Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1927 ATGGAACTGATGAGCGGAAACCTCGGCACCTACATCAAAGACGGTTTTGGACCAAGGAAACGGATACAGTTCACACTTCCAGTGGCAGTTGATCTTATGCTTCAAATTGCCAGAGGAATGGAATATCTGCATTCAAAGAAGATATATCATGGAGAGCTAAATCCTTTGAAAATTGTTGTTAAACCTAGAGGATCATCCTCAGAAGGGTACATGCATGCCAAAATCTTAGGCTTTGGGCCATCTTCAGTTAAAAACTTGAACCACAAAGTAGTTTCAAATCAGAATGGGACCCTCCCACTTGCGTGGTACGCTCCGGAAGTTCTTGAAGAGCTAGAACAAACTGGGGTACTGAGAACTCCATGTATAGCGAGAAAACGAATGTGTATAGTTTTGAAATGGTTTGCTTTGAGCTTCTTACTGGTGAAGAAATATTGGCATACCGACCCAAATCAACGGCCAAGCTTCTCTTCCATCTGCAGAATTCTTCGTTACATAAAACGGTTTCTTGTGATGAATCCTGATTGCAATAACCAATTATATTCATTAGTACCTCTGGTAGATTATTATGAAGTGGAATCAGGGCCTTTCAAAAAGTTCCCTTCTTGGGGGAGCTCTGATTCATCACCAATATCTCAAATTCCATTTCAAATGTTTGCCTACAGAGTTAGAGAGAAAGAAAAGATTGGTTTACGCTATAGGGAGAGCTCTGATATTGGAAGCGATGCTTCAGCATGTGGTGATGAACATTTTACCTTCGGTGGACCTGATGGTAAAAGCAGGAAGCTTGCACAAACCAAGAAAATGTACTCAAGAGACGTCAAACAACTAGGTTACCTTTGGAATCAGCCATGTTCAATAAGATATCCGTTAAGTTATTAG 879 0.4073 MELMSGNLGTYIKDGFGPRKRIQFTLPVAVDLMLQIARGMEYLHSKKIYHGELNPLKIVVKPRGSSSEGYMHAKILGFGPSSVKNLNHKVVSNQNGTLPLAWYAPEVLEELEQTGVLRTPCIARKRMCIVLKWFALSFLLVKKYWHTDPNQRPSFSSICRILRYIKRFLVMNPDCNNQLYSLVPLVDYYEVESGPFKKFPSWGSSDSSPISQIPFQMFAYRVREKEKIGLRYRESSDIGSDASACGDEHFTFGGPDGKSRKLAQTKKMYSRDVKQLGYLWNQPCSIRYPLSY 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1927 292 PANTHER SERINE-THREONINE PROTEIN KINASE 1 167 - -
Acco09g1927 292 SMART tyrkin_6 1 162 IPR020635 GO:0004713|GO:0006468
Acco09g1927 292 ProSiteProfiles Protein kinase domain profile. 1 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1927 292 Pfam Protein tyrosine and serine/threonine kinase 5 112 IPR001245 GO:0004672|GO:0006468
Acco09g1927 292 Gene3D Transferase(Phosphotransferase) domain 1 1 178 - -
Acco09g1927 292 SUPERFAMILY Protein kinase-like (PK-like) 1 188 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1927 Acco-ChrAcco09 36269315 36270301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1927 2 162 MAP Kinase Kinase Kinase AT1G62400 26.842 6.41e-08 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Acco09g1927 PK_Tyr_Ser-Thr 4.4e-12 CL0016