Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g2129 ATGTTGTGCAAATTCCCTCGGAACTTGGAAGGAAAGATCACTATTGATCCTTATGTGATAATATCGGTATCAAATGCTATAATTGGGAGGACTTTTGTGATTAACAACTGTGAAAATCCTAATTGGAAGCAACATTTTAATGCTCCTGTTGCACATTATGCTGCTGAAGTGAACTTCCTTGTTAAAGACAATGATATAGTGGGCTCACAAATTATTAAAAATGTGGCGATTCCGGTGGAACAAATTTACTCAGGCTACTATACCTTGACCCTATCCATACAGTACATTCCAATTGAGAGGCTAAGCCATGATTATCAAGGAATTGACTCAGTACTTGATTGCAACGGCGTTCCAGGCACATATTTTCCTCTCAGGAAACGTGGGTCTGTTACTCTATACCAAGATGCCCATGTTCCTGATGGTTTACTGCCTCTTGTGATGCTTGGTGGAGGGAAATATCATGTTCATGGAAAGTGTTGGGCTGATATATTCAATGCCATACAGCAAGCCCGGCGTTTGATTTATATTACAGGGTGGTCGATGTGGCATCAAGTTAGGTTGGTGAGGGATGCTGCTTATCAATCAGGTTACACCCTCGGCGATCTTCTCAAGTCAAAGTCACAGGAAGGAGTAAGAGTTCTTCTCCTTATATGGGATGACCCGACGTCAAGGAAAATTTTGGGTTACAAAACAGTGAGTGATGTTACTTCTGTTATCGGTGTTTTTCATGGCAAGCTAAGCTTCCGTTGTAGTTGTCCACTTGTGCACATTATAGCTGATTCTGTGCTTCAAGTCTTGATGTTATTTAAGGATCTCCTTTCGAACATTCAGGATGGTGTAATGGCAACTCATGACGAGGAAACCCGTGGATTTTTCAAACACTCTTCTGTAAAAGTGCTGCTTTGTCCCCGTATTGCAGGAAAACGACATAGCTGGTACAAGCAAAAGGAAGTTGGAACCATATACACACATCATCAGAAAACTGTTGTTCTAGATGCTGATGCTGGAAATGAAAAAAGAAAAATTATAGCGTTCGTTGGAGGACTTGATTTGTGTGATGGGCGAAATGATTTCCCCCACCATCCCCTCTTTAGGACGCGCCATTCACTGCATAAGGATGACTATCACAACCCCACTTTTACGGAGCGATGGTTAAAAGCTACAAAACCTCGAGGGATTAAAAAGCTGAAAGCTTCTTACGATGACGCTTTACTTAAGCTGGAAAGACTTTCACAAATTGTTAGCCCGGCTGATATGGTTGCAGATGATAATGATCCCGATACTTGGCATATGTTTCGGTCAATTGATTCGAATTCTGTTAAGGGATTTCCAAAAGATCCCAAAAATGCAACAAAGAACAACCTAGCATGTGGGAAGAATGTATTGATTGACATGAACATACATACAGCATATGTGAAGGCCATTCGTGCTGCACAGCATTACATTTATATAGAGAATCAATATTTCATTGGTTCTTCGTACAATTGGAGTCATTGTAAAGACCTGGGCGCTAATAACTTAATTCCAATGGAAATTGCCCTTAAGATTGCTGAAAAGATAAAGGCAAATGAGAGGTTTGCAATGTATATTATTATACCAATGCGGCCAGAGGGTGTTCCATCTGGGTCTGCCACACAGAGGATTCTATTTTGGCAGCAAAAAACAATGCAAATGATGCATGAGACAGTTTCAAAGGCTTTGGTTGAGGCTGGGCTAAAAGCAGCATTCTATCTACAGGATTATTTAAACTTTTTCTGTCTCGGAAATCGCGAAATCATTGATATGGACACTGAGATTGCAATGGGAGCCTACCAACCTAAGTATACTTGGGCAAGACAACGTTCTTATCCACGTGGCGAGGTGCATGGATATAGGATGTCACTTTGGGCTGAGCACACAGGAACACTTGAAGAGTGCTTCTTACGGCCAGAGAGCCTTGGATGTGTAAGAAGGATCAGAACGATGGGTGAAATTAACTGGAAGCAATTTGCAGCGAATGAAATAACAGAGATTAGAGGGCACCTTCTCAAATACCCAGTTGAAGTTGATCGAAATGGTAAGGCTCGTGGTGCCAGTGATTAG 2082 0.415 