Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g2018 ATGCTTGGTAATAGGAAATCAGTGGATTTGTATAAGCTCTTCAAGGTTGTTAAGGAGAACGGTGGGTATGACGCAGTCTCCAAAAACTGTTTATGGGATCTGGTGGGTGAACAATCTGGGTTGGGTACGAGCATTGGTTCATTTGTGCAACTGATTTACAATAAGTACTTGATTACTTTAGAGATATGCCTAAAGCAAGCTGCTGATAGTAAGGTCTCTGACTGTAGTCTGGAGTTTAACAGAGTTGATTTTGGCAGGCATTTGATGGAGTTGCACGCAGAATTTGAGGGGTCCTCATCGGATTGTACTGATGAAGAGTTGGGAGATGAGATGTGTCGACATTCTGAGTTTAAAACTCAATATAAACGCCAGGATGGTGAGGTGTTGTTCGATGCTAAGGGAGTGAAGAGCAGGTCTGCAGGGGCAAAAAAAGTTCGGAATGGAGGATTGTTTGATTTGAATATACCAGGGTTTGAGTTGAATGAACTCCCAACAACAATTGAGTTGAATGAACTCAGTCCTGGAAATTTGTGCGTTAAGAGTGAGGTAAACAAAATGCCCATATTATCGGATGGAGGCAAGAGATGTTCTGATGATGATGATGATGATGATGTTTTGATATTGGAACCATCTGATGTAAATGAAGAGAGCTTCAGTCGTAAAAGGAAGAGGGAGTCTATGCAGGGAATGCTAAGCTGGTTGACTGGCATTGCAAAGAATCCTTGTGATCCTGTTGTTGATTCGATACCTGAAAAATCAAAGTGGAGGTCTCACAGCAAAGAGAAGGTCTGGAAGCAGGCTTTGTTGTTTCGTGAGGCTGTTTTTCTGAAGCAACATGGTGAGTCAAGCAGCGAACAACTGAACTTGCAGAGGCAAAAAATGCATCCTTCCATGTATGAAGATCAGCTTGAGGCAACGTACAATTTTAGGGAGAGGGGTAAATGTACCAAGAAGCCTTTATTTGAAAAATCTAAGTCTGTAAGAGTCTCTTCAGATTCATCCATGGAAACCAAGGCTAATCTGGAGAGAACTTCAAGTCCTCACAATGAAGATTCTGCTGAGAAAAATCTGCCTGATTCCTCTGCTTCACCGTCAGATCTTGACAAATGCAGTGCAGTTCCCATCCCTCTGGGGCCAATTCATCAAGCTAAAGTACCAGAATGGACTGGCATGACTTCTGAAAGTGATTCCAAGTGGTTGGGGACCCGAATATGGCCTTCAGAGAAAGTGAATTTTAGACTCCTGATTGAGAGGGATCCCATTGGCAAGGGAAGACAAGATTCATGTGGCTGCCAAGTACCAGGTTCTGTTGAATGTGTCCGATTTCACGTCGCTGAGAAAAGGGCTAAGGTGAAGCTGGAATTAGGTGTGGTCTTTTACCTGTGGAATTTAGACAAGGTAGGTGAAGATGTTAGGCAGTCGTGGACAGTGGATGAAGAGAAGAAGTTTGAGGATGTGGTGCGATCAAATCCTCCATCACTAGAGAGATACTATTGGGATCATATTTTTAAATCATTTCCTAAGAAGACCAGGGAAGATTTGGTTAGTTACTATTTCAATGTCTTTCTTCTGCAGCGCCGAGGATATCAGAACAGGAATACTCCAAATGAAATTGATAGTGATGATGAAGAATCAGAATTTGGACCTTTGAGGAATGTTTTTGGACAGCAAGCACAGAAGCCAACCAGTTCCATCTTACTAACCCCCAAAAAATCTCAGATAAAGAACAAATAG 1734 0.4227 MLGNRKSVDLYKLFKVVKENGGYDAVSKNCLWDLVGEQSGLGTSIGSFVQLIYNKYLITLEICLKQAADSKVSDCSLEFNRVDFGRHLMELHAEFEGSSSDCTDEELGDEMCRHSEFKTQYKRQDGEVLFDAKGVKSRSAGAKKVRNGGLFDLNIPGFELNELPTTIELNELSPGNLCVKSEVNKMPILSDGGKRCSDDDDDDDVLILEPSDVNEESFSRKRKRESMQGMLSWLTGIAKNPCDPVVDSIPEKSKWRSHSKEKVWKQALLFREAVFLKQHGESSSEQLNLQRQKMHPSMYEDQLEATYNFRERGKCTKKPLFEKSKSVRVSSDSSMETKANLERTSSPHNEDSAEKNLPDSSASPSDLDKCSAVPIPLGPIHQAKVPEWTGMTSESDSKWLGTRIWPSEKVNFRLLIERDPIGKGRQDSCGCQVPGSVECVRFHVAEKRAKVKLELGVVFYLWNLDKVGEDVRQSWTVDEEKKFEDVVRSNPPSLERYYWDHIFKSFPKKTREDLVSYYFNVFLLQRRGYQNRNTPNEIDSDDEESEFGPLRNVFGQQAQKPTSSILLTPKKSQIKNK 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g2018 577 MobiDBLite consensus disorder prediction 533 577 - -
Acco09g2018 577 Pfam ARID/BRIGHT DNA binding domain 4 60 IPR001606 GO:0003677
Acco09g2018 577 CDD ARID 4 61 - -
Acco09g2018 577 Gene3D - 1 76 IPR036431 GO:0003677
Acco09g2018 577 SMART ELM2_2 375 426 IPR000949 -
Acco09g2018 577 MobiDBLite consensus disorder prediction 326 368 - -
Acco09g2018 577 SMART bright_3 2 66 IPR001606 GO:0003677
Acco09g2018 577 MobiDBLite consensus disorder prediction 555 577 - -
Acco09g2018 577 SUPERFAMILY ARID-like 4 74 IPR036431 GO:0003677
Acco09g2018 577 CDD SANT 474 522 IPR001005 -
Acco09g2018 577 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 1 572 - -
Acco09g2018 577 ProSiteProfiles ARID domain profile. 1 65 IPR001606 GO:0003677
Acco09g2018 577 Pfam Myb-like DNA-binding domain 472 521 IPR001005 -
Acco09g2018 577 SMART sant 471 524 IPR001005 -
Acco09g2018 577 MobiDBLite consensus disorder prediction 326 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g2018 Acco-ChrAcco09 37285325 37289443 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Acco09g2018 ARID 6e-08 CL0123