Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g2112 ATGTTAAGTACAGCCTCGTTACCGGCAGCTCTACCAGATTCCGCCGCAGACTCCTCGCCCCTTCTTCGTTACTCCGTCTCCGATCAATTGCTCCGAGGGACGTCGGGGCCATTACGGAGGGCGACGCAGTTCTTCCGTCATGCGAGCGGGCGGCGGATGATGCTCCGGGAGCCGTCGGTGCGTGTGCGGGAGAACGCGGCGGAGCAGCTGGAGGCGCGTCAGAGTAACTGGGCGTTCTCGAAGCCGGTGGTGATACTGGATGTCTTTTGGAACTTGGTGTTTGTGATTAGTGGTATTATCGTTTTAGGGTTGAGCGTTGAGGAGAAGCCTTTGGTGCCTTTGAGACTGTGGATTTGTGGGTACTTGCTTCAAGGTGTTTTTCACTGTGTGCGTGTGATTCTTAAGTACAGACGATACATGCAAGCCCAAGCCCAAGCACAAGCACGTTCTGCGTCTGAAGAACAGCATCAGTATGGGATCTCTTGGGAAAGAGGTTTAGATTTTAATTCTAGTTCTGGGAGTGATATTGGTGATTCTGCTGACGAACGGGATCAAGAAGGATATAGCATCAGAAAGCGCTTGGAATCTGCAAATACAATGTTTTCATTCATATGGTGGCTTCTTGGGTTTTATTGGATTACCACTGGTGGCCAGAGCTTGACCCAAGATGCTCCTCAGCTTTACTGGCTCTGTATCACCTTCCTTGCCATCGACATTGTGATTGTTTTGATCTGTGTGGTTGTGGCATGCCTTGTTAGTATTGCTGTTTGCTGCTGTCTTCCATGCATACTTGCATTTTTGTCAGTGGTGACGGATAAGGAAGGGGCAACTGTGGAAGAAATCAATCGGTTGCCGAAGTACAAGTTCAGGAGCCCAGATGAATTTAATGCTGATGATGATGGTGATGCCCAAGCTTCCTGTTGTAAAGGGATAATGACAGAATGTGACAGCAATACGCCTGCAGAACATGCTCTTTCCAAGGAAGACGCAGAGTGCTGCATCTGCCTGTGTGCGTATGAGGATGGAGCAGAGCTGAGAGAACTTCCGTGCAGCCACCATTTTCACGCGGACTGCATCGACAAGTGGCTGATCATCAACGCTAACTGCCCTCTCTGCAAGTTCAATGTTCATACCGGAAACCATTCTCAAGTTTGA 1155 0.4961 MLSTASLPAALPDSAADSSPLLRYSVSDQLLRGTSGPLRRATQFFRHASGRRMMLREPSVRVRENAAEQLEARQSNWAFSKPVVILDVFWNLVFVISGIIVLGLSVEEKPLVPLRLWICGYLLQGVFHCVRVILKYRRYMQAQAQAQARSASEEQHQYGISWERGLDFNSSSGSDIGDSADERDQEGYSIRKRLESANTMFSFIWWLLGFYWITTGGQSLTQDAPQLYWLCITFLAIDIVIVLICVVVACLVSIAVCCCLPCILAFLSVVTDKEGATVEEINRLPKYKFRSPDEFNADDDGDAQASCCKGIMTECDSNTPAEHALSKEDAECCICLCAYEDGAELRELPCSHHFHADCIDKWLIINANCPLCKFNVHTGNHSQV 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g2112 384 SMART ring_2 332 372 IPR001841 -
Acco09g2112 384 Pfam Ring finger domain 331 373 IPR001841 -
Acco09g2112 384 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 311 379 IPR013083 -
Acco09g2112 384 ProSiteProfiles Zinc finger RING-type profile. 332 373 IPR001841 -
Acco09g2112 384 SUPERFAMILY RING/U-box 324 378 - -
Acco09g2112 384 PANTHER TARGET OF ERK KINASE MPK-1 49 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g2112 Acco-ChrAcco09 38107084 38109914 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g2112 12 383 C3H Transcription Factor Family AT1G68070 43.236 5.43e-102 303