTGACAAAACATTACGGGTCTGGGACTTAAGGATGAATTTTCAGACACAGCCAGTCACTTTCAGAGGTCACTCAGATGGCATATCAAGTTTCTCCATTTGGGGCCAAGATGTTATTTCAATTTCCAAAAGTAGAATTGGACTTCTATCCTTGTCTAGATCTGCCGACGAAACGGACGGACATCACAACATTATTCCTCAAAAACTGTACACATCAGATAATGGATCAAAAAGCTTGTCATCATTGTCAAGTATTAGTATACTTCCATTCTCTCGTTTCTTTCTTGTTGGAACAGAAGATGGTTATCTTAGTATCTGTTGTTAG 4968 0.4106 MEEAHDYCFECLQLRIKSDFSDRLVFHYGISPSAFPFGSSAIVEIPSTTAGEVSAGQFILSYKPSHEQDCFTKFIDEHCSDNDYFRTSNYIPGESQYNNDFNGGIQRDGISLLGSGRRKACCNHSRRFSCSRIIAALAPIARTGISSYSTFEEVAADFMSGSLEDHILDSLSLTIEGKASGRESINLLNLIGLPSFEEDTVPGSLRHPNIAPVIAMLKTSNHVNMVLPKTPYTLESTLHYNPNALKSDWHKRFLIYQILSALWYLHDLGVSYGNLCPSNVMLTNSLWSWLCLWNEPELGYALKPQESERNGSTMSKIRCFNGGCESASLYADLKLSPSIDWHSSFTKWWRGELSNFEYLLILNKLTGRRWGDHTFHPVLPWIIDFSTKPDENCDAGWRDLSKSKWRLAKGDEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRMAVRTVYEPNEYPSTMQRLYQWTPDECIPEFYCDTRIFKSVHDGMADLAVPSWAESPEEFIKLHRDALESNRVSLQLHHWIDITFGYKMSGEAAIAAKNVMLPVSEPMMPRSTGRRQLFTRPHPIRHGSTRITCHSTNNNAKVCAHVNELQNEILSEAGYLQELEEASKFSEHARHLSASYHYPLNMIDREISSSKGATKETVGQVMPKLSLIGKNHIEHSKIDLICLLQHIKEEGECSSGYPDFLLWRHKFSCSKLISEDVARDIFSVGCILSEFYLCRPLFDSTSLATYLEDGTLPGCLQELPPHIRLLVEACIQKDWTRRPTAKTLLGSPYFPKTVKSAYLFLAPLQLLAKNETRLRYAANFAKQGALKAMGTFAAEMCAPFCLPLVLDTANVAEAEWASALVKKFIKCLTAQAVKTLVLPTIQKILQTTSDSHLKVSLLQDTFVRKIWNKVGKQTYLETIHPLVLSNLYISPQQTSAVSASVLLIGSSEELGVPITIHQTILPLVHCFGKGLCADGIDVLVRIGGVFGESFIVRQLLPILKNMIHYFIDASCMNKPDPVQSWSALALIDCMMMLDGLVAFLTQEAIVKELLEDQRCLYIEVLKQKHMEIALLQIAATTLFSICQRIGQDLTVLHILPKLKELFDELAFSKEVAKGSATAGRSLKIAKLKIVGELQIESRMDLVFLLYPFFASLLGIEKLRQCCATWLLLEQFLQRRHNWKWEYSGESSKSGSENSIARRPTTARGTKNECNPEKLLLNGVGWSIPQSQGSRSSKNLISPRRSNEVHQSPALVHEGMSCQMNREPWFWFPSSATIWDGPEFLGRVGLQKDDLPWKIRASVIYSTRAHHGAVRSLAVCQDECTVFTAGVGQGYKGIVQKWELSRTSCLSGYYGHEEVVNDICVLSSSGRVASCDGTIHVWNSQTGKTVSIFAESPIEVTPSSSHISSLSKINSDQANVLNLNTLSNGILSSAFDSSLYTCMHLLDSPEILVVGTGNGSLRFINVDRGQKLHIWRGESNESSFPSFISAICSSRADKMQTDGASNTLPSFIATGLSSGHCKLFDAKSGNVITSWRAHDGYVTKLAAPEDHLLISSSLDKTLRVWDLRMNFQTQPVTFRGHSDGISSFSIWGQDVISISKSRIGLLSLSRSADETDGHHNIIPQKLYTSDNGSKSLSSLSSISILPFSRFFLVGTEDGYLSICC 1655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco1000039g0004 1655 SUPERFAMILY Protein kinase-like (PK-like) 203 291 IPR011009 -
Acco1000039g0004 1655 Pfam Beige/BEACH domain 347 557 IPR000409 -
Acco1000039g0004 1655 Gene3D - 1496 1654 IPR015943 GO:0005515
Acco1000039g0004 1655 Gene3D - 1282 1495 IPR015943 GO:0005515
Acco1000039g0004 1655 ProSiteProfiles Trp-Asp (WD) repeats profile. 1526 1559 IPR001680 GO:0005515
Acco1000039g0004 1655 SMART WD40_4 1459 1516 IPR001680 GO:0005515
Acco1000039g0004 1655 SMART WD40_4 1337 1374 IPR001680 GO:0005515
Acco1000039g0004 1655 SMART WD40_4 1291 1334 IPR001680 GO:0005515
Acco1000039g0004 1655 SMART WD40_4 1614 1655 IPR001680 GO:0005515
Acco1000039g0004 1655 SMART WD40_4 1407 1456 IPR001680 GO:0005515
Acco1000039g0004 1655 SMART WD40_4 1519 1557 IPR001680 GO:0005515
Acco1000039g0004 1655 Pfam Protein kinase domain 198 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco1000039g0004 1655 SUPERFAMILY Protein kinase-like (PK-like) 712 814 IPR011009 -
Acco1000039g0004 1655 Gene3D Transferase(Phosphotransferase) domain 1 196 291 - -
Acco1000039g0004 1655 SMART Beach_2 345 577 IPR000409 -
Acco1000039g0004 1655 ProSitePatterns Trp-Asp (WD) repeats signature. 1544 1558 IPR019775 -
Acco1000039g0004 1655 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1526 1559 - -
Acco1000039g0004 1655 SUPERFAMILY WD40 repeat-like 1294 1652 IPR036322 GO:0005515
Acco1000039g0004 1655 CDD Beach 347 577 IPR000409 -
Acco1000039g0004 1655 Gene3D Transferase(Phosphotransferase) domain 1 705 794 - -
Acco1000039g0004 1655 MobiDBLite consensus disorder prediction 1179 1204 - -
Acco1000039g0004 1655 SUPERFAMILY BEACH domain 336 577 IPR036372 -
Acco1000039g0004 1655 Coils Coil 598 618 - -
Acco1000039g0004 1655 Gene3D BEACH domain 338 577 IPR036372 -
Acco1000039g0004 1655 PANTHER GH12955P 1 1655 - -
Acco1000039g0004 1655 MobiDBLite consensus disorder prediction 1179 1203 - -
Acco1000039g0004 1655 Pfam WD domain, G-beta repeat 1521 1557 IPR001680 GO:0005515
Acco1000039g0004 1655 Pfam WD domain, G-beta repeat 1339 1374 IPR001680 GO:0005515
Acco1000039g0004 1655 ProSiteProfiles BEACH domain profile. 333 600 IPR000409 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Acco1000039g0004 Beach 1e-43 No_clan