Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g2100 ATGATTACGTCTCGTCGTCCAGGGTGTTTGATCAAATCGGATTCACTTTTATTTAATCCTCCAAGAAATGGTTCTACCCTTTGGGAAATTGGAGTTGCCCATCGCACAGCTGCAGAATTCTATATCCCAGACCCTAACCCTAAACTCATCAACAAGTTATACAGTGAACAACCTAAAGACATGTATGATCGAGACTGGTTTTACGCTCATGTTACAAGTTATACTTTACCATTAACCCTAGCATCAGCCCCTCATTCTCAATTGCAGGTTTGGGTGAATGAGAAAGGTGATAATATTCCTCCACTATTTGAAAGAGTAGATTTGGGAGGAGATAATGCAACAGCAAGGCATGGAATCCATGGATTAAATTGGATGTTCAGTATTGATGTTCCAAGTGTTCGTTTAGTGAAAGGATCAAATAGTCATATTCGTCTAGAAAGACCTCCAACTCCAAAGCCTTGA 462 0.4004 MITSRRPGCLIKSDSLLFNPPRNGSTLWEIGVAHRTAAEFYIPDPNPKLINKLYSEQPKDMYDRDWFYAHVTSYTLPLTLASAPHSQLQVWVNEKGDNIPPLFERVDLGGDNATARHGIHGLNWMFSIDVPSVRLVKGSNSHIRLERPPTPKP 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g2100 153 Pfam Polysaccharide lyase family 4, domain III 72 141 IPR029411 -
Acco09g2100 153 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 6 62 - -
Acco09g2100 153 SUPERFAMILY Galactose-binding domain-like 23 141 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g2100 Acco-ChrAcco09 37992378 37993549 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g2100 8 153 Polysaccharide Lyase AT1G09890 38.889 4.45e-37 132