Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g2017 ATGTCGGTTCTCACTTCTCCTTCTTCCTCTTCCTCCGTCATACCCTTCTCTCTCTTCTTCCTCTCCCTCCTTGCTTTTTCCTCTTCTCAGCCAAACTATTCTGGCAGAGGGAGGAAGCTGCAAGCCAACCGTGTTCTCTTGAGAGCAAACGAGACCTTGGTCAGTGAGAATGGCACATTCGAGCTTGGCTTCTTCAACTTCAATGGCGGACAGCCCAATTATTACTTGGCCGTTCGCTATGCCTCGATTTCACTTCCCACGTACGTCTGGGTGGCCAATCGCGAAAAACCCAGCAAAAATCTCGCCGATTCGACGCTGGAAATCACTGAAACTGGCCTCCTCCTCGTCAAAGATTCACCAACCTCGATCCTTTGGCAGAGTACGAATTTAGGAACTTCAGAAGGAGTGGAATCAAAGCTTTTAGAAAGTGGGAATTTGGTTCTGCTCACTCGGGAAGGCTCGGTTTTGTGGCAGAGCTTCGATTTCCCCACGGACGCTTGGCTTCCGGATATGAATCTGACCCGGAACCGATCCTTGGTGTCGTGGCGGAGCCTCACGGACCCGTCGCCGGGACTCTATTCTCTGCGGCTGAAACCGCCGGGCTACGGTGAGTTCGAGCTCCTCTTCAATAACTCCAAATCTTATTGGACGACCGGAAGGTGGACCGGCGGCTCGTTCCTCAACATTCCGGAAATGATGATTCCATATCTCTATCAATTCCACTTCGCGAATCCGTTTACGCCAACAGCGTCGTTTGGATTCCGGGAGAAGCCTCTGAACGGGCTGAGCCCGCCAACGTATTTCCGGGTCGAACCGTACGGGCAGGTCCGACAGTACACGTGGTGGTCTCAGACCGGAAGCTGGAACATTTTCTGGTCAGGACCGAAAAATGTGTGTGACGTTCAAGACCAGTGTGGTAGCTTAGGAGTCTGCAAAGGCGAAACGACGCCGATGTGCGAGTGCGTCTCCAGTTACAAGCCCTTAGACGACGGTGGATGGGCTTCCAGAGATTACTCCGGTGGCTGCCGTCGGAAAGCCGATAGTCCCTGCGATAAAAATGATGGGTTCGTAGATATGGGCGTTATGAGCTTCGAAGCACCCAATGTGCAGTCGTTTCAAATCAAATCTCGAAGTAGTTGCGAGACTAACTGTTTAAGTTCATGCGATTGTATTGGCTTATCTTTCAATCAAAGAACCAGCTCCTGCCAGAACTTTTACGGCTCAATTCTGAATCTCCGTAATTCATCTTCTGAAACCTCTTTTTATGGCAATTTGTTTGTTAGGGTACAGCGAGGAGAATCTGAGAAGAAACTGAATCGGCAAACTCTGACTGGCACTATCATTGGGGCAATTGCTTTTCTAGGGTTAATAGTGGTGACATTGTTGGTATTGCTGAATCGAAGGCGGAAGAAGAAGAAACTAGAAGAAGATGGATTGATTCCTGTTCTGAATCTTAAGTTATTTTCCTACAAAGAGCTTCAGTTAGCGACTCGGGGATTCTCAGGGAAGGTAGGTCACGGTGGGTTTGGGACAGTATTTCAAGGAGAATTACCAGATTCAACAAGCGTAGCAGTGAAGCGACTTGAGAGACCAGGTGGTGGAGAAAAGGAGTTCAGAGCAGAAGTTTGCACCATAGGTAATATCCAACATATTAATCTCGTTAGACTCAGAGGCTTTTGCTCTGAAAATTCTCACAGACTTCTGGTTTACGAGTTCATGCCCAACGGCGCTCTTAGTTGTTACCTTCGCAAAGAAGGAGGGCCTAGTCTGAGTTGGGATGTTAGGTTCCGAATCGCCGTAGGAACAGCCAAAGGCATAGCTTACTTGCATGAAGAATGTCGAGACTGTATCCTTCACTGTGATATCAAACCTGAAAACATCCTGTTGGACACAGATTTCACAGCCAAAGTTTCTGATTTCGGATTAGCGAAGCTCATGGGGAGGGATTTCAGTAGGGTTTTAGCAACAATGAGAGGCACTTGGGGGTATGTAGCACCAGAGTGGATTTCTGGGGTAGCAATCACCACAAAAGCTGATGTTTACAGCTACGGGATGACATTGCTAGAGCTGATCAGTGGTCGCCGGAATGTGGAGGCGCCGCCACAATCAGGTGGCGGCGAGGAGGCCAGAGAGAAGGAGAAATGGTTCTTCCCTCCGTGGGCTGCACAACAGATAATTGAAGGGAATTGGACTGCAATAATTGACAAAAGGCTTGGGAATTCTTATAACATGGAGGAGGTAAGGAGGGTGGCTATGGTGGCTGTATGGTGCATTCAGGATGAAGAAGGAAGCAGGCCTCCGATGGGGATGGTGGTGAAGATGTTGGAAGGGTTAGTGCAAGTCAGTGTACCTCCCACGCCTAAACTGCTTCAAGCATTGGTCTCTGGCGAGTCCTTTCAGGGTGTCAAGGCAGATTCCGGCACAGGTGGCAGCAATGCTGATACAGAATCATTCACTGGCGGCGACTTTTCTTCTCCGGCAAATACGAATGTGAATGTTGTTGTACAATGA 2511 0.4902 