Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1935 ATGAAAGAAACTAAGATAATCACAAACAAGTTTGTGAAATCGGAGTTTCTGAATGAAGCTCCGAGAGTTGTACGGATCAATGTCACCGATCACTACGCGACTGACACTTCAAGCGACGACGAATATGAAAACTTCCCGCACAGAAGAATGAAGAGGTTCGTTCACGAAATCAGAATGGAGAAATGTTCCAATTCTCCGGCGAACAGGGAGGTTGACAGAGGAGGGACCAATACCTCTGTTTTGAAACAGAAGTCCGGCATAAACAACTCCGGTAAGGTCCGACCCGTAAAATCCGAACAGGTGGGCTCGAGTGTGAAGAAGTACCGCGGCGTTCGACAGCGTCCGTGGGGAAGGTGGTCGGCGGAGATCAGAGATCCGGTGCGTGGGCAAAGGCTGTGGCTGGGCACTTTCAACACGGCGGAGGAGGCTGCGGTGTCGTACGACAGAGCAGCTATTCGTATTAAAGGTGCTAATGCTACGACGAATATTCTCCAAGTACCGCCTAAAATTGACGAAGTTATTGAAGAATCGGAATCGAAGTCAATGATGATGAACAACATTGAGCTGTTCAAAGAGCCTCGCATGTCTTCCCCAACCTCTGTTCTGAGATTCCAGTATTCTCTGGAACAGAGTTCTCTGGAAGAACACAAAACAGAGCCCGGAGAAGTAAAAGAAGAAGTAGAATCAGAGGCACGTTTCCTGCAAGACAGTAATTTATGGTTCCCAGATTCTCAATTTTCTTGTCCTGATTCAGAATATGAAGAAGCCCCTCTCCCAATGTTCTTCGACCACTTCACTTCAAACGAGAATTTGACTTTCAGGGACAGTCCATTCCATCTGGAACAAGATTTTGAATCCTGTAAATGGGACTTAGACAGCTACTTTCAAGAACAAGGCAGTACAGAAAACTGGGTTTGA 918 0.463 MKETKIITNKFVKSEFLNEAPRVVRINVTDHYATDTSSDDEYENFPHRRMKRFVHEIRMEKCSNSPANREVDRGGTNTSVLKQKSGINNSGKVRPVKSEQVGSSVKKYRGVRQRPWGRWSAEIRDPVRGQRLWLGTFNTAEEAAVSYDRAAIRIKGANATTNILQVPPKIDEVIEESESKSMMMNNIELFKEPRMSSPTSVLRFQYSLEQSSLEEHKTEPGEVKEEVESEARFLQDSNLWFPDSQFSCPDSEYEEAPLPMFFDHFTSNENLTFRDSPFHLEQDFESCKWDLDSYFQEQGSTENWV 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1935 305 PRINTS Ethylene responsive element binding protein signature 108 119 IPR001471 GO:0003700|GO:0006355
Acco09g1935 305 PRINTS Ethylene responsive element binding protein signature 130 146 IPR001471 GO:0003700|GO:0006355
Acco09g1935 305 FunFam Ethylene-responsive transcription factor 2 106 165 - -
Acco09g1935 305 ProSiteProfiles AP2/ERF domain profile. 107 167 IPR001471 GO:0003700|GO:0006355
Acco09g1935 305 MobiDBLite consensus disorder prediction 63 104 - -
Acco09g1935 305 CDD AP2 106 162 IPR001471 GO:0003700|GO:0006355
Acco09g1935 305 Gene3D AP2/ERF domain 106 164 IPR036955 GO:0003700|GO:0006355
Acco09g1935 305 Pfam AP2 domain 107 156 IPR001471 GO:0003700|GO:0006355
Acco09g1935 305 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 20 228 - -
Acco09g1935 305 SMART rav1_2 107 170 IPR001471 GO:0003700|GO:0006355
Acco09g1935 305 MobiDBLite consensus disorder prediction 69 97 - -
Acco09g1935 305 SUPERFAMILY DNA-binding domain 107 163 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1935 Acco-ChrAcco09 36311179 36312096 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1935 1 298 AP2-EREBP Transcription Factor Family AT2G46310 36.562 4.66e-45 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco09g1935 AP2 3e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g1935 09 36311179 36312096 Acco09g1935 09 36311179 36312096 ECH