Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g2117 ATGAGTTTTGTGGGGTATTCAGATATTGCTCATTACAGCTGCAGCGATTCTTGTAGAATGCCCTCTGGTGTAATCTCACAGCCTCGCCTTCTCACTTCCACTCCCACAACTAAAACCATGTTCAACTCTCCTGGCCTGTCACTTGCCCTTACGGATATAGATGGGCAGAGGGATGGGAATAGAATGTGTGAGAATTACAAGATGAATGTTAATGGGAGACGAAGCAGAGAAGAAGAGCAAGAAAGCAGATCTGGAAGTGATAACTTGGATGTTGCTTCCGGCGACGAACAAGACACCTCCGATCACCCTCCCAGGAAAAAGCGCTACCACCGACACACCCCTCAACAGATACAAGAGCTTGAAGCACTGTTCAAGGAGTGTCCTCACCCGGATGAGAAGCAGAGATTGGAACTGAGCAAGAGGCTTTGTTTGGAGACAAGGCAAGTTAAATTTTGGTTCCAGAACAGAAGAACTCAGATGAAGACCCAATTGGAACGCCATGAGAATACACTGCTTAGGCAAGAGAATGACAAGCTTAGAGCTGAGAACATGTCCATTAGGGACGCCATGAGGAACCCCATTTGCTCAAACTGTGGGGGACCGGCTATAATTGGAGAAACTTCACTCGAGGAACAGCATCTTCGGGTTGAAAATGCCCGGTTAAAGGACGAACTAGACCGGGTTTGTGCCCTCGCCGGAAAGTTCCTCGGCCGCCCGGTTTCTTCGTACTCCAACTCAATGGCTCATCCATTGGCAAACTCAAGTTTGGAGCTTGGAGTTGGGAGCAATGGATTTGGCGGTATGAGCACTGTGCCTGCAACACTGCCCGTTGGGCCTGACTTGGGTGTGGGTATGTCTAGCCCTTTAGCAATGGGAACTCCTCATCCCGCCCCGGCCAGCTCCGGGTCAACAGAGAGGTCAATGTTTCTAGAGCTTGCTTTGGCTGCCATGGATGAATTGGTGAAGATGGCTCAGACTGATGAGCCTCTATGGATGACCAGTTTGGAAGGTGGAAGAGAAATCCTGAACCATGAGGAGTACTCAAGGAGTTTCACTCCTTGCATTGGCTTAAAACCTAATGGCTTTGTGTCTGAAGCCTCAAGAGAGACTGGATTGGTCATCATAAACAGCTTGGCCCTTGTTGAAACTATGATGGACTCGAACCGTTGGGCAGAGATGTTTCCTTGTATGATTGCAAGAACTTCCCCTCCTGAAGTAATATCTGGCGGAATAAATGGGACCAGAAATGGCGCTCTACAACTAATGCATGGTGAGCTGCAAGTACTATCGCCGTTGGTGCCGGTTCGGGAGGTGAGTTTCCTGAGGTTCTGCAAGCAGCATGCGGAGGGAGTGTGGGCTGTTGTGGATGTGTCAGTCAGGGAAACTTGTGGTTCATCACCTTTTGTGAACTGTAGGAAGCTTCCTTCGGGCTGTCTCGTTCAAGACATGCCCAATGGGTACTCAAAGGTGACATGGGTGGAGCATGCAGAATACGATGAAAGGCAAGTTCACGAGCTGTATAGAGGCTTGTTAAGTTCAGGCGTGGGTTTTGGCGCCCAACGGTGGCTGGCCACCCTCCAGCGTCAATGCGAATGCCTCGCCATTTTAATGACATCCTCACGAGACCATTCTGCCATCACTGCGGGCGGCCGGCGGAGCATGCTGAAGCTAGCGCAGCGCATGACTAACAACTTTTGCGCCGGCATTTGTGCCTCCACCGTGCATAAGTGGAACAAGCTTAATGCCGGCAACGTTGGTGAGGATGTCCGGGTCATGACTCGCAAGAGTGTCGACGACCCTGGGGAACCGCCGGGGGTCGTGCTGAGCGCTGCCACGTCGGTGTGGCTGCCGGTATCGCCGCAGCGACTGTTCGACTTCCTACGGGACGAACGGCTCCGGAGCGAGTGGGACATACTGTCGAACGGTGGGCCCATGCAGGAGATGGCCCACATCGCCAAGGGCCATGACCACGGCAACTGCGTCTCCCTCCTCAGAGCCAGCGCTGTGAATTCCAGCCAGAGCAGCATGCTCATATTGCAGGAGACATGCATCGACGCGTCGGGGGCACTCGTTGTGTACGCGCCGGTGGATATTCCGGCCATGCACGTGGTCATGAACGGTGGCGATTCAGCCTACGTGGCGTTACTCCCGTCGGGGTTCGTGATTGTGCCAGACGGGTCTGGTTCACGCGGGTCGCAATCCCACAGCAACGGCGGGGGCGGCAGAGGGAGCGGGTCACTCCTGACTGTGGCGTTTCAGATACTGGTGAATAGCCTGCCGACGGCGAAGCTGACGGTAGAGTCGGTGGAGACGGTGAACAATCTCATATCTTGTACGGTGCAGAAGATAAAGGCCGCACTTCCATGTGAAAGCTGA 