Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g2005 ATGGGCTTTCCGGTGGGATACACCGACGTCGTTTTGCCCAATCTCTTCCTCCACACTCTCTCCCTCCTCGGATTCATCCGCAACCTCATCTTCCTCCTCTTCCACTTCCTCGGCCTCTCCGATTTCCTCGAAACCGAGGTTGTCTGGTCCGAATCTCACGCTCGATTGCCCGATACCCCTCCGGTGTCGGCGCTCCTGATCCGAGAATTCCTCCCTGTCGTCAAGTTCTCCGACCTTCTCGCTGCCGCTAACTCCGCCGGCGATACGCCGGAGAGTTGTGCCGTCTGCCTCTACGAGTTTGAGTGCGAGGAGGAAATCAGGTGCTTGACGAATTGCAAACACATTTTTCACCGGCCTTGTCTCGACCGTTGGATGGATCACGATCAGAAGACTTGTCCCTTGTGTAGGACCTCCTTTGTTCCTGATGATATGCAGGATGATTTCAATCAACGGCTCTGGGCTGCGTCTGGAGTCTCTGATGTTTATGGAGACTACACTTCCCTGTGA 507 0.5444 MGFPVGYTDVVLPNLFLHTLSLLGFIRNLIFLLFHFLGLSDFLETEVVWSESHARLPDTPPVSALLIREFLPVVKFSDLLAAANSAGDTPESCAVCLYEFECEEEIRCLTNCKHIFHRPCLDRWMDHDQKTCPLCRTSFVPDDMQDDFNQRLWAASGVSDVYGDYTSL 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g2005 168 SUPERFAMILY RING/U-box 92 142 - -
Acco09g2005 168 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 56 141 IPR013083 -
Acco09g2005 168 FunFam RING-H2 finger protein ATL73 67 143 - -
Acco09g2005 168 Pfam Ring finger domain 92 136 IPR001841 -
Acco09g2005 168 ProSiteProfiles Zinc finger RING-type profile. 93 136 IPR001841 -
Acco09g2005 168 SMART ring_2 93 135 IPR001841 -
Acco09g2005 168 PANTHER RING ZINC FINGER PROTEIN-RELATED 20 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g2005 Acco-ChrAcco09 36982367 36982873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g2005 1 167 C3H Transcription Factor Family AT1G63840 52.542 1.04e-54 169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g2005 09 36982367 36982873 Acco09g2005 09 36982367 36982873 ECH