Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g2140 ATGGGGGTGGGAGGAAAATTCTGGGATTTGCTAAAGCCATATGCGCGAGCCGAAGGTTTCGATTTCTTAAGGGACAAGCGAGTCGCTGTGGACCTCTCCTTCTGGATTATCCAGCACCAGACTGCTATCAAGAAACATGCTCGGAAGCCCCATCTACGCCTTATCTTCTTCCGCACCATCAATCTCTTCTCCAAGTTTGGAGTATATCCAGTCTTCGTGGTAGATGGGACCCCACCGCCGTTGAAATCACAGGCTAGGATTTCAAGGTTTTCCCGTTTTTCCGGCATTGTACTGAAAGATTCTCCGGTGGTTGAAGAAAGTGTTCCCGTTGAGAGGAACCGTGCATTTTCAAGGCATGTACAAGAATGTGTGGAACTTGTGGAGTTACTTGGAATGCCTGTGCTATATGCTAAAGGAGAGGCAGAAGCACTCTGTGCCCAATTAAATAGTGAAGGTTATGTAGATGCTTGCATCACATCTGATAGTGATGCCTTCCTATTTGGCGCGAAATGCATTATAAAGAGCTTCTGCACTAATGGTAAAGAAGCTTTTGAATGCTACAATATGGAAGATATTGAAGCTGGTCTTGGATTGAAGAGGAAACACCTCATAGCTATTTCTCTTCTCGTTGGAAATGATTATGATTTAACAGGTGTTCAGGGGATTGGGCTTGATACAGCTCTTCGTTTTGTTAGATGTTTTAGTGAAGAAGATGTATTGAATAGATTGCGAGAGATTGGCAATGGGAAAGTTTCATCAGCTCCCGCCAGCATTAAATCTGCTGAAAATTGTGCTGACATGGATGGGAACTTTCCAAGCCGAAAACAACTTCATTGTTCATTTTGCGGGCATCCAGGCAGCAAAAGAGATCATATGAAATCTTCTTGTGAATTTTGCATGACAAGTTATGATGATGAAGGTTGCTTGAGAAAACCGGAAGGCTTTACTTGTGGTTGCCCTTCCTGTGACATGATTAGGAAACATAAGGAGCAGAGAAGGATGGAAAATTGGTACGCTAAAGTTTGTCTCAAGATTGCAGAGGACCTCAAATTTCACAGAGATGAAATTATTGAATTGTACTTATGCAATGACAATGGGGTTTATCCTGCAAGTGATGGTCCTTGCATTTCATGGAGTAGACCCAAGATTGAGATGCTGATAGATTTTTTAAAATTTCATCAGCACTGGGATCCATCTTACGTTCGCCGGCAGATTTTCCCTATGATGTCTACCATATTTTTTAGAGACATGGCTAATACTCCAGTAGAAAGTCTGGTATTTGGGACATTTGAGTTTGGTTCAATACAACGTGTGAAGATAAGATCTGGATATCAATTTTATGTTGTCAAGTGGAAACGAGCAGTTGACAACATTAGTTGTACAGTTCCATCACATGAATCTAGCATGCAACAAGAAGATGGTAGTGAGCTTGATGAATTTGTGGATCTTCTAGATGATCCTAGTGTTTCTGATACGGGTGATGGGTGTAGCTTCCTGTTGACAGATGAAAATATGAATCTTGTGAGGGCTGCTTTTCCAAAAAAAGTTGAAAGCTTCTGGCAAGAGCAGGAATTGAAGGGATCGAAAAGAAGAAAGAGTTGTACCCCACGATCTCTAGAGAAAGAGAGTTCATCATCATTAAACACAAGTACTGCTCAACTAAGCATTACAAAGTTCTACCGCTCAGTGAAAACGCAAAACCATTCAAAACAGCAAGTGGCATCTGATGGCTCTGATAACCTTGACAGTGGGAAAAGAACAATGTCCAGTCCAAATCTCACCAAATCAGCGAGGCGTCGCCTTTTATTTGACTAA 1815 0.4182 MGVGGKFWDLLKPYARAEGFDFLRDKRVAVDLSFWIIQHQTAIKKHARKPHLRLIFFRTINLFSKFGVYPVFVVDGTPPPLKSQARISRFSRFSGIVLKDSPVVEESVPVERNRAFSRHVQECVELVELLGMPVLYAKGEAEALCAQLNSEGYVDACITSDSDAFLFGAKCIIKSFCTNGKEAFECYNMEDIEAGLGLKRKHLIAISLLVGNDYDLTGVQGIGLDTALRFVRCFSEEDVLNRLREIGNGKVSSAPASIKSAENCADMDGNFPSRKQLHCSFCGHPGSKRDHMKSSCEFCMTSYDDEGCLRKPEGFTCGCPSCDMIRKHKEQRRMENWYAKVCLKIAEDLKFHRDEIIELYLCNDNGVYPASDGPCISWSRPKIEMLIDFLKFHQHWDPSYVRRQIFPMMSTIFFRDMANTPVESLVFGTFEFGSIQRVKIRSGYQFYVVKWKRAVDNISCTVPSHESSMQQEDGSELDEFVDLLDDPSVSDTGDGCSFLLTDENMNLVRAAFPKKVESFWQEQELKGSKRRKSCTPRSLEKESSSSLNTSTAQLSITKFYRSVKTQNHSKQQVASDGSDNLDSGKRTMSSPNLTKSARRRLLFD 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g2140 604 SUPERFAMILY PIN domain-like 6 213 IPR029060 -
Acco09g2140 604 SMART xpgineu 128 198 IPR006086 GO:0004518
Acco09g2140 604 MobiDBLite consensus disorder prediction 566 596 - -
Acco09g2140 604 MobiDBLite consensus disorder prediction 528 547 - -
Acco09g2140 604 Pfam XPG N-terminal domain 1 89 IPR006085 GO:0004518
Acco09g2140 604 MobiDBLite consensus disorder prediction 566 604 - -
Acco09g2140 604 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 1 545 IPR006084 -
Acco09g2140 604 CDD PIN_GEN1 2 202 - -
Acco09g2140 604 Gene3D - 198 262 - -
Acco09g2140 604 FunFam Flap endonuclease GEN-like 1 198 256 - -
Acco09g2140 604 Gene3D - 5 197 - -
Acco09g2140 604 FunFam Flap endonuclease GEN-like 1 2 197 - -
Acco09g2140 604 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 198 415 IPR036279 -
Acco09g2140 604 Pfam XPG I-region 131 213 IPR006086 GO:0004518
Acco09g2140 604 SMART xpgn3 1 96 IPR006085 GO:0004518
Acco09g2140 604 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 70 89 IPR006084 -
Acco09g2140 604 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 148 168 IPR006084 -
Acco09g2140 604 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 203 218 IPR006084 -
Acco09g2140 604 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 25 39 IPR006084 -
Acco09g2140 604 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 127 144 IPR006084 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g2140 1 232 Core DNA Replication Machinery Family AT5G26680 28.627 4.10e-19 88.2