Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g2163 ATGCCATCACGACCGTCTCCACCAACTCCGGCGGCGGCCATACCTACGGCCTCACCCTCCCATCACCACCGCCACCAATCAATCCTCATCGGAGTTATTGGTTTCGCTCTACTTCTCCTAATCCTCATGGTCTTCATCATAGTCTTCCTCTACCGCAAACTCTCTTATAACCGAACAGCACCATTCGACCACTATAACCACAGTCATCAGCATCGCCGTTTCTCATACTCTCTCCTTCGACGTGTCACCAACTCCTTCTCTGCGTCCACCAAGCTCGGCCATGGCGGGTTTGGTTCCGTTCATAAGGCTACCCTGCCTTCCGGTTTATCCGTGGCTCTCAAGCTCATGGACTCCCCGGGGTCGCTTCAAGGCGAGCGCGAGTTTCACAACGAGCTTTCTCTCTGTTCCCAGCTTAGTTCTCCTTACATACTCTCTCTTCTGGGTTACTCTTCTGATCGACGAGGCCGAAAACTGATTTTGGTTTATGAACTCATGCCGAATCGTAGTTTACAAGATGCGTTGTTGGATAGGAAGTGCGAGGAGCTTATGGAGTGGAAGAAGAGATTCGATGTTGCTGTTCACATCTCGAAGGGTCTTGAATACCTTCACCATCATTGTAATCCGCCCGTGATTCATGGGGATATCAAGCCAAGTAATGTGTTGCTGGATGCCGACTTCTCGGCGAAAATTGGGGATTTTGGGCTTGCTAGGTTGAAAACGGAGGATCTGGAAATGGTGGAGGAAATTGGGGGAGAAGAAGAGGGCGCGAAGAAGAAGGATGGGGCTGCGGACTTGGGGGATGACCATGGGTCGATTTTGGAAGAAGCGGAGAGCGTCACAACTGGCTTTGAAGAAGGTAGTGCAGTGGTCGATCGGTCGCCAGAGAGTTGCTTGATTAGGATTTTGGATTCTGAGGCTTCCCCGGAGACGACGTTAGCGCTGTCGCCAGAGGCGGGGGTCGATAAAGCAAGCGTCTCAGAAGGGTGCTTTGATAAATTTAGCATTGATAGTGGAAAAGATTTGATCGGTAATAATCGGAAGAAGGGTGGTTCGGGCAGGGACTGGTGGTGGAAGCAGGACAATGGAGGAGGGTCGGAATCGGGCCGGGTGAAAGACTATGTGATGGAGTGGATCGGGAGTGAGATTAAGAAGGAAAGACCAAAAAGCGAATGGATTGCGTCTCCGAGCACCGCAGGGACTAGCTCTCCGGGCCAGAAAATGGAGTCGAAGAAGCAGAAAAAGAGATTGGATTGGTGGGCATCACTAGATGAGGAAAAAGTCAAGAAGAAGGAGAAAAACCGAAAACCCAGAGAATGGTGGAAGGAGGAGTTCTGTGAGGAGCTCTCGAAGAAGAAAAAAAGAAGTCTGGATTCGAATTACGTTGGGGAATCATGGTGGCAGAAAGATGATGAAATGGTATCAGAGAAGAAGAAGAAGAAGAAGAAGAGGAAAAGCAAGAGTAGCAGAGGAAGCATTGACTGGTGGTTGGATGGTTTGAGCGGTGAGCTCAGAAATGGCAGAAGAAATAGCCAGGATTGGGTTAGTGGGGATATAGCCAAGAGTGGAGGAATTAGCAGCACGCCGAGTATGAGAGGCACTGTTTGTTACATTGCTCCCGAGTACGGTGGCGGTGGACAGCTTTCTGAGAAATGTGATGTCTACAGTTTTGGAGTTCTGCTCTTGGTTTTGATAGCAGGAAGACGACCTCTTCAAGTTACAGCATCACCAATGTCAGAATTTGAAAGGGCTAATCTCATTTCATGGGCTCGGCAACTTGCCCACAGTGGGAGGCTTTTGGATCTTATAGACCCTTCCATTCATTCATTAGACAAGGAGCAGGCATTGCTCTGCATCACCATTGCCTTGTTATGTCTACAGAGATCCCCAGCAAAGCGACCTACCATGAAAGAGATTGTAGGCATGCTTTCTGGTGAGGCTGAGCCACCTCACTTACCTTTTGAGTTTTCGCCATCACCGCCGTCCAATTTTCCGTTCAAGTCCCGAAAGAAGGCTCGGTGA 2019 0.4958 MPSRPSPPTPAAAIPTASPSHHHRHQSILIGVIGFALLLLILMVFIIVFLYRKLSYNRTAPFDHYNHSHQHRRFSYSLLRRVTNSFSASTKLGHGGFGSVHKATLPSGLSVALKLMDSPGSLQGEREFHNELSLCSQLSSPYILSLLGYSSDRRGRKLILVYELMPNRSLQDALLDRKCEELMEWKKRFDVAVHISKGLEYLHHHCNPPVIHGDIKPSNVLLDADFSAKIGDFGLARLKTEDLEMVEEIGGEEEGAKKKDGAADLGDDHGSILEEAESVTTGFEEGSAVVDRSPESCLIRILDSEASPETTLALSPEAGVDKASVSEGCFDKFSIDSGKDLIGNNRKKGGSGRDWWWKQDNGGGSESGRVKDYVMEWIGSEIKKERPKSEWIASPSTAGTSSPGQKMESKKQKKRLDWWASLDEEKVKKKEKNRKPREWWKEEFCEELSKKKKRSLDSNYVGESWWQKDDEMVSEKKKKKKKRKSKSSRGSIDWWLDGLSGELRNGRRNSQDWVSGDIAKSGGISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLIAGRRPLQVTASPMSEFERANLISWARQLAHSGRLLDLIDPSIHSLDKEQALLCITIALLCLQRSPAKRPTMKEIVGMLSGEAEPPHLPFEFSPSPPSNFPFKSRKKAR 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g2163 672 ProSitePatterns Protein kinases ATP-binding region signature. 92 114 IPR017441 GO:0005524
Acco09g2163 672 Gene3D Transferase(Phosphotransferase) domain 1 498 648 - -
Acco09g2163 672 Gene3D Transferase(Phosphotransferase) domain 1 165 260 - -
Acco09g2163 672 MobiDBLite consensus disorder prediction 650 672 - -
Acco09g2163 672 SMART serkin_6 86 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g2163 672 MobiDBLite consensus disorder prediction 343 366 - -
Acco09g2163 672 FunFam Os07g0541700 protein 165 249 - -
Acco09g2163 672 Pfam Protein kinase domain 88 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g2163 672 Pfam Protein kinase domain 527 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g2163 672 ProSiteProfiles Protein kinase domain profile. 86 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g2163 672 PANTHER OS07G0586332 PROTEIN 1 672 IPR044576 -
Acco09g2163 672 MobiDBLite consensus disorder prediction 386 414 - -
Acco09g2163 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Acco09g2163 672 SUPERFAMILY Protein kinase-like (PK-like) 61 661 IPR011009 -
Acco09g2163 672 Gene3D Phosphorylase Kinase; domain 1 57 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g2163 Acco-ChrAcco09 38548912 38550930 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g2163 520 642 Receptor kinase-like Gene Family AT3G58690 37.209 2.64e-15 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Acco09g2163 Pkinase 1.1e-26 CL0016