Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1988 ATGAATACCGGCGTTCCCGGTCTCAATCACCCGACGGCGGCTCCGGCCACTGCCAATACGAATCCGGATGATCCGAACAAGAAGATCCGAAAACCGTATACGATTACTAAGTCTAGAGAGAACTGGTCCGAGCTGGAGCACGACAAGTTTCTTGAAGCTCTCCAATTATTTGACCGTGATTGGAAGAAGATTGAAGCATTTGTTGGGTCAAAAACTGTTATTCAGATAAGAAGTCATGCGCAGAAGTATTTTCTAAAAGTTCAGAAGAATGGGACTAGTGAACATGTACCTCCTCCCCGGCCAAAGAGAAAAGCTGCTCACCCTTATCCACAAAAGGCCCCTAAAAATGCTGCATTGGTATCTCAAGGTACCGGACCAATGCAATCTTCATCCGCTTTTGCTGAGCCTGCATACATTTATAGGCCTGATTCATCATCTGTGCTCGGAACACCGGTTACCAGTGTGCCTTTGTCATCATGGAATTGTAATGCTATGCCACCAGTCAGTATGCCCCAAGTGGCCAAAGATGATATGGGATTGGTTGGACAAGCTGTTCCTCGTAGTTGTTGCTATAGCAGTAGTAATGAGAGCGCTCTTGGAGTCTGGCCTAATGGTAAAAGTGTAGATCAAGTGGACCAAGACAAGCCGATAACTGTAACGCCAGATTTTGCACAAATCTATAGGTTCATCGGTAGTGTGTTTGATCCAAATGGAACTGATCATCTACAGAGACTGAGAAAGATGGACCCAATAAATGTGGAAACAGTATTGTTGTTGATGAGAAACCTCTCCATCAATTTAACAAGTCCTAAGTTTAAGGATCATCGGAAGTTGCTTTCGTCGTATGATGTTGATGCAAAGACTGGTCGTATGTACAATGACCCCCTGACTAACAAATCTGAAAGTGCTGTTCTGTCTGCTTAG 924 0.4448 MNTGVPGLNHPTAAPATANTNPDDPNKKIRKPYTITKSRENWSELEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKAPKNAALVSQGTGPMQSSSAFAEPAYIYRPDSSSVLGTPVTSVPLSSWNCNAMPPVSMPQVAKDDMGLVGQAVPRSCCYSSSNESALGVWPNGKSVDQVDQDKPITVTPDFAQIYRFIGSVFDPNGTDHLQRLRKMDPINVETVLLLMRNLSINLTSPKFKDHRKLLSSYDVDAKTGRMYNDPLTNKSESAVLSA 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1988 307 CDD SANT 41 84 IPR001005 -
Acco09g1988 307 ProSiteProfiles SANT domain profile. 37 90 IPR017884 -
Acco09g1988 307 MobiDBLite consensus disorder prediction 1 32 - -
Acco09g1988 307 Pfam Myb-like DNA-binding domain 39 84 IPR001005 -
Acco09g1988 307 NCBIfam myb-like DNA-binding domain, SHAQKYF class 37 86 IPR006447 GO:0003677
Acco09g1988 307 PANTHER SWI/SNF COMPLEX-RELATED 10 268 - -
Acco09g1988 307 MobiDBLite consensus disorder prediction 88 113 - -
Acco09g1988 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 34 88 IPR017930 -
Acco09g1988 307 SUPERFAMILY Homeodomain-like 33 89 IPR009057 -
Acco09g1988 307 Gene3D - 41 89 - -
Acco09g1988 307 SMART sant 38 86 IPR001005 -
Acco09g1988 307 FunFam protein REVEILLE 6 isoform X1 41 89 - -
Acco09g1988 307 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1988 Acco-ChrAcco09 36778016 36780769 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco09g1988 Myb_DNA-binding 8.4e-10 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g1988 09 36778016 36780769 Acco09g1988 09 36778016 36780769 ECH