Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1976 ATGGGCGATTGCGATGGAGGGGCCTTTGCTGGAACCATTTGCTCAATCTGCTACGAAGTTCTCCAGCCCATCGTCGAAGACCTCCAATCCCTCAATATCTGCGGCCATGTCTTCCACGAGCTCTGTTTGCAGCAATGGTTTGAGTACTGTTCAACGGCAAAGAAATGCACTTGCCCTGTGTGCAAGCAGAGTTGTAAAGCGAGCGATGTTGCTCGTTTGTATTTCCAGTCTGTTGGAGACGTGAACGATGCTGTTCTTCCTGAAAAACCTTTTGGGTCTAAGGAGGCAAATGGCGGAGTTTCGAGTAGAGAAGTGACCATGTTGGAATTGAAAATTTCTGGGCTCAGTTCAAAATTGGAACAACAAGAGAAGAAATTGGGAGATGTTACTAATGAGCTTTGTGCTTGCAAGGAACAGGCAAAATTTGATGCAGGACTAAAAAACGAAGCTTTGAAACAAAGAGCATACATACAAAACCAGCTACTTATGAAATCAGAGGAGCTTGAAAAGTCAACTTTGAAGTGTTCGAGATTAGAAGATAGAAATATGGCACTAGCTAAAGAACTCGCAGCATTCAAATTGGTATTAGATCCGAACCTTGATGAAGATGAGGTTTTGAAGCTTGCCACGTTGGGTAATGGTGCCAACAGCAAAGATACGATTGATACATTACGAAGATCTTTGGTCATGCGGAACAGGAGTTACAAAGAATTAATGACCAAGTGCAATATTCTGGGAAGAGGGGAGGCACGTTATAGTATTAAGCTTGAGAAGGCCAAAGAGAAAATCAAGAAACTGAAGGAAAGGATACAAGAACTGGAAACAGCAGCTGAAGTAAAAGAGAATGAAATCTTAAGATCTTTGAAAGTTACAAAGAAAACAGGTTGCTTAAAGAATCTTGAAAGCAATAGCAGTTATAATCCTGATCTATTGTCAGCAGATAAAATTTCATCAAAAGAACATGGGAAGCAAATTTTGACACGCCATTCCAGAACAGATATCTCTGTGAACATCAATAATAAAGTGTTGCAATCTGCAAAGATAGACAACATTGATGGTAAGGAAAGTCGAGAAAATAAAAATGTGAATTTCAGCAAAGAAAGTTCAGCTAGGATGTCTCTTAATGGAGAGGAAAATTACATCTCACTTGATGAAGACGATTCAGAATTTACTAAAGCTTTGCCAGGATTTGGAAAATACAACTGCAAAGACCAAGGTAGTGGTGCTGCTGCTCTTAGGAAGCCCACCTCAGCAAAGCCAGAGGCAGCTTCTAGTGTAGAGAGAGAAACAGCAATGCAAGAATACAACCTGGCTGAGCCTTTAAGGGTTGACGTTAGCGATGAGTTAGGCAAAAATGCTGCTGGTACTATGTCTGAAGATGTGACATTACTAGACAATGCGAAACAAGTTCAGACCTTTATTAATATTCGAAAAGAAAATCTATATCCACTACCTCTTTCAAGTCCAGGTGATATTTGTTTTTCTGGCGGCTTACTTGGTCCTGATGGAACTAATCGATACTTGGGGAGATGGTGCAAACTAGGACAGAAAAAGGATTCAGTCACTCCAAAAGCTTCAATCAATGGTGATTTGATAGCTGTAGGGGCTGATGGTAGAGGTGGTAAAGTTAAAGTTCTGAGATCTCCAAACCAAACCTTCCAGAATTGTAAGGAGAATTCAGCAAGTTCAAAAAGGTTGAAACTTGGACCTAAAGCAAACAGCATGCAGTCCCAGGGGTGCCTGCAGATAGAACACTTCTTTGGGAGGGTCAGTCACTAA 1779 0.4103 MGDCDGGAFAGTICSICYEVLQPIVEDLQSLNICGHVFHELCLQQWFEYCSTAKKCTCPVCKQSCKASDVARLYFQSVGDVNDAVLPEKPFGSKEANGGVSSREVTMLELKISGLSSKLEQQEKKLGDVTNELCACKEQAKFDAGLKNEALKQRAYIQNQLLMKSEELEKSTLKCSRLEDRNMALAKELAAFKLVLDPNLDEDEVLKLATLGNGANSKDTIDTLRRSLVMRNRSYKELMTKCNILGRGEARYSIKLEKAKEKIKKLKERIQELETAAEVKENEILRSLKVTKKTGCLKNLESNSSYNPDLLSADKISSKEHGKQILTRHSRTDISVNINNKVLQSAKIDNIDGKESRENKNVNFSKESSARMSLNGEENYISLDEDDSEFTKALPGFGKYNCKDQGSGAAALRKPTSAKPEAASSVERETAMQEYNLAEPLRVDVSDELGKNAAGTMSEDVTLLDNAKQVQTFINIRKENLYPLPLSSPGDICFSGGLLGPDGTNRYLGRWCKLGQKKDSVTPKASINGDLIAVGADGRGGKVKVLRSPNQTFQNCKENSASSKRLKLGPKANSMQSQGCLQIEHFFGRVSH 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1976 592 Coils Coil 249 283 - -
Acco09g1976 592 MobiDBLite consensus disorder prediction 407 428 - -
Acco09g1976 592 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 10 183 IPR013083 -
Acco09g1976 592 Coils Coil 168 188 - -
Acco09g1976 592 PANTHER RING ZINC FINGER PROTEIN-RELATED 6 590 - -
Acco09g1976 592 SMART ring_2 14 61 IPR001841 -
Acco09g1976 592 SUPERFAMILY RING/U-box 12 66 - -
Acco09g1976 592 Pfam Ring finger domain 13 62 IPR001841 -
Acco09g1976 592 Coils Coil 105 132 - -
Acco09g1976 592 ProSiteProfiles Zinc finger RING-type profile. 14 62 IPR001841 -
Acco09g1976 592 CDD RING-H2 14 62 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1976 465 592 C3H Transcription Factor Family AT4G01270 42.537 1.52e-20 93.2