MLCKFPRNLEGKITIDPYVIISVSNAIIGRTFVINNCENPNWKQHFNAPVAHYAAEVNFLVKDNDIVGSQIIKNVAIPVEQIYSGYYTLTLSIQYIPIERLSHDYQGIDSVLDCNGVPGTYFPLRKRGSVTLYQDAHVPDGLLPLVMLGGGKYHVHGKCWADIFNAIQQARRLIYITGWSMWHQVRLVRDAAYQSGYTLGDLLKSKSQEGVRVLLLIWDDPTSRKILGYKTVSDVTSVIGVFHGKLSFRCSCPLVHIIADSVLQVLMLFKDLLSNIQDGVMATHDEETRGFFKHSSVKVLLCPRIAGKRHSWYKQKEVGTIYTHHQKTVVLDADAGNEKRKIIAFVGGLDLCDGRNDFPHHPLFRTRHSLHKDDYHNPTFTERWLKATKPRGIKKLKASYDDALLKLERLSQIVSPADMVADDNDPDTWHMFRSIDSNSVKGFPKDPKNATKNNLACGKNVLIDMNIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSHCKDLGANNLIPMEIALKIAEKIKANERFAMYIIIPMRPEGVPSGSATQRILFWQQKTMQMMHETVSKALVEAGLKAAFYLQDYLNFFCLGNREIIDMDTEIAMGAYQPKYTWARQRSYPRGEVHGYRMSLWAEHTGTLEECFLRPESLGCVRRIRTMGEINWKQFAANEITEIRGHLLKYPVEVDRNGKARGASD 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g2129 693 ProSiteProfiles C2 domain profile. 1 93 IPR000008 -
Acco09g2129 693 Gene3D Endonuclease Chain A 430 598 - -
Acco09g2129 693 SUPERFAMILY Phospholipase D/nuclease 466 561 - -
Acco09g2129 693 Gene3D Endonuclease Chain A 152 399 - -
Acco09g2129 693 SUPERFAMILY Phospholipase D/nuclease 115 361 - -
Acco09g2129 693 PIRSF PLD_plant 593 693 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Acco09g2129 693 PIRSF PLD_plant 379 595 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Acco09g2129 693 PIRSF PLD_plant 259 383 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Acco09g2129 693 PIRSF PLD_plant 3 238 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Acco09g2129 693 Coils Coil 393 413 - -
Acco09g2129 693 Pfam C2 domain 12 85 IPR000008 -
Acco09g2129 693 Gene3D C2 domain 6 96 IPR035892 -
Acco09g2129 693 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 320 355 IPR001736 GO:0003824
Acco09g2129 693 Pfam Phospholipase D Active site motif 321 355 IPR001736 GO:0003824
Acco09g2129 693 Pfam Phospholipase D C terminal 637 688 IPR024632 -
Acco09g2129 693 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 12 96 IPR035892 -
Acco09g2129 693 SMART C2_3c 7 91 IPR000008 -
Acco09g2129 693 PANTHER PHOSPHOLIPASE D 595 688 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g2129 Acco-ChrAcco09 38279516 38285092 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g2129 9 689 Phospholipase D Gene Family (Wang group) AT4G00240 56.566 0.0 856