Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g2147 ATGTTGGGCTCAAACACCAATTTGGTGACCACGGTGATTGGATTTGGTATGAGTGCGACTTTTATTGTGTTTGTCTGTACAAGAATAATCTGTGGAAGGTTGCGAGGCTCCTCCGAATCTCATAATATGCTTGAATTTGAGCCTAGGATGGACATAGAACAGCCAGAAAATCTTGTTAACCGCCCGGAACCTGTTCTCGTTACCGCAATTCCCACCATGAAGTTCGATCGAGAGGCTTTCAGTTCTATTGAAAATACACAGTGCGTGATATGTTTGGCAGAGTACAAAGAAAGAGAGGTACTGCGTATCATGCCAAAATGTGGTCATAGCTTCCATCTTTCTTGCATTGATATATGGCTGAGGAAACAATCCACCTGCCCGGTATGCCGTCTTCCATTGCAGAATTCTTCTGAAACAAAGCACGTGAGACCGGTAACGTTCAGCTTGGGGCAAGGCGAGTCTCAGACTTCTGAAAGTAGAGACAGTGAGAGGAATATTGAGCCTGTGCCAGGGAATCCCTCGCCCTTGCACCAATCACATGCTGCAGAAGCAGAAACAAGGGAGTGA 567 0.4603 MLGSNTNLVTTVIGFGMSATFIVFVCTRIICGRLRGSSESHNMLEFEPRMDIEQPENLVNRPEPVLVTAIPTMKFDREAFSSIENTQCVICLAEYKEREVLRIMPKCGHSFHLSCIDIWLRKQSTCPVCRLPLQNSSETKHVRPVTFSLGQGESQTSESRDSERNIEPVPGNPSPLHQSHAAEAETRE 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g2147 188 SUPERFAMILY RING/U-box 79 136 - -
Acco09g2147 188 MobiDBLite consensus disorder prediction 140 188 - -
Acco09g2147 188 MobiDBLite consensus disorder prediction 140 156 - -
Acco09g2147 188 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 140 IPR013083 -
Acco09g2147 188 Pfam Ring finger domain 87 130 IPR001841 -
Acco09g2147 188 PANTHER OS11G0150450 PROTEIN 1 166 - -
Acco09g2147 188 CDD RING-H2_EL5-like 87 130 - -
Acco09g2147 188 ProSiteProfiles Zinc finger RING-type profile. 88 130 IPR001841 -
Acco09g2147 188 SMART ring_2 88 129 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g2147 Acco-ChrAcco09 38397411 38398814 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g2147 8 133 C3H Transcription Factor Family AT1G72220 32.061 6.58e-20 84.3