Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Acco09g2005 | ATGGGCTTTCCGGTGGGATACACCGACGTCGTTTTGCCCAATCTCTTCCTCCACACTCTCTCCCTCCTCGGATTCATCCGCAACCTCATCTTCCTCCTCTTCCACTTCCTCGGCCTCTCCGATTTCCTCGAAACCGAGGTTGTCTGGTCCGAATCTCACGCTCGATTGCCCGATACCCCTCCGGTGTCGGCGCTCCTGATCCGAGAATTCCTCCCTGTCGTCAAGTTCTCCGACCTTCTCGCTGCCGCTAACTCCGCCGGCGATACGCCGGAGAGTTGTGCCGTCTGCCTCTACGAGTTTGAGTGCGAGGAGGAAATCAGGTGCTTGACGAATTGCAAACACATTTTTCACCGGCCTTGTCTCGACCGTTGGATGGATCACGATCAGAAGACTTGTCCCTTGTGTAGGACCTCCTTTGTTCCTGATGATATGCAGGATGATTTCAATCAACGGCTCTGGGCTGCGTCTGGAGTCTCTGATGTTTATGGAGACTACACTTCCCTGTGA | 507 | 0.5444 | MGFPVGYTDVVLPNLFLHTLSLLGFIRNLIFLLFHFLGLSDFLETEVVWSESHARLPDTPPVSALLIREFLPVVKFSDLLAAANSAGDTPESCAVCLYEFECEEEIRCLTNCKHIFHRPCLDRWMDHDQKTCPLCRTSFVPDDMQDDFNQRLWAASGVSDVYGDYTSL | 168 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Acco09g2005 | 168 | SUPERFAMILY | RING/U-box | 92 | 142 | - | - | |
Acco09g2005 | 168 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 56 | 141 | IPR013083 | - | |
Acco09g2005 | 168 | FunFam | RING-H2 finger protein ATL73 | 67 | 143 | - | - | |
Acco09g2005 | 168 | Pfam | Ring finger domain | 92 | 136 | IPR001841 | - | |
Acco09g2005 | 168 | ProSiteProfiles | Zinc finger RING-type profile. | 93 | 136 | IPR001841 | - | |
Acco09g2005 | 168 | SMART | ring_2 | 93 | 135 | IPR001841 | - | |
Acco09g2005 | 168 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 20 | 156 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Acco09g2005 | Acco-ChrAcco09 | 36982367 | 36982873 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Acco09g2005 | 1 | 167 | C3H Transcription Factor Family | AT1G63840 | 52.542 | 1.04e-54 | 169 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Acco09g2005 | 09 | 36982367 | 36982873 | Acco09g2005 | 09 | 36982367 | 36982873 | ECH |