Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1964 ATGCCTCCGCCGGTGCCGGAACCCTCCCTCCTGGCCGCCGACGATGACAATAACTACAACTGGCAGGATGAAGCTGTGGTTACTTTCATCAACGACCTCAGCGTGGGTTCCTTGTTCACCAAGGTACTCATCCTTGTCATCGTCGTCTTCCTCGTCTACTGGCTTTGTAACTCTATTTATCGCCGCTGCCGCGGCCATGACAGCCATCAACAACGCAGCAACCATGGCGGCGACGTCCCTAACTCAACTCCTAATAATAGTAATCTCGTCGATGACCACCACTATGGCGACGAAGAGAACCTTGTCCAAAATAATGCCCACATTGAAGCCGCCATCAACTCGTGCCCGTGTTTCATGTACGGTGATAAGAAAGACGATGACCACCAGAACAACACGACATGTCCGATTTGCATGTGCGAGTATTTGGAGTCGGAGATGATGAGGACGATGCCACAATGTGGGCATTACTTTCACCTTAAATGCATTGATGAATGGCTGAGGATTAATTGGTCATGTCCTGTGTGTCGTGTCCCGCCGTTGATGCCGCGGACTACGCCGTCGTCGTAG 567 0.5168 MPPPVPEPSLLAADDDNNYNWQDEAVVTFINDLSVGSLFTKVLILVIVVFLVYWLCNSIYRRCRGHDSHQQRSNHGGDVPNSTPNNSNLVDDHHYGDEENLVQNNAHIEAAINSCPCFMYGDKKDDDHQNNTTCPICMCEYLESEMMRTMPQCGHYFHLKCIDEWLRINWSCPVCRVPPLMPRTTPSS 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1964 188 MobiDBLite consensus disorder prediction 70 94 - -
Acco09g1964 188 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 91 180 IPR013083 -
Acco09g1964 188 MobiDBLite consensus disorder prediction 74 90 - -
Acco09g1964 188 ProSiteProfiles Zinc finger RING-type profile. 134 176 IPR001841 -
Acco09g1964 188 SMART ring_2 134 175 IPR001841 -
Acco09g1964 188 PANTHER RING-H2 FINGER PROTEIN ATL67 21 187 IPR044289 GO:0016567|GO:0016740
Acco09g1964 188 Pfam Ring finger domain 133 176 IPR001841 -
Acco09g1964 188 SUPERFAMILY RING/U-box 125 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1964 Acco-ChrAcco09 36538402 36538968 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1964 109 186 C3H Transcription Factor Family AT2G35910 44.304 1.94e-16 72.4