Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Acco09g2063 | ATGAACAATAGAGCTAGATATCCACCTGGGATTGGCGTAGGTCGAGGGGGAGGTATGAACTCGAACCCTGGGTTTCAACCGCGACCCCCACAGCAACAGTATGTGCAAAGGCATTTAGCACCGAATCAACAGCAGTATCAACATCAGTATCAGCAGTTTCAACAGCAACATCAGCAATTACAACAGCAGCAGCAACAACAACAATGGCTTAGAAGAACGCAATTAAGTGGCACTGATTCTAATGTAGTTGACGAGGTCGAGAAGACTGTGCAGTCTGAAGCCGTTGATTCAAGTTCTCAAGATTGGAAGGCAAGATTAAAGATACCAGCACCTGATACTCGCTATAGGACTGAGGATGTGACAGCAACTAAGGGAAATGAATTTGAAGATTACTTTTTGAAGCGTGAACTGCTTATGGGAATATATGAGAAGGGTTTTGAAAGGCCTTCTCCTATTCAGGAAGAAAGTATCCCAATTGCTCTTACTGGTAGTGATATTCTTGCTAGAGCAAAAAATGGAACGGGAAAAACAGCTGCCTTTTGCATTCCTGCTTTAGAAAAAATTGATCAGGATAACAATGTTATTCAAGTTGTTATACTGGTCCCAACACGTGAATTGGCTTTGCAAACATCACAAGTGTGTAAAGAGCTGGGAAAGCATCTGAAAATTCAAGTCATGGTTACGACGGGAGGTACCAGCCTGAAAGATGATATCATGCGATTATATCAACCTGTTCATTTACTTGTTGGAACCCCAGGAAGAATATTAGATCTTGCGAAGAAGGGTGTCTGCATTTTGAAAGACTGTAATATGCTTGTTATGGATGAGGCTGATAAACTTTTGTCACCGGAGTTCCAACCTTCAATAGAGCAATTGATTCATTTCCTGCCTCCAAACCGTCAAGTCCTGATGTTTTCAGCTACTTTTCCTGTTACTGTAAAGGACTTCAAAGATAGATTTCTTCATAAACCATATATCATTAACCTTATGGATGAGTTAACTCTGAAAGGTATCACACAATTTTATGCATTCGTGGAAGAGAGACAGAAAGTCCACTGCCTCAATACACTTTTCTCTAAGCTGCAAATAAATCAGTCAATTATATTCTGCAATTCGGTGAATCGGGTTGAGCTCCTTGCCAAGAAAATTACAGAACTAGGCTATTCATGCTTCTACATCCATGCAAAGATGCTGCAAGATCATCGTAACAGAGTATTTCATGACTTCCGCAATGGTGCTTGTAGAAATCTTGTTTGTACTGATCTTTTTACCAGGGGAATAGACATTCAAGCAGTTAATGTGGTCATTAATTTTGATTTTCCTAAGAATTCAGAAACTTATCTGCACCGGGTTGGCCGTTCAGGAAGGTTTGGGCACCTTGGTCTTGCAGTGAACTTGATCACCTATGAGGATCGCTTTAATTTATATAGGATCGAGCAAGAACTTGGCACTGAAATAAAGCAAATTCCACCACATATTGATCAGGCAATTTATTGCCGGTGA | 1503 | 0.4059 | MNNRARYPPGIGVGRGGGMNSNPGFQPRPPQQQYVQRHLAPNQQQYQHQYQQFQQQHQQLQQQQQQQQWLRRTQLSGTDSNVVDEVEKTVQSEAVDSSSQDWKARLKIPAPDTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCNMLVMDEADKLLSPEFQPSIEQLIHFLPPNRQVLMFSATFPVTVKDFKDRFLHKPYIINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCR | 500 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Acco09g2063 | 500 | Gene3D | - | 331 | 500 | IPR027417 | - | |
Acco09g2063 | 500 | Gene3D | - | 82 | 330 | IPR027417 | - | |
Acco09g2063 | 500 | Pfam | DEAD/DEAH box helicase | 151 | 315 | IPR011545 | GO:0003676|GO:0005524 | |
Acco09g2063 | 500 | SMART | ultradead3 | 145 | 341 | IPR014001 | - | |
Acco09g2063 | 500 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 196 | 480 | IPR027417 | - | |
Acco09g2063 | 500 | CDD | DEADc_DDX6 | 128 | 328 | - | - | |
Acco09g2063 | 500 | SMART | helicmild6 | 377 | 458 | IPR001650 | - | |
Acco09g2063 | 500 | FunFam | ATP-dependent RNA helicase DDX6 | 107 | 330 | - | - | |
Acco09g2063 | 500 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 337 | 497 | IPR001650 | - | |
Acco09g2063 | 500 | ProSitePatterns | DEAD-box subfamily ATP-dependent helicases signature. | 273 | 281 | IPR000629 | - | |
Acco09g2063 | 500 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Acco09g2063 | 500 | Pfam | Helicase conserved C-terminal domain | 352 | 458 | IPR001650 | - | |
Acco09g2063 | 500 | Coils | Coil | 43 | 63 | - | - | |
Acco09g2063 | 500 | PANTHER | DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 | 61 | 499 | - | - | |
Acco09g2063 | 500 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 157 | 327 | IPR014001 | - | |
Acco09g2063 | 500 | CDD | SF2_C_DEAD | 338 | 467 | - | - | |
Acco09g2063 | 500 | FunFam | ATP-dependent RNA helicase DDX6 | 331 | 500 | - | - | |
Acco09g2063 | 500 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 126 | 154 | IPR014014 | GO:0003724 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Acco09g2063 | Acco-ChrAcco09 | 37668311 | 37673435 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Acco09g2063 | 126 | 497 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 39.037 | 8.91e-97 | 296 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Acco09g2063 | 09 | 37668311 | 37673435 | Acco09g2063 | 09 | 37668311 | 37673435 | ECH |