2376 0.5324 MSFVGYSDIAHYSCSDSCRMPSGVISQPRLLTSTPTTKTMFNSPGLSLALTDIDGQRDGNRMCENYKMNVNGRRSREEEQESRSGSDNLDVASGDEQDTSDHPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMSIRDAMRNPICSNCGGPAIIGETSLEEQHLRVENARLKDELDRVCALAGKFLGRPVSSYSNSMAHPLANSSLELGVGSNGFGGMSTVPATLPVGPDLGVGMSSPLAMGTPHPAPASSGSTERSMFLELALAAMDELVKMAQTDEPLWMTSLEGGREILNHEEYSRSFTPCIGLKPNGFVSEASRETGLVIINSLALVETMMDSNRWAEMFPCMIARTSPPEVISGGINGTRNGALQLMHGELQVLSPLVPVREVSFLRFCKQHAEGVWAVVDVSVRETCGSSPFVNCRKLPSGCLVQDMPNGYSKVTWVEHAEYDERQVHELYRGLLSSGVGFGAQRWLATLQRQCECLAILMTSSRDHSAITAGGRRSMLKLAQRMTNNFCAGICASTVHKWNKLNAGNVGEDVRVMTRKSVDDPGEPPGVVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGHDHGNCVSLLRASAVNSSQSSMLILQETCIDASGALVVYAPVDIPAMHVVMNGGDSAYVALLPSGFVIVPDGSGSRGSQSHSNGGGGRGSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALPCES 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g2117 791 Coils Coil 157 189 - -
Acco09g2117 791 ProSiteProfiles START domain profile. 302 535 IPR002913 GO:0008289
Acco09g2117 791 CDD START_ArGLABRA2_like 306 531 - -
Acco09g2117 791 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 102 787 IPR042160 -
Acco09g2117 791 Pfam Homeodomain 106 161 IPR001356 GO:0003677
Acco09g2117 791 ProSitePatterns 'Homeobox' domain signature. 138 161 IPR017970 GO:0000981|GO:0006355
Acco09g2117 791 SUPERFAMILY Homeodomain-like 92 163 IPR009057 -
Acco09g2117 791 SUPERFAMILY Bet v1-like 557 784 - -
Acco09g2117 791 FunFam Homeobox-leucine zipper protein HDG1 93 179 - -
Acco09g2117 791 ProSiteProfiles 'Homeobox' domain profile. 103 163 IPR001356 GO:0003677
Acco09g2117 791 SMART HOX_1 104 167 IPR001356 GO:0003677
Acco09g2117 791 Gene3D - 92 179 - -
Acco09g2117 791 SMART START_1 311 532 IPR002913 GO:0008289
Acco09g2117 791 FunFam Homeobox-leucine zipper protein GLABRA 2 311 531 - -
Acco09g2117 791 MobiDBLite consensus disorder prediction 67 113 - -
Acco09g2117 791 SUPERFAMILY Bet v1-like 305 532 - -
Acco09g2117 791 CDD homeodomain 105 163 IPR001356 GO:0003677
Acco09g2117 791 MobiDBLite consensus disorder prediction 70 85 - -
Acco09g2117 791 Pfam START domain 311 532 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g2117 Acco-ChrAcco09 38133361 38138940 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g2117 35 791 Homeobox Transcription Factor Family AT3G61150 67.178 0.0 1015
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Acco09g2117 START 1.6e-51 CL0209