MSVLTSPSSSSSVIPFSLFFLSLLAFSSSQPNYSGRGRKLQANRVLLRANETLVSENGTFELGFFNFNGGQPNYYLAVRYASISLPTYVWVANREKPSKNLADSTLEITETGLLLVKDSPTSILWQSTNLGTSEGVESKLLESGNLVLLTREGSVLWQSFDFPTDAWLPDMNLTRNRSLVSWRSLTDPSPGLYSLRLKPPGYGEFELLFNNSKSYWTTGRWTGGSFLNIPEMMIPYLYQFHFANPFTPTASFGFREKPLNGLSPPTYFRVEPYGQVRQYTWWSQTGSWNIFWSGPKNVCDVQDQCGSLGVCKGETTPMCECVSSYKPLDDGGWASRDYSGGCRRKADSPCDKNDGFVDMGVMSFEAPNVQSFQIKSRSSCETNCLSSCDCIGLSFNQRTSSCQNFYGSILNLRNSSSETSFYGNLFVRVQRGESEKKLNRQTLTGTIIGAIAFLGLIVVTLLVLLNRRRKKKKLEEDGLIPVLNLKLFSYKELQLATRGFSGKVGHGGFGTVFQGELPDSTSVAVKRLERPGGGEKEFRAEVCTIGNIQHINLVRLRGFCSENSHRLLVYEFMPNGALSCYLRKEGGPSLSWDVRFRIAVGTAKGIAYLHEECRDCILHCDIKPENILLDTDFTAKVSDFGLAKLMGRDFSRVLATMRGTWGYVAPEWISGVAITTKADVYSYGMTLLELISGRRNVEAPPQSGGGEEAREKEKWFFPPWAAQQIIEGNWTAIIDKRLGNSYNMEEVRRVAMVAVWCIQDEEGSRPPMGMVVKMLEGLVQVSVPPTPKLLQALVSGESFQGVKADSGTGGSNADTESFTGGDFSSPANTNVNVVVQ 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g2017 836 Gene3D Phosphorylase Kinase; domain 1 463 572 - -
Acco09g2017 836 CDD STKc_IRAK 504 778 - -
Acco09g2017 836 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 221 IPR036426 -
Acco09g2017 836 Gene3D Transferase(Phosphotransferase) domain 1 573 783 - -
Acco09g2017 836 ProSiteProfiles PAN/Apple domain profile. 350 426 IPR003609 -
Acco09g2017 836 PIRSF SRK 8 826 IPR024171 GO:0004674
Acco09g2017 836 FunFam Receptor-like protein kinase 4 461 572 - -
Acco09g2017 836 ProSiteProfiles Bulb-type lectin domain profile. 38 161 IPR001480 -
Acco09g2017 836 ProSitePatterns Protein kinases ATP-binding region signature. 504 526 IPR017441 GO:0005524
Acco09g2017 836 Pfam D-mannose binding lectin 87 178 IPR001480 -
Acco09g2017 836 SMART blect_4 44 163 IPR001480 -
Acco09g2017 836 Pfam Protein kinase domain 502 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g2017 836 PANTHER OS07G0415500 PROTEIN 10 788 - -
Acco09g2017 836 ProSiteProfiles Protein kinase domain profile. 498 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g2017 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Acco09g2017 836 FunFam S-receptor-like kinase 5 573 784 - -
Acco09g2017 836 MobiDBLite consensus disorder prediction 802 824 - -
Acco09g2017 836 CDD B_lectin 44 163 IPR001480 -
Acco09g2017 836 SMART serkin_6 498 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g2017 836 SUPERFAMILY Protein kinase-like (PK-like) 482 776 IPR011009 -
Acco09g2017 836 Gene3D - 36 160 IPR036426 -
Acco09g2017 836 Pfam S-locus glycoprotein domain 216 327 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g2017 Acco-ChrAcco09 37258386 37260896 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g2017 488 785 Receptor kinase-like Gene Family AT5G20050 46.129 2.17e-79 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Acco09g2017 Pkinase 1.7e-43 CL0016