Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g2020 ATGCAATCTACTGGTCCCGGTGGTGGTGGACCCTGCCGGAACCCGGGAGTGGGGCCGGCAGGGCGCGCCGCATCGTCAGCTGCTTCCCAATCCTCCCCATCTTCGGCAGTGTCAACGTCTCACTTGGGGCTAGACACGTTGCAGCACCAGCAACACCAGCAGATTGGTTCTAGGCAGTCATTGCAACCGCAACTTCTTAGAAAACCTGAAGGGAATGAAACATTTTTAGCATATCAAGCAGGGCTTCAAGGGGTGTATGATACTAACAATTTCTCATCTCCCAGTCCTGTACAACTGCCACAGCAATCACGGAAATCGATTGATTTCACTCAGCATGGTCCCAGTCAGGAGGCCCAGATCAGGGGTCAAGGCATGGAGCAACAAATGCCTAATCATGCCCATCAAGCATACCTTCAAATTGCTCTGAAAGCTGCACAACAAAAGTCTGCTCTGGCAATGCAATCACAGCAGCAAACTAAAATGGGAATGTTAGGCTCTTCAACTGCAAAGGATCAAGAAATGCGTATGGGAAACTTGAAAATGCAGGAACTAATTCCCTCACAGGCAATGAACCAAGCACATTGTTCCACTCCTAGGAATTCATCTGAACAATTCTCTCGTGGGGAAAAGTGGATTGATCAAGGACAGCATCAAGCAATGGATCACAAGAGTGAGGGAAAGTCTTCAACCCAGGGACCGGCCATTGGGCACATAATGCCTGGAAACATTGTAAGACCCATGCAAGCACCAACAACTCCTCAAGGCTTCCAAAATGCTGTGAACAATCAGATGGCGGTATCTGCTCAACTGCATGCTTTGCAGGCATGGGCACATGAATGTAACATTGATCTATCGCATCCGGCAAATGCTAACTTAATGGCACAACTCATTCCTATGATGCACGCAAAGATGGTCTCACAACAAAAGCCAAATGAGAATAATGTTGCTCCTCAATCATCAGCTGTCCCTGTTTCAAAACAGCAAGTTACTTCTCCAATGGAGAACCCAGCTCATGCTAATACATCAAGTGACTTGTCTGGGAAGTCTGGATGTGCAAAAGCCAGGCAGACTGTTCCTCCCAGCCACTTCGTTCCACCAAAAAATACTGGTATAGCCAGTAGTGGCAGTGACGTGGCAGTGCAACAAATTAACATTCATGGCAGAGAGTCTCAAGCATCTCTGAGGCAGCCTGGTGCTGTTGGAAATGGATTGCCTCCTATGCATCCCCAACAGTTTTCTGCTCATATGAATCATGTTGCAGATCATCCTTCGAATGCCAAAAAATCACTACCAGGACCAGATTTACCACAAGTTCCATTCATGAGGCAGTTAAACCAATCTTCTGCTCAGACTACTGGTTCCACAAATGAAGGGACTTCAGCAAATAATGTCAAATCCCTTGGGACGCCAACTCAGATACCTCAGCAACGACCTGGATTTACCAAACAGCAGTTGCATGTACTTAAAGCTCAGATATTAGCACTCAGGAGGCTGAAGAAAGGAGAGGGCGCACTTCCACAAGAACTTCTTCAGGCTATTGTTCCACCGCCTCTTGAGTTGCAATTGCAGCAGACAATCCATCCTGCTGGAGTACAGAATATAGAGAAATCTGCTGGCAATACCATGGCAGAACACCCAAGGCACATTGAGTCCAAAACAAAGGATATCCAATCTGTCCCTGTGATAAATGAACCAAGTTCCTCGAAGCAGGAAGCCTCTTCCAGAGATGAGAAATCCACTGCTCCAACAGTTCATATGCAAGCTATGCCAGTTGTGCCAAAGGAAACTGCTTCTGTTGGAAAAGAAGAGCAGCAATCAATGAAGTCAGACCAGGAGAATGATCGTGGAATTAACAGAACTCCTGTCAGAACAGAGTTGCCTCTAGATAGGGGAAAGGCTATCGTACCGCATGACTCAGTTCAACTCAACAAACCTGCACAAACTAGCTCTGTTACTCAACCAAAGGATATGGCATCCACAAGAAAATATCATGGGCCCCTTTTTGATTTCCCTTTTTTCACTAGGAAACCTGACTCATTTGGGTCATCTATGTTGGTGAACAACAATCATTTGTCTCTGGCCTATGATGTCAAAGATCTTCTTTATGAGGAAGGCATGGAAGTACTTACAAAGAGAAGGGCAGAAAATATAAAAAAGATTGAAGGTTTACTGGCAGTGAACTTAGAGAGAAAAAGAATTAGGCCAGATCTTGTTTTGAGGCTGCAAATTGAAGAGAAAAAGCTTCGTCTTTCAGATCTTCAGGCACGGCTGAGGGATGAGATTGATCAGCAGCAACAAGAGATAATGGCAATGCCAGATAGGCCATATCGTAAGTTTGTTAGACTGTGTGAGCGTCAACGTATTGAACTTGCTAGACAGGTACAAGCCTCTCAGAAAGCTCTAAGGGAGAAACAACTCAAATCTATATTTCAGTGGCGTAAGAAGCTTCTTGAGGCACATTGGGCTGTACGTGATGCTCGAATTGCCCGCAATAGGGGTGTGGGCAAATATCACGAGAGAATGTTGAGGGAATTCTCAAAGCGTAAAGATGATGATAGGAACAAAAGGATGGAAGCCTTGAAAAATAATGATGTTGACCGATACAGGGAGATGTTGTTAGAGCAGCAGACTAGCCTCTCTGGTGATGCTGCAGAGAGATATGCTGTGCTTTCATCCTTCTTAACTCAGACTGAGGACTATTTACAAAAATTGGGAAGTAAAATAACAGCTGCCAAAAGTCAGCAGGAAGTGGAGGAGGCTGCAAGAATCGCTGCAGCTGCAGCACGATTGCAGGGTCTTTCTGAAGAAGAAGTCAGAGCAGCTGCAGCTTGTGCTGGGGAGGAAGTGATGATTAGAAATCGTTTTATGGAGATGAATGCTCCTAAAGACAGTTCATCTGTCAGCAAGTATTACAGCCTTGCTCATGCCGTGAATGAAAAGGTCATAAGGCAGCCATCTATGTTACGCGCTGGAACCTTGAGAGATTATCAGCTTGTTGGCTTGCAGTGGATGCTTTCATTGTATAACAACAAGTTAAATGGAATTTTAGCAGATGAGATGGGTCTTGGTAAAACTGTGCAGGTTATGGCCTTGATTGCCTACTTGATGGAATTTAAAGGAAATTACGGCCCGCATCTTATAATTGTTCCAAATGCAGTTCTGGTTAACTGGAAGAGTGAGTTGTATAATTGGTTACCCTCTGTGTCATGCATTTTTTATGTTGGAGGGAAGGACCAACGGTCAAAATTATTTTCTCAAGAGGTTTCTGCCATGAAATTTAATGTCCTTGTGACAACTTATGAGTTCATCATGTATGACCGGTCCAAATTGTCAAAAATTGATTGGAAGTATATCATAATCGATGAAGCACAAAGAATGAAGGATAGGGATTCAGTTCTAGCTCGTGATCTTGATAGATACCGTTGTCAGAGACGTCTTCTTCTGACAGGAACACCATTGCAGAATGATCTGAAGGAACTCTGGTCACTTTTAAATTTACTTCTTCCTGAGGTTTTTGATAATCGAAAAGCATTTCATGATTGGTTCTCAAAACCTTTTCAAAAGGAAGATCCTACTCAAATTGTAGAAGATGATTGGCTTGAGACGGAAAAGAAAGTTATCATTATTCATCGACTCCATCAGATTCTTGAGCCTTTCATGCTCAGGCGTCGTGTTGAAGATGTTGAAGGCTCATTACCACCAAAGGTCTCCAAAGTTTTACGATGTAGAATGTCAGCTATTCAGAGTGCCATTTATGACTGGATCAAATTCACTGGTACCCTTCGGCTTGATCCTGAGGATGAGAAGCTTAGAGTTCAAAAGAATCCACTTTACCAGGTGAAGCAGTATAAAACTTTAAATAATAGATGCATGGAGCTGCGCAAGACCTGCAATCATCCATTGCTTAATTACCCATACTTCCATGACCTCTCCAAAGATTTCCTTCTAAAATCTTGTGGGAAATTGTGGATCCTTGATAGGATCCTTATTAAACTGCATCGAACTGGACATCGAGTTCTGCTGTTTAGTACCATGACAAAACTTCTAGACATTATAGAAGAATACCTGCAGTGGCGACGGCTTGTTTATAGAAGAATTGATGGCACAACTAGTTTGGAAGACCGTGAATCAGCTATAGTGGACTTCAATAGCCCAGGTTCAGACTGTTTCATCTTCTTGCTTAGCATTAGAGCTGCTGGGAGAGGCCTTAATCTTCAGTCTGCAGACACAGTCATCATATATGATCCTGATCCAAACCCAAAAAATGAGGAGCAGGCAGTTGCGAGGGCTCATCGCATTGGACAGTCTAGAGAAGTTAGGGTTATCTACATGGAAGCTGTTGTTGACCAAATTCCTAGCCATCAAAAAGAGGATGAACATAGAAGTGGGGGCATTGTCAATTCAGAGGATGAACTTGCAGGCAAGGATCGTTATATGGGATCCATTGAGAGCCTCATTAGGAACAATATTCAACAATACAAGATTGATATGGCTGATGAGGTCATCAATGCTGGACGTTTTGATCAAAGAACTACACATGAAGAGAGACGTATGACTTTGGAGACATTATTACATGATGAAGAAAGGTATCAAAAAACTGTCCTTGATGTTCCCTCACTACAGGAGGTGAATCGCATGATTGCCAGGAGTGAAGAAGAACTCGATCTGTTTGATCAAATGGATGAAGAACTAGATTGGAGTGAGGAGATGACACGGTATGATCAGGTGCCTAAGTGGCTTCGAGCCAGTACAAGAGAAGTCAATGTCACTATTGCTGCGTTATCAAAAAGACCTTCAAAGAACACTTTCTTGAGTGGTAGTGTCGCTGTGGAATCCAGTGAAATGGGTTCTGATGCTGCAAAAACTGAAAGGAGAAGAGGCCGACCCAAGGGGAAAAAACATCCTAGTTATAAAGAGTTAGAAGATGAAAATGGAGAATCCTCTGAAGCAAGTTCTGAAGGAAGAAATGGATATTCTGCGAATGAAGGGGAAATAGGAGAATTTGAAGATGATGGGTATAGTGGTGATGATGGAGCTCAACTAAATAATAAAGATCAAATGGATGATGGTCCACTTTGTGATGCAGGGTATGAATTTCCTTGTTCCTTGGAAAGCATGAGAAACAGTCATATGGTTGAAGAAGCTGCTTCCTCAGGATCATCCTCAGACAATCAAAGATTGACAGAGACTATATTTCCTTCAGTTCCCCCACAGAAATTTGGTTCCCTCTCTGCATTAGATTCTAGGCCAAGTTCCATTTCCAAAAGGGTGGCAGATGACTTAGAGGAAGGGGAAATTGCAGTATCTGGTGATTCTCACATGGATCACCAGCAATCTGGCAGTTGGATTCATGATCGAGATGAAGGAGAAGATGAACAAGTTTTGCAGCCCAAATTTAGACGTAAACGCAGTCACCGTGTTCGACCTCGTCATGCTACGGACAGGGTTGACGAAAAGTCTAGCAGTGAGATGACCTCTCATCAACGTGGAGAATCAGCTTATTTGGCTGTTCAAGCAGACCGTAAATATTGTGCACCATCACGGACTGACCCAGATGTAAAATCACGTGGAGAATTTAATGCTGCCTTGCATGATCAGAATGAGTCATTGATAAAAAATAAGCGAAGTTTGCCTTCAAAGAGAGTAACTTATAAATTGCGTGGTTCACCTAAATCTGGTAGATTGAATTGTATTTCTGCCCCTTCAGAGGATGGTGGTGAACAACTCAGAGAGAAGTGGGAGGGCAAGCCTATCAATTCGAGTGGGCCTTCAGCTATTGGTGCTAAAATGTCTGAAATAGTCCAGAGAAAGTGCAAGAATGTAATTAGCAAGTTTCAAAGGAGAATAGATAAGGAAGGTCATCAAATTGTACCTTTGCTTACTGACTTGTGGAAGAAGAATTCTGGACACACTGGTGGATGTGGGAATAATTGGTTGGACATACAGAAGATTGATCAGCGAATTGATAGGTTTGAATATAATGGAGTATTGGAGCTTGTGTGTGATGTGCAGTTCATGTTGAAGTGTGCGATGGATTTTTATGGGTTCTCACATGAGGTAAGATCTGAAGCAAGGAAGGTCCATGATCTCTTCTTTGATATCTTGGAAGTTGCATTTCCTGATACGGACTTCCAAGGGCCAAGAATTGCACTTTCTTTTGCTGCACCCGCTTCCGTCAGTACTCTAACATCCCCGAGGCACTTGGCTGGGAGCCAAAGTAGAAGACACAAGATGATAAATGAGGTGGAAAATGATCCAAGCCCTTCACTGAAGCAACTGCATCGGGGTTTTATTCCTAGCGGCGAAAGCACCAGGATCAGAGTGCAGCTGCCACCGAAGGATTCAAGAACTGGAACAGTTTCTGGCAGTGCAAGAGAGCAAATTCAGCAGGATGATTCTCTGATTCTCACTCATCCAGGTGAACTGGTAGTATGCAAAAAGAGAAGAAATGAGAGGGACAAGTCCACTGGGAAGACTAGGGGTGGCTCAGCCGGACCTGTTTCACCGCCTAGCTCTGGTCCTGCTATAAGAAGTCCAGGACCGAGTTCAGGTTCAAAGGATGCTAGACTAGGTCAACAGCCTGCTCAAGGGTGGACGCGCCAGTCATCTCAACAACCAAACGGGTCTGACGGTTGGGCGAATCCTGTGAAGCGGTTGAGGACAGGTAAAAGGAAGCGCCATCAATAG 6687 0.4388 MQSTGPGGGGPCRNPGVGPAGRAASSAASQSSPSSAVSTSHLGLDTLQHQQHQQIGSRQSLQPQLLRKPEGNETFLAYQAGLQGVYDTNNFSSPSPVQLPQQSRKSIDFTQHGPSQEAQIRGQGMEQQMPNHAHQAYLQIALKAAQQKSALAMQSQQQTKMGMLGSSTAKDQEMRMGNLKMQELIPSQAMNQAHCSTPRNSSEQFSRGEKWIDQGQHQAMDHKSEGKSSTQGPAIGHIMPGNIVRPMQAPTTPQGFQNAVNNQMAVSAQLHALQAWAHECNIDLSHPANANLMAQLIPMMHAKMVSQQKPNENNVAPQSSAVPVSKQQVTSPMENPAHANTSSDLSGKSGCAKARQTVPPSHFVPPKNTGIASSGSDVAVQQINIHGRESQASLRQPGAVGNGLPPMHPQQFSAHMNHVADHPSNAKKSLPGPDLPQVPFMRQLNQSSAQTTGSTNEGTSANNVKSLGTPTQIPQQRPGFTKQQLHVLKAQILALRRLKKGEGALPQELLQAIVPPPLELQLQQTIHPAGVQNIEKSAGNTMAEHPRHIESKTKDIQSVPVINEPSSSKQEASSRDEKSTAPTVHMQAMPVVPKETASVGKEEQQSMKSDQENDRGINRTPVRTELPLDRGKAIVPHDSVQLNKPAQTSSVTQPKDMASTRKYHGPLFDFPFFTRKPDSFGSSMLVNNNHLSLAYDVKDLLYEEGMEVLTKRRAENIKKIEGLLAVNLERKRIRPDLVLRLQIEEKKLRLSDLQARLRDEIDQQQQEIMAMPDRPYRKFVRLCERQRIELARQVQASQKALREKQLKSIFQWRKKLLEAHWAVRDARIARNRGVGKYHERMLREFSKRKDDDRNKRMEALKNNDVDRYREMLLEQQTSLSGDAAERYAVLSSFLTQTEDYLQKLGSKITAAKSQQEVEEAARIAAAAARLQGLSEEEVRAAAACAGEEVMIRNRFMEMNAPKDSSSVSKYYSLAHAVNEKVIRQPSMLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELYNWLPSVSCIFYVGGKDQRSKLFSQEVSAMKFNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQRMKDRDSVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSKPFQKEDPTQIVEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSKVLRCRMSAIQSAIYDWIKFTGTLRLDPEDEKLRVQKNPLYQVKQYKTLNNRCMELRKTCNHPLLNYPYFHDLSKDFLLKSCGKLWILDRILIKLHRTGHRVLLFSTMTKLLDIIEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSPGSