Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g2014 ATGAAAAGTCCAATGTCCCACTCACGTCGACGGAGCTCCAGCTCCGGCTACCGCACGCCCGATCACCGTCACACCTACAGTTCCACCTATGATTCCTCTGGGGTTAGCACCACCATTGACAAGTCAAACTCCTCTCGTAACCCAGTCGCGGCCGCAGCCAGGTCAGTGGCCGCGGTTTTTGTTGCGTGCTTCACCCCGCCGGACGAGAGTAACTCCAAGAGCTTCGTCGATTCTCGGGAGTTCAAAGCTTCATCTTCTTACTCTGTTGCATCCGATTCTTCGGGAGCTGGTACTCAGAGAAGGCAAGGTTCACATCGACGATTGAGTTCCAGTTCATACAAGTTAACTCAAGGAAAAGAGCCTAGATCTCTGAATTTCACCATGGGGGATATCCTCCAAGCCACAAGAAACTTCTCCCCTGCTTACAAGGTCGGTCAAGGTGGTTTTGGTACAGTTTACAAGGCAAAACTCCAGGATGGAACTGTTGTTGCAGTAAAGCGTGCCAAGAAGAGTTTATACGAGAAGCATTTGACTAGTGAGTTCCAGAGTGAGATCCAGACGTTATCACGGGTGGAGCATTTGAATTTGGTCAAGTTCTATGGATATTTGGATCAAGGAGATGAAAGAATTCTTGTTGTGGAGTATGTCCCAAATGGAACCCTTAGAGAGCATTTAGATTGCAGTCGTGGGAATATTTTGGACCTTGCTTCTCGTCTAGACATGGCCATTGATGTGGCTCATGCTATCACCTATCTTCATATGTATATAGATCATCCTATTATTCATAGAGACATTAAATCCTCCAACATTCTTATTACTGAAAATTTGAGAGCTAAGGTAGCAGACTTTGGTTTTGCTAGACAGGCACCTGACACTGATTCTGGTGTTACCCATGTATCTACCCAAGTTAGAGGAACTGCCGGCTATTTGGATCCTGAATATCTCAGAACCTATCAACTGACTGAGAAGAGTGATGTCTATTCCTTTGGTGTTTTACTTGTCGAACTTGTCACAGGTAGACGTCCCATTGAACCAAAATTTGAACTGAAGGAGCGAATAACTGCAAGATGGGCTATAAAGAAATTCATTGAGGGGAATGCCATCTCGGTGTTGGACCCAAGACTAGATCACAGTGCTGCAAATAATCTGGCTCTAGAAAAGATACTTGAACTAGCCTTGCAATGTTTGGCACCTCGTAGACAAAGCAGGCCTAGTATGAAGAAGTGTGGTGAGATCCTTTGGACCATCCGTAAAGATTACAGAGAGCTATCAGCTGCATCAGATTTTCGTTCATTTTCCTCTTCTTCCCTGGGGAGGGCATCAATAAAAGAGTGA 1335 0.4547 MKSPMSHSRRRSSSSGYRTPDHRHTYSSTYDSSGVSTTIDKSNSSRNPVAAAARSVAAVFVACFTPPDESNSKSFVDSREFKASSSYSVASDSSGAGTQRRQGSHRRLSSSSYKLTQGKEPRSLNFTMGDILQATRNFSPAYKVGQGGFGTVYKAKLQDGTVVAVKRAKKSLYEKHLTSEFQSEIQTLSRVEHLNLVKFYGYLDQGDERILVVEYVPNGTLREHLDCSRGNILDLASRLDMAIDVAHAITYLHMYIDHPIIHRDIKSSNILITENLRAKVADFGFARQAPDTDSGVTHVSTQVRGTAGYLDPEYLRTYQLTEKSDVYSFGVLLVELVTGRRPIEPKFELKERITARWAIKKFIEGNAISVLDPRLDHSAANNLALEKILELALQCLAPRRQSRPSMKKCGEILWTIRKDYRELSAASDFRSFSSSSLGRASIKE 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g2014 444 PANTHER OS01G0750732 PROTEIN 31 428 - -
Acco09g2014 444 ProSitePatterns Protein kinases ATP-binding region signature. 144 170 IPR017441 GO:0005524
Acco09g2014 444 ProSiteProfiles Protein kinase domain profile. 138 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g2014 444 MobiDBLite consensus disorder prediction 8 45 - -
Acco09g2014 444 Gene3D Transferase(Phosphotransferase) domain 1 216 433 - -
Acco09g2014 444 Pfam Protein kinase domain 142 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g2014 444 SMART serkin_6 138 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g2014 444 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 2 100 215 - -
Acco09g2014 444 SUPERFAMILY Protein kinase-like (PK-like) 120 416 IPR011009 -
Acco09g2014 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Acco09g2014 444 Gene3D Phosphorylase Kinase; domain 1 97 215 - -
Acco09g2014 444 CDD STKc_IRAK 144 407 - -
Acco09g2014 444 MobiDBLite consensus disorder prediction 87 116 - -
Acco09g2014 444 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 216 427 - -
Acco09g2014 444 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g2014 Acco-ChrAcco09 37235825 37238307 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g2014 126 417 Receptor kinase-like Gene Family AT1G30570 44.521 3.68e-72 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Acco09g2014 Pkinase 6.7e-52 CL0016