Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g2050 ATGGATCGGGGGGACCAAATGGCGTTATCTGGGTCTGCATCTTACTATATGCAAAGGGGAATAGCTGGTTCTGCCGGACAGCCGGAGCTCCATGGTTCCCCAACTATTCACCAACTTCCCAATTCCAATCTATCATTTCAACCCAACATTGGTGGGGGTACTCTTGGATCCACGCTACCATTAGAATCTTCAGCCATTTCACCGCACGGTGTTAATGTAGGGGCTCCATCTGGAGTGCCATCTGGGGAACCTGTCAAAAGGAAGAGAGGTAGGCCTAGGAAATATGGTCCAGATGGAAATGTGTCATTGGCATTGACTCCCTTGTCATCTAATCATCCCGGAAGCGGTCATTCTGGTAGTGGAACTGTGACACAGAGCCAAAAGAGGGGTAGAGGGCGCCCACCAGGGTCTGGCAAGAAACAGCAGTTGGCTTCTCTTGGTGAATTGATGTCTGGTTCAGCTGGAATGGGATTCACTCCTCATATCATCACCATTGCTGTTGGAGAAGATATTGTGTCAAAAATAATGGCATTCTCCCAGCAAGGGCCTAGAGCCGTGTGTGTATTGTCAGCCAATGGTGCTGTTTCAAATGTGACTCTTCGTCAGCCTTCATCATTGGGTGGTTCTGTTACATATGAGGGGCGTTATGAGATATTGTGTCTGTCAGGCTCGTACTTGCTTAGTGAAAGTGGTGGCTCGCGCAATCGAACCGGTGGATTGAGTGTCTCTCTTGCTAGTCCTGAGGGTAAAATCATTGGTGGAGGAGTCTGTGGAATGCTTATTGCAGCATGTCCCGTTCAGGTGATAGTTGGGAGCTTTTTATGGGGTGTATCGAAGACCAAGAACAAGAAAAAAGATGTTGAAGAAATTCCTGTGGAGTCGGATCATCAGGCAGTTCATAATCCAGTTGCTATGAATAACATTATGGCCAATCAGAATCTCACCCAACCGTCTTCTATTGGTACATGGCCGGCATCTCGTACCATGGATATGCGCAATTCCCATGTGGACATTGATTTAATGCGTGGGTGA 1032 0.4777 MDRGDQMALSGSASYYMQRGIAGSAGQPELHGSPTIHQLPNSNLSFQPNIGGGTLGSTLPLESSAISPHGVNVGAPSGVPSGEPVKRKRGRPRKYGPDGNVSLALTPLSSNHPGSGHSGSGTVTQSQKRGRGRPPGSGKKQQLASLGELMSGSAGMGFTPHIITIAVGEDIVSKIMAFSQQGPRAVCVLSANGAVSNVTLRQPSSLGGSVTYEGRYEILCLSGSYLLSESGGSRNRTGGLSVSLASPEGKIIGGGVCGMLIAACPVQVIVGSFLWGVSKTKNKKKDVEEIPVESDHQAVHNPVAMNNIMANQNLTQPSSIGTWPASRTMDMRNSHVDIDLMRG 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g2050 343 MobiDBLite consensus disorder prediction 24 143 - -
Acco09g2050 343 FunFam AT-hook motif nuclear-localized protein 1-like 160 290 - -
Acco09g2050 343 SUPERFAMILY AF0104/ALDC/Ptd012-like 158 277 - -
Acco09g2050 343 CDD DUF296 159 273 IPR005175 -
Acco09g2050 343 MobiDBLite consensus disorder prediction 34 65 - -
Acco09g2050 343 ProSiteProfiles PPC domain profile profile. 154 297 IPR005175 -
Acco09g2050 343 Pfam Plants and Prokaryotes Conserved (PCC) domain 160 273 IPR005175 -
Acco09g2050 343 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 67 311 IPR039605 GO:0003680
Acco09g2050 343 MobiDBLite consensus disorder prediction 103 131 - -
Acco09g2050 343 Gene3D - 160 300 - -
Acco09g2050 343 SMART AT_hook_2 128 140 IPR017956 GO:0003677
Acco09g2050 343 SMART AT_hook_2 86 98 IPR017956 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g2050 Acco-ChrAcco09 37584775 37589531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g2050 1 343 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 48.913 4.29e-89 270