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQSREVRVIYMEAVVDQIPSHQKEDEHRSGGIVNSEDELAGKDRYMGSIESLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQKTVLDVPSLQEVNRMIARSEEELDLFDQMDEELDWSEEMTRYDQVPKWLRASTREVNVTIAALSKRPSKNTFLSGSVAVESSEMGSDAAKTERRRGRPKGKKHPSYKELEDENGESSEASSEGRNGYSANEGEIGEFEDDGYSGDDGAQLNNKDQMDDGPLCDAGYEFPCSLESMRNSHMVEEAASSGSSSDNQRLTETIFPSVPPQKFGSLSALDSRPSSISKRVADDLEEGEIAVSGDSHMDHQQSGSWIHDRDEGEDEQVLQPKFRRKRSHRVRPRHATDRVDEKSSSEMTSHQRGESAYLAVQADRKYCAPSRTDPDVKSRGEFNAALHDQNESLIKNKRSLPSKRVTYKLRGSPKSGRLNCISAPSEDGGEQLREKWEGKPINSSGPSAIGAKMSEIVQRKCKNVISKFQRRIDKEGHQIVPLLTDLWKKNSGHTGGCGNNWLDIQKIDQRIDRFEYNGVLELVCDVQFMLKCAMDFYGFSHEVRSEARKVHDLFFDILEVAFPDTDFQGPRIALSFAAPASVSTLTSPRHLAGSQSRRHKMINEVENDPSPSLKQLHRGFIPSGESTRIRVQLPPKDSRTGTVSGSAREQIQQDDSLILTHPGELVVCKKRRNERDKSTGKTRGGSAGPVSPPSSGPAIRSPGPSSGSKDARLGQQPAQGWTRQSSQQPNGSDGWANPVKRLRTGKRKRHQ 2228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g2020 2228 MobiDBLite consensus disorder prediction 419 477 - -
Acco09g2020 2228 Coils Coil 743 767 - -
Acco09g2020 2228 SMART ultradead3 989 1178 IPR014001 -
Acco09g2020 2228 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1005 1170 IPR014001 -
Acco09g2020 2228 MobiDBLite consensus disorder prediction 2114 2134 - -
Acco09g2020 2228 MobiDBLite consensus disorder prediction 2185 2211 - -
Acco09g2020 2228 FunFam ATP-dependent helicase BRM 1233 1443 - -
Acco09g2020 2228 ProSiteProfiles QLQ domain profile. 479 515 IPR014978 GO:0005524|GO:0005634|GO:0006355
Acco09g2020 2228 SUPERFAMILY Bromodomain 1980 2041 IPR036427 GO:0005515
Acco09g2020 2228 SMART helicmild6 1350 1434 IPR001650 -
Acco09g2020 2228 MobiDBLite consensus disorder prediction 1778 1798 - -
Acco09g2020 2228 Pfam QLQ 480 513 IPR014978 GO:0005524|GO:0005634|GO:0006355
Acco09g2020 2228 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1227 1564 IPR027417 -
Acco09g2020 2228 MobiDBLite consensus disorder prediction 1810 1825 - -
Acco09g2020 2228 Pfam SNF2-related domain 996 1300 IPR000330 GO:0005524|GO:0140658
Acco09g2020 2228 MobiDBLite consensus disorder prediction 2142 2158 - -
