Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1926 ATGGCTGCAAATGTTGGGAAAGGGACTGAAGAACAGAAGAGGAAAGCTAGTGATTGTGTTGGGGACTGCAACGTGTCAAGTTCGTCAGGAATGAGAACATCTATGAGGAAGGATTGGCAGGAGAGCTCTTTGAATGGCAAGGGTAATGAGGATAGGCGTTTAGGTAGGTGCCTTGCTTCCCTGGCTGGATCTGAACCTCATAGTACTAGTTTGTGTTCTACAGCAAGCAATGGGCACATTGTTGAGGAGTTAACTTTTAGAAATTGTAAGAACCCGAATTCAGCTTTAGTTAGTCACACACTTAGCTCCAGACTACCTCAGTTAAACCAATTAGGTAATGAATCTGGATGTATGAAGTCAAGTAGAGAAATAGTTCCGAAGGATGGAGAAAATATATCCAACAGGCTAAGCAAGGAAACTAAGGGAAATGCTTCTAATTTTTGGAGCTCGAAGTCTCTGTCCTGTAAGAAAATGAATTATGATTCTGAAAAGATTGCTGAAAATTTAGGCAATGGGGACAAGACAATCACCTTAAGCAATGCACTTATTGTTAGCAATGCAATGCCAGACACTTCATCTACGTACAATTTTTCGCCATTGGTATTGAAACAAAAACTGAAGGGAAAGGGAGTTATCTGCAAAGATGCTGCAGACAACAGTGGCGAGCCCCATGGAGCATTTATTGGCCGGGAGGATAAAACACATGCCTTTATGGCTAAATCTCATTCTAATACACTGCTGAGAACTAATGCTTCTGCTGATGATAAGGCTTTACAAAAATTTGTCATGTCCAGCGCTGAATCCTCTGATGATGGGATCAACTTAAGAGAGTGGTTGATTTCTTCAGGTCATAAAATTAATAAACAAGAAAGACTACATATTTTTAAACGAATCCTGGAATTGGTCGATCTTGCACACTCCCAGGGAGTTGTATTGCAGGACTTAAGACCCTCTTGTTTCACTTTATTGCCTTCAAGTAAAGTTAAGTACAATGGCTCTTTAGTCCAAGGAGAGTCATACAATGTCCCAGCATGCAACATGACTAGGAAAAGGCCTATGGAAGAGGATTTCTGTTCATGCCTTAGTTTGGGTGCAAAGCAGCAAAAACTCCACAAGGAGATAAAATCTATCGGGCAGCAGCATTGCTTTAGATCTATTTGTGTCTGCACGACTAAACCAGTGAATCTTATTGATTCCCGCACAATTGGATGCCAACATTCTACCGATGGAAATCAAATAATTGATGTGACTTCCCAGTTGGAAGAGAAGTGGTATTCAAGTTCAGAAGTTCTCAATGATGGAGGCTACATATTTTCATCCAATATTTATAGCCTCGGGGTTCTGCTCTTTGAGTTGCTGTGCAATATTGAGTCATGGGAGGCACATTCAGAAGTGATGTTGGATCTGCATCAGCGAATCCTACCACCAAAATTTCTATCTGAGAATTCAAAGGAAGCTGGAGTTTGTCTTTGGCTTTTGCATCCTGAACCTTCTTCTCGTCCCAATACTAGGATGATTTCAGAATCTGAAATATTCCGTGATTTTGTGGAATTGAATTCTCAAGATGATATCTTGGTACCTGATGAAGATGAAGCTGAAACAGAGCAACTGATATATTTTTTAACTTCAATTGGAGAAGAAAAGAGAAAACATAGCGCTAAATTATCTGAAGAGCTAAGTTGCTTAGAAGAAGATATTAAAGAGGTTGAAAGGAGGTATTCACTTGGTACAACTTCATTATTTCCAGTGGTAGAAAATGGCGTTTCTAAACTCAGTAGAAACAGTTGTCATCTTCGAGATCCTTTAAGTTCTGATATTAATAGACCAATTCTGGCATCAAATGTTAATGAAGCCAGATTTATGAGAAATATCAATCAGCTAGAGACTGCATACTTCTCCATGAGATCCTGGATCCTGCTTACAGAAGATGCAGCTGTTGCACCCTATGATAAAGATGTGCTAAAAAGTAGATGGAGATTGTCTCCAGTACATAATGATAATGAGGAGCAAAGAAAAAAACGGAGATCCACAGATCGTCTTGGAACCTTCTTTGAAGGTTTATGCAAGTTTGCTCGTTACGGCAAGTTTGAAGAGTGTGACACATTAAGAAGTCATGATCTTCTTAATTCTTCCAATGTAATATGTGCATTAAGTTTTGACCGTGATGAGGACTACATTGCAGCTGCAGGAGTTTCAAAAAAAATCAAAATTTTTGATGTCAGTGCAATTTCGAGCAACTCTATTGACATCCAGTACCCAATTGTTGAGATGTCTAATAAATCAAAGCTTAGCTGTGTGTGCTGGAACAGCTATATCAAAAGCCATTTGGCATCTACTGATTATGATGGTGTAGTTCAGATGTGGGATGCGCACACTGGTCAACCGCTTTCTCAATACATGGAACACCAAAAGAGAGCATGGTCCGTTCACTTCTCTAAGTCCGACCCTAAAATGTTTGCTAGTGGAAGTGATGACTGCTCTGTGAAACTATGGAACATCAGCGAGAGAAACTCCATTGGCACCATATGGAACCCGGCCAATGTATGCTGTGTTCAGTTCTCTTCTTACTCAACAAATCTTTTAGTTTTTGGATCAGCTGATTACATAATCTACGGTTACGATCTTCGGCACACTAGAATTCCCTGGTGCACATTGTCTGGTCACGGGAAAGCTGTTAGCTATGTAAAATTTCTGGACTCTGAAACACTTGCTTCAGCTTCCACAGACAACTCTTTGAAGCTCTGGGACCTGAAGAAAACCAGCTCTCCGGGGTTGTCATCCGGTGCTTGTAGCTTAACATTTAAAGGGCATACTAACGAAAAGAATTTTGTGGGTTTGTCTGTCTTTGATGGATACATTGCATGTGGTTCAGAAACTAATGAGGTATATTGTTACCACAGATCTTTGCCAGTGCCTATCACTTCTTACAAATTTGGATCCATTGATCCCATTTCTGGACAAGAATATAATGATGATGGTAACGGACAGTTTATTTCAAGTGTCTGCTGGAGGAAGAAATCTAATATGCTTGTTGCAGCTAATTCAATTGGAGCTGTAAAACTATTGAAGATGGTCTAA 3078 0.3996 MAANVGKGTEEQKRKASDCVGDCNVSSSSGMRTSMRKDWQESSLNGKGNEDRRLGRCLASLAGSEPHSTSLCSTASNGHIVEELTFRNCKNPNSALVSHTLSSRLPQLNQLGNESGCMKSSREIVPKDGENISNRLSKETKGNASNFWSSKSLSCKKMNYDSEKIAENLGNGDKTITLSNALIVSNAMPDTSSTYNFSPLVLKQKLKGKGVICKDAADNSGEPHGAFIGREDKTHAFMAKSHSNTLLRTNASADDKALQKFVMSSAESSDDGINLREWLISSGHKINKQERLHIFKRILELVDLAHSQGVVLQDLRPSCFTLLPSSKVKYNGSLVQGESYNVPACNMTRKRPMEEDFCSCLSLGAKQQKLHKEIKSIGQQHCFRSICVCTTKPVNLIDSRTIGCQHSTDGNQIIDVTSQLEEKWYSSSEVLNDGGYIFSSNIYSLGVLLFELLCNIESWEAHSEVMLDLHQRILPPKFLSENSKEAGVCLWLLHPEPSSRPNTRMISESEIFRDFVELNSQDDILVPDEDEAETEQLIYFLTSIGEEKRKHSAKLSEELSCLEEDIKEVERRYSLGTTSLFPVVENGVSKLSRNSCHLRDPLSSDINRPILASNVNEARFMRNINQLETAYFSMRSWILLTEDAAVAPYDKDVLKSRWRLSPVHNDNEEQRKKRRSTDRLGTFFEGLCKFARYGKFEECDTLRSHDLLNSSNVICALSFDRDEDYIAAAGVSKKIKIFDVSAISSNSIDIQYPIVEMSNKSKLSCVCWNSYIKSHLASTDYDGVVQMWDAHTGQPLSQYMEHQKRAWSVHFSKSDPKMFASGSDDCSVKLWNISERNSIGTIWNPANVCCVQFSSYSTNLLVFGSADYIIYGYDLRHTRIPWCTLSGHGKAVSYVKFLDSETLASASTDNSLKLWDLKKTSSPGLSSGACSLTFKGHTNEKNFVGLSVFDGYIACGSETNEVYCYHRSLPVPITSYKFGSIDPISGQEYNDDGNGQFISSVCWRKKSNMLVAANSIGAVKLLKMV 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1926 1025 MobiDBLite consensus disorder prediction 21 42 - -
Acco09g1926 1025 SMART WD40_4 982 1023 IPR001680 GO:0005515
