Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco1000039g0002 ATGGAGGCGACGGCTGCTGCTGCTCCACAGCCAATGGAGGGGCTTCACGAAGCTGGTCCTCCGCCGTTTCTGACAAAAACATACGACATCGTCGACGATTTGTCCACCAACCACATAGTTTCGTGGAGCCGAGGTAACAATAGCTTCGTTGTCTGGGATCCACAGTCTTTCTCCATGACCCTCCTTCCCAGATTCTTCAAACACAGCAATTTCTCCAGCTTCGTCAGACAGCTTAATACCTATGGATTCAGAAAGGTTGATCCAGATAGGTGGGAATTCGCCAATGAAGGGTTTCTGAGAGGACAAAAGCATCTTCTCAAGAACATAAGGAGAAAGAAAACAACGCAGCAGCAGCAACAACAACATCATCATCACAAACACCATCATCAAGCTCTAGATTCATGCGTGGAAGTAGGCCAGTTCGGGCTGGATGGAGAGATGAACCGGCTCCAGCGAGACAAGCAGGTGCTGATGCTGGAGCTGGTGAAACTCAGGCAACAACAACAGAATACAAAAACCTACCTTCAACAAATGGAAGGTAGGCTCAAGAGAACCGAACAAAAGCAGCAACAAATGATGAATTTCTTAGCAAGAGCCATGCAGAACCCTAACTTTGTTCAGCAATTAGTTCAGCAGAAAGAATGGAAGAAGGAACTTGAAGAAGCAATCTCAAAGAAAAGAAGAACCATAGATCAAGGGCCTAGTAGTCATAATAATAATAATAATAATAATAATGTTGATGAGTTATTAGTAGGTCAATTAGATTGCTCAGATTTGGTTGAAATACTTGAACCTAATAATGATATTGCTGCTGCTGCTGCTGTTGGGGATTTGGATTTGATTGGCAAGTTAGAGGATGAAGATGAACAACATAATGAGGTAATCCAAAGTATTAATAGAGAGAAAGAGATTATTAATGACGATGAAGTGTTTTGGCAAGACTTGTTGAACGAGGATGTTCGAGAACTTCTACGAGGCTTCGAGGACGATGATGGGGAAGATGTTGATGTGGTGGCTGTGGCTGAACAACTTGGTTATTTAGCTTCTAGTAGTCCTTGTCATCATCAGTAA 1071 0.4304 MEATAAAAPQPMEGLHEAGPPPFLTKTYDIVDDLSTNHIVSWSRGNNSFVVWDPQSFSMTLLPRFFKHSNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKNIRRKKTTQQQQQQHHHHKHHHQALDSCVEVGQFGLDGEMNRLQRDKQVLMLELVKLRQQQQNTKTYLQQMEGRLKRTEQKQQQMMNFLARAMQNPNFVQQLVQQKEWKKELEEAISKKRRTIDQGPSSHNNNNNNNNVDELLVGQLDCSDLVEILEPNNDIAAAAAVGDLDLIGKLEDEDEQHNEVIQSINREKEIINDDEVFWQDLLNEDVRELLRGFEDDDGEDVDVVAVAEQLGYLASSSPCHHQ 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco1000039g0002 356 MobiDBLite consensus disorder prediction 111 131 - -
Acco1000039g0002 356 FunFam Heat shock transcription factor 1 16 113 - -
Acco1000039g0002 356 ProSitePatterns HSF-type DNA-binding domain signature. 62 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
Acco1000039g0002 356 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 9 252 IPR027725 -
Acco1000039g0002 356 Gene3D - 15 114 IPR036388 -
Acco1000039g0002 356 Pfam HSF-type DNA-binding 23 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Acco1000039g0002 356 Coils Coil 147 167 - -
Acco1000039g0002 356 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Acco1000039g0002 356 PRINTS Heat shock factor (HSF) domain signature 74 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
Acco1000039g0002 356 PRINTS Heat shock factor (HSF) domain signature 23 46 IPR000232 GO:0003700|GO:0006355|GO:0043565
Acco1000039g0002 356 Coils Coil 212 232 - -
Acco1000039g0002 356 Coils Coil 281 301 - -
Acco1000039g0002 356 MobiDBLite consensus disorder prediction 111 129 - -
Acco1000039g0002 356 SMART hsfneu3 19 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Acco1000039g0002 356 SUPERFAMILY "Winged helix" DNA-binding domain 19 112 IPR036390 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco1000039g0002 2 351 HSF AT3G22830 55.053 1.66e-127 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Acco1000039g0002 HSF_DNA-bind 1.1e-31 CL0123