Acco09g2020 2228 SMART bromo_6 1931 2040 IPR001487 GO:0005515
Acco09g2020 2228 MobiDBLite consensus disorder prediction 1610 1689 - -
Acco09g2020 2228 MobiDBLite consensus disorder prediction 1634 1649 - -
Acco09g2020 2228 MobiDBLite consensus disorder prediction 306 367 - -
Acco09g2020 2228 Gene3D - 1233 1442 IPR027417 -
Acco09g2020 2228 FunFam ATP-dependent helicase BRM 984 1232 - -
Acco09g2020 2228 PANTHER SNF2/RAD54 HELICASE FAMILY 739 1789 - -
Acco09g2020 2228 CDD SF2_C_SNF 1319 1444 - -
Acco09g2020 2228 MobiDBLite consensus disorder prediction 540 618 - -
Acco09g2020 2228 MobiDBLite consensus disorder prediction 1732 1752 - -
Acco09g2020 2228 Coils Coil 1540 1560 - -
Acco09g2020 2228 MobiDBLite consensus disorder prediction 2082 2228 - -
Acco09g2020 2228 Gene3D - 1929 2049 IPR036427 GO:0005515
Acco09g2020 2228 Gene3D - 984 1232 IPR038718 -
Acco09g2020 2228 MobiDBLite consensus disorder prediction 1766 1830 - -
Acco09g2020 2228 Gene3D - 795 868 - -
Acco09g2020 2228 MobiDBLite consensus disorder prediction 306 350 - -
Acco09g2020 2228 MobiDBLite consensus disorder prediction 440 477 - -
Acco09g2020 2228 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1324 1501 IPR001650 -
Acco09g2020 2228 Pfam Helicase conserved C-terminal domain 1323 1434 IPR001650 -
Acco09g2020 2228 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 974 1223 IPR027417 -
Acco09g2020 2228 MobiDBLite consensus disorder prediction 24 40 - -
Acco09g2020 2228 SMART QLQ_2 478 515 IPR014978 GO:0005524|GO:0005634|GO:0006355
Acco09g2020 2228 MobiDBLite consensus disorder prediction 1 40 - -
Acco09g2020 2228 FunFam Brahma1 1929 2050 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g2020 Acco-ChrAcco09 37313403 37324755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g2020 1014 1459 RAD5 or RAD16-like Gene Family AT1G02670 26.306 4.33e-30 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Acco09g2020 SNF2_N 4e-65 CL0023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g2020 09 37313403 37324755 Acco09g2020 09 37313403 37324755 ECH