Acco09g1926 1025 SMART WD40_4 750 789 IPR001680 GO:0005515
Acco09g1926 1025 SMART WD40_4 835 874 IPR001680 GO:0005515
Acco09g1926 1025 SMART WD40_4 878 916 IPR001680 GO:0005515
Acco09g1926 1025 SMART WD40_4 927 966 IPR001680 GO:0005515
Acco09g1926 1025 SMART WD40_4 695 739 IPR001680 GO:0005515
Acco09g1926 1025 SMART WD40_4 792 832 IPR001680 GO:0005515
Acco09g1926 1025 Pfam WD domain, G-beta repeat 793 832 IPR001680 GO:0005515
Acco09g1926 1025 Pfam WD domain, G-beta repeat 884 916 IPR001680 GO:0005515
Acco09g1926 1025 Pfam WD domain, G-beta repeat 701 739 IPR001680 GO:0005515
Acco09g1926 1025 Coils Coil 552 572 - -
Acco09g1926 1025 ProSiteProfiles Protein kinase domain profile. 163 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1926 1025 ProSitePatterns Trp-Asp (WD) repeats signature. 903 917 IPR019775 -
Acco09g1926 1025 PANTHER PROTEIN SPA1-RELATED 2 11 1025 IPR044630 GO:0009640
Acco09g1926 1025 ProSiteProfiles Trp-Asp (WD) repeats profile. 885 918 IPR001680 GO:0005515
Acco09g1926 1025 ProSiteProfiles Trp-Asp (WD) repeats profile. 799 841 IPR001680 GO:0005515
Acco09g1926 1025 SUPERFAMILY Protein kinase-like (PK-like) 272 517 IPR011009 -
Acco09g1926 1025 SUPERFAMILY WD40 repeat-like 705 1021 IPR036322 GO:0005515
Acco09g1926 1025 MobiDBLite consensus disorder prediction 1 51 - -
Acco09g1926 1025 Gene3D Transferase(Phosphotransferase) domain 1 272 521 - -
Acco09g1926 1025 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 799 834 - -
Acco09g1926 1025 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 885 918 - -
Acco09g1926 1025 Gene3D - 683 1025 IPR015943 GO:0005515
Acco09g1926 1025 PRINTS G protein beta WD-40 repeat signature 819 833 IPR020472 -
Acco09g1926 1025 PRINTS G protein beta WD-40 repeat signature 776 790 IPR020472 -
Acco09g1926 1025 PRINTS G protein beta WD-40 repeat signature 903 917 IPR020472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1926 Acco-ChrAcco09 36260456 36266791 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1926 796 965 Miscellaneous Gene Families AT5G08390 27.326 6.45e-11 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_PEK Acco09g1926 WD40 0.0